iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014681

Ensembl Protein ID

BRADI4G43700.1

UniProt Accession

I1IUS6; I1IUS6_BRADI

Genbank Protein ID

KQJ92441.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883

Gene Name

LOC100842806; BRADI_4g43700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G43700	BRADI4G43700.1	BRADI4G43700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-09	38.0	254	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDl 30
           +s++ +++ ++ ++++++  Dgt ++W++
   Q: 254  SSISLVRWsPSgDYFLTAKFDGTFHLWET 282
           56777899*666***************96 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MPSFPPPGGV TVCEINRDLV VADSLSEDRA KEAYGDLLGM IFSPIPFQPD DLLTRHEAPA 60
PEDAVEPDAA RTSLVSTMAE SFKQMLFPSC DPKLLEEFDT QKVSWNPHKH CLAFVSGKDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGAGCT TCCCCCCGCC GGGCGGCGTC ACGGTATGCG AGATCAACCG CGACCTCGGT 60
ACGTACCCGC AACCCGCTTC CCGCGTGCTC CTTCTGCCGC ATACTCTCGA CTCATTCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR003143--Cyt_cd1_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0005635--C:nuclear envelope

KEGG

bdi:100842806

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004244	Anolis carolinensis	25.00	2.00e-25	109.00
IUUC-Ame-011057	Astyanax mexicanus	28.74	4.00e-36	145.00
IUUC-Gmo-038799	Gadus morhua	24.90	1.00e-33	137.00
IUUC-Gga-040339	Gallus gallus	27.73	2.00e-31	129.00
IUUC-Gac-042090	Gasterosteus aculeatus	25.77	6.00e-29	121.00
IUUC-Mga-059251	Meleagris gallopavo	26.39	2.00e-27	115.00
IUUC-Mlu-068047	Myotis lucifugus	25.35	1.00e-23	103.00
IUUC-Ont-072319	Oreochromis niloticus	25.43	2.00e-33	136.00
IUUC-Obr-076080	Oryza brachyantha	84.39	0.00e+00	770.00
IUUC-Ogl-077614	Oryza glaberrima	86.91	0.00e+00	755.00
IUUC-Oin-079329	Oryza indica	86.75	0.00e+00	673.00
IUUC-Osa-085732	Oryza sativa	87.13	0.00e+00	758.00
IUUC-Ola-086764	Oryzias latipes	28.99	1.00e-32	133.00
IUUC-Pfo-097211	Poecilia formosa	27.91	3.00e-36	144.00
IUUC-Stu-112394	Solanum tuberosum	61.90	5.00e-163	566.00
IUUC-Tgu-117444	Taeniopygia guttata	31.86	9.00e-12	62.00
IUUC-Tru-117902	Takifugu rubripes	24.60	7.00e-28	117.00
IUUC-Tni-120875	Tetraodon nigroviridis	26.34	6.00e-31	127.00
IUUC-Tca-121629	Theobroma cacao	63.64	8.00e-169	585.00
IUUC-Tae-125442	Triticum aestivum	93.67	0.00e+00	809.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence