iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022958

Ensembl Protein ID

EDP06430

UniProt Accession

A8IAT9; A8IAT9_CHLRE

Genbank Protein ID

EDP06430.1

Protein Name

Flagellar associated protein

Genbank Nucleotide ID

DS496115

Gene Name

FAP148; CHLREDRAFT_140842

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_140842	EDP06430	EDP06430

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.60e-46	151.3	188	225
UBD/Beta-Prp	2.40e-113	377.8	147	390

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd..tllvsGsdDgtikvWDlrtgvll 36
           gH++sv c+a ++  t++vsG+ D+ +++W+l +g++l
   Q: 188  GHEGSVLCCAVNEaaTRVVSGGEDCAVRLWSLEDGKQL 225
           8**********66789******************9986 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdkl 109
           h++ ++   f+p+++ +++++ d++++vwd+++   l ++ ghe+ v ++  ++ +   v+g+eD ++++w+l++gk++ +++++++ + +++fs sg+k+
   Q: 147  HEGLVRQAVFTPNGDRIVSSGNDNKLQVWDTFSLENLVTMTGHEGSVLCCAVNEAATRVVSGGEDCAVRLWSLEDGKQLLAFQAQDEPIKTVQFSSSGQKI 247
           55667778899****************************************************************************************** PP
   S: 110  vsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdl 209
           +s +    + vw ++ +   +  l  + + + ++v+++++ +l+  G++++ v+lWd+++ + + + t  ht++v+  +f+s +  +++++ dg++ l   
   Q: 248  LSCDVTGRVYVWSMHAEFLTN--LMRRYADNISAVTMSNDmKLCLVGCNNGRVMLWDVERRESMWEYTH-HTGRVEAAAFNSMRDMCATAGADGRIVLLFA 345
           ************999888887..666666666666666666***************************9.******************************* PP
   S: 210  qtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW....d 250
            +g+  +++ g ++++  v+fsp+der++ +++Dg ++++     
   Q: 346  DSGKQANSFLGAEEPMMTVQFSPDDERIAGCAADGKLYLYqtagS 390
           *************************************99944333 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MRTTVTLGEV TEGITCCHIA AENDFVVVGS SKGNLYTWDT DTGTVAHMYE AGHKGPVQFA 60
QVYNLPSYGR CVVSCGAKDH TVVVWDLLSG EPRALIEIKE LEHAKNLRYD VTRDGARVVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGCACGA CCGTGACGCT AGGCGAGGTG ACGGAGGGAA TCACGTGTTG CCACATTGCC 60
GCGGAAAACG ACTTTGTTGT GGTGGGCAGC TCCAAGGTGA GCGCGAAGCG TGCGGACGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0966--Cell projection
KW-0969--Cilium
KW-0181--Complete proteome
KW-0282--Flagellum
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR005821--Ion_trans_dom
IPR023302--Pept_S9A_N
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00520--Ion_trans
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0031514--C:motile cilium
GO:0005216--F:ion channel activity

KEGG

cre:CHLREDRAFT_140842

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dre-028006	Danio rerio	21.49	5.00e-21	95.10
IUUC-Loc-052090	Lepisosteus oculatus	23.24	8.00e-30	124.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence