iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pfo-096187

Ensembl Protein ID

ENSPFOP00000006321.1

UniProt Accession

A0A087XKL8; A0A087XKL8_POEFO

Genbank Protein ID

ENSPFOP00000006321

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AYCK01001624

Gene Name

RAB40C (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPFOG00000006359.1	ENSPFOT00000006332.1	ENSPFOP00000006321.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	3.00e-16	59.6	184	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC+++I++c++ + +   dkLPLP ++k++L+++++
   Q: 184  MEKFW-RPNRVFSLQDLCCRSIVSCTPVHLI---DKLPLPVAIKSHLKSFSM 231
           67899.**********************888...***************976 PP

Organism

Poecilia formosa

Protein Sequence
(Fasta)

MRGMMGTQSS PVKSYDYLLK FLLVGDSDVG KGEILESLQD GSVESPYAYS SGIDYKTTTI 60
LLDGRRVKLE LWDTSGQGRF CTIFRSYSRG AQGILLVYDI TNGWSFDGID RWIREIDEHA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTTCAGCTT TACTTCGAAT TTAACTTACC GGAAGTGACA CCGTGAATGG TGTCACTGCC 60
TGGTTGTTCC CTCACAGTTC GATCACAGCG TCGTTGGAGT CAGGGAGGCC CTCTTATTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gac-041833	Gasterosteus aculeatus	93.86	6.00e-152	530.00
IUUC-Ola-086486	Oryzias latipes	88.81	7.00e-150	523.00
IUUC-Tru-117605	Takifugu rubripes	91.51	1.00e-137	482.00
IUUC-Tni-120559	Tetraodon nigroviridis	98.11	2.00e-144	504.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence