iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098686

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01290177

Gene Name

VPS41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000017621.2	ENSPPYT00000020529.2	ENSPPYP00000019750.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	99.88	0.00e+00	1716.00	IUUC-Hsa-047030

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pongo abelii

Protein Sequence
(Fasta)

MAEAEEQETG SLEESTDESE EEESEEEPKL KYERLSNGVT EILQKDAASC MTVHDKFLAL 60
GTHYGKVYLL DVQGNITQKF DVSPVKINQI SLDESGEHMG VCSEDGKVQV FGLYSGEEFH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGCCTAAC AGGTCCGTCC GCTAGAAGAG ATTTCCAGGT TCAGATGAAG CTAAAACTAC 60
ATTTCCCAGA AGGCGCTGGG CCCAGTGTCT GGTTTCCTCT CATTTCCGGG TCTGTCAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR011990--TPR-like_helical_dom
IPR016902--VPS41
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50236--CHCR
PS50089--ZF_RING_2

Pfam

PF00637--Clathrin

SMART

SM00299--CLH

Gene Ontology

GO:0030123--C:AP-3 adaptor complex
GO:0071439--C:clathrin complex
GO:0030136--C:clathrin-coated vesicle
GO:0005769--C:early endosome
GO:0030897--C:HOPS complex
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0015630--C:microtubule cytoskeleton
GO:0008270--F:zinc ion binding
GO:0034058--P:endosomal vesicle fusion
GO:0008333--P:endosome to lysosome transport
GO:0006886--P:intracellular protein transport
GO:1902774--P:late endosome to lysosome transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000207	Aegilops tauschii	34.73	3.00e-136	479.00
IUUC-Aml-001435	Ailuropoda melanoleuca	97.34	0.00e+00	1677.00
IUUC-Atr-002975	Amborella trichopoda	36.96	3.00e-161	562.00
IUUC-Apl-003254	Anas platyrhynchos	91.63	0.00e+00	1594.00
IUUC-Aca-005067	Anolis carolinensis	88.99	0.00e+00	1563.00
IUUC-Aly-005839	Arabidopsis lyrata	35.97	7.00e-159	554.00
IUUC-Ath-006625	Arabidopsis thaliana	35.86	5.00e-159	555.00
IUUC-Ago-007960	Ashbya gossypii	25.39	6.00e-69	255.00
IUUC-Acl-008174	Aspergillus clavatus	29.91	9.00e-55	209.00
IUUC-Afl-008524	Aspergillus flavus	42.22	8.00e-38	152.00
IUUC-Afu-009054	Aspergillus fumigatus	28.59	1.00e-58	221.00
IUUC-Ani-009250	Aspergillus nidulans	27.53	9.00e-47	182.00
IUUC-Ang-009665	Aspergillus niger	29.14	4.00e-57	217.00
IUUC-Aor-010230	Aspergillus oryzae	42.22	8.00e-38	152.00
IUUC-Ate-010464	Aspergillus terreus	40.86	1.00e-39	159.00
IUUC-Ame-011311	Astyanax mexicanus	67.18	0.00e+00	1132.00
IUUC-Bgr-012099	Blumeria graminis	26.72	2.00e-49	191.00
IUUC-Bta-013327	Bos taurus	97.54	0.00e+00	1685.00
IUUC-Bci-013660	Botrytis cinerea	27.75	2.00e-50	194.00
IUUC-Bdi-014641	Brachypodium distachyon	36.21	5.00e-148	518.00
IUUC-Bol-015685	Brassica oleracea	35.86	3.00e-159	555.00
IUUC-Bra-016918	Brassica rapa	35.53	1.00e-157	550.00
IUUC-Cel-018385	Caenorhabditis elegans	28.44	2.00e-91	330.00
IUUC-Cja-018994	Callithrix jacchus	99.15	0.00e+00	1697.00
IUUC-Cfa-020405	Canis familiaris	97.70	0.00e+00	1680.00
IUUC-Cpo-022163	Cavia porcellus	97.10	0.00e+00	1665.00
IUUC-Cre-022626	Chlamydomonas reinhardtii	28.36	3.00e-41	163.00
IUUC-Csa-023134	Chlorocebus sabaeus	99.53	0.00e+00	1712.00
IUUC-Cho-024913	Choloepus hoffmanni	85.46	0.00e+00	1385.00
IUUC-Cin-025239	Ciona intestinalis	44.32	0.00e+00	717.00
IUUC-Cgl-026706	Colletotrichum gloeosporioides	29.29	3.00e-53	204.00
IUUC-Cne-026799	Cryptococcus neoformans	36.80	2.00e-164	572.00
IUUC-Cme-027200	Cyanidioschyzon merolae	24.10	2.00e-10	61.20
IUUC-Dre-028115	Danio rerio	82.08	0.00e+00	1436.00
IUUC-Dor-030947	Dipodomys ordii	91.22	0.00e+00	1548.00
IUUC-Dse-031544	Dothistroma septosporum	27.93	2.00e-45	178.00
IUUC-Dme-031830	Drosophila melanogaster	37.88	3.00e-155	542.00
IUUC-Ete-033051	Echinops telfairi	93.41	3.00e-143	502.00
IUUC-Eca-033501	Equus caballus	98.07	0.00e+00	1688.00
IUUC-Eeu-034555	Erinaceus europaeus	91.97	0.00e+00	887.00
IUUC-Fca-035809	Felis catus	96.84	0.00e+00	1673.00
IUUC-Fal-037056	Ficedula albicollis	92.38	0.00e+00	1598.00
IUUC-Fox-037949	Fusarium oxysporum	27.85	2.00e-48	188.00
IUUC-Fso-038282	Fusarium solani	26.78	1.00e-44	175.00
IUUC-Gmo-038540	Gadus morhua	81.02	0.00e+00	1398.00
IUUC-Ggr-039733	Gaeumannomyces graminis	29.25	3.00e-52	201.00
IUUC-Gga-040446	Gallus gallus	91.92	0.00e+00	1597.00
IUUC-Gac-041462	Gasterosteus aculeatus	81.50	0.00e+00	1412.00
IUUC-Gma-043148	Glycine max	36.59	2.00e-164	573.00
IUUC-Hsa-047030	Homo sapiens	99.88	0.00e+00	1716.00
IUUC-Hvu-047693	Hordeum vulgare	36.08	8.00e-149	521.00
IUUC-Itr-048318	Ictidomys tridecemlineatus	97.03	0.00e+00	1664.00
IUUC-Kpa-049224	Komagataella pastoris	23.76	7.00e-55	209.00
IUUC-Lch-049444	Latimeria chalumnae	81.34	0.00e+00	1382.00
IUUC-Lpe-050942	Leersia perrieri	33.94	3.00e-129	456.00
IUUC-Loc-052260	Lepisosteus oculatus	81.40	0.00e+00	1431.00
IUUC-Lma-053173	Leptosphaeria maculans	26.97	2.00e-49	191.00
IUUC-Laf-054185	Loxodonta africana	97.34	0.00e+00	1675.00
IUUC-Mcc-054816	Macaca mulatta	99.53	0.00e+00	1712.00
IUUC-Meu-056483	Macropus eugenii	73.38	0.00e+00	652.00
IUUC-Mor-056979	Magnaporthe oryzae	27.39	1.00e-52	202.00
IUUC-Mpo-057312	Magnaporthe poae	29.35	9.00e-52	199.00
IUUC-Mtr-057630	Medicago truncatula	36.20	2.00e-161	563.00
IUUC-Mla-058930	Melampsora laricipopulina	32.76	2.00e-24	105.00
IUUC-Mga-059942	Meleagris gallopavo	91.79	0.00e+00	1584.00
IUUC-Mvi-060386	Microbotryum violaceum	36.19	1.00e-158	553.00
IUUC-Mmr-060640	Microcebus murinus	98.91	0.00e+00	1700.00
IUUC-Mdo-062934	Monodelphis domestica	85.59	0.00e+00	1428.00
IUUC-Mmu-063488	Mus musculus	97.22	0.00e+00	1685.00
IUUC-Mac-064975	Musa acuminata	37.19	3.00e-157	549.00
IUUC-Mpu-065777	Mustela putorius furo	97.94	0.00e+00	1683.00
IUUC-Mlu-068052	Myotis lucifugus	96.98	0.00e+00	1670.00
IUUC-Nfi-068436	Neosartorya fischeri	28.87	8.00e-60	226.00
IUUC-Ncr-068840	Neurospora crassa	29.32	3.00e-58	221.00
IUUC-Nle-070063	Nomascus leucogenys	99.53	0.00e+00	1705.00
IUUC-Opr-070385	Ochotona princeps	87.42	0.00e+00	1456.00
IUUC-Ont-072367	Oreochromis niloticus	81.29	0.00e+00	1406.00
IUUC-Oan-073085	Ornithorhynchus anatinus	91.67	0.00e+00	1575.00
IUUC-Ocu-074672	Oryctolagus cuniculus	97.94	0.00e+00	1682.00
IUUC-Oba-075574	Oryza barthii	36.54	1.00e-154	540.00
IUUC-Obr-076203	Oryza brachyantha	36.55	4.00e-154	538.00
IUUC-Ogl-077909	Oryza glaberrima	36.54	1.00e-154	540.00
IUUC-Ogu-078053	Oryza glumaepatula	36.13	1.00e-151	530.00
IUUC-Oin-079700	Oryza indica	36.54	1.00e-154	540.00
IUUC-Olo-080707	Oryza longistaminata	37.18	8.00e-161	560.00
IUUC-Oni-082754	Oryza nivara	36.47	1.00e-153	537.00
IUUC-Opu-083854	Oryza punctata	36.47	1.00e-153	536.00
IUUC-Oru-085071	Oryza rufipogon	36.24	1.00e-152	534.00
IUUC-Osa-085370	Oryza sativa	36.54	1.00e-154	540.00
IUUC-Ola-086362	Oryzias latipes	79.16	0.00e+00	1371.00
IUUC-Oga-088078	Otolemur garnettii	98.17	0.00e+00	1677.00
IUUC-Oar-089679	Ovis aries	97.66	0.00e+00	1687.00
IUUC-Ptr-091680	Pan troglodytes	99.88	0.00e+00	1716.00
IUUC-Pan-092816	Papio anubis	99.83	0.00e+00	1219.00
IUUC-Psi-093890	Pelodiscus sinensis	90.98	0.00e+00	1595.00
IUUC-Pma-094654	Petromyzon marinus	65.18	0.00e+00	1122.00
IUUC-Pno-095071	Phaeosphaeria nodorum	28.24	5.00e-57	216.00
IUUC-Ppa-095198	Physcomitrella patens	34.62	4.00e-146	512.00
IUUC-Pfo-097465	Poecilia formosa	79.98	0.00e+00	1389.00
IUUC-Pop-100066	Populus trichocarpa	36.35	3.00e-162	566.00
IUUC-Pca-100990	Procavia capensis	87.18	0.00e+00	1459.00
IUUC-Ppe-101500	Prunus persica	37.00	3.00e-164	572.00
IUUC-Pva-102809	Pteropus vampyrus	97.42	0.00e+00	1685.00
IUUC-Pgr-103404	Puccinia graminis	32.97	6.00e-144	505.00
IUUC-Ptt-103952	Puccinia triticina	31.74	5.00e-133	468.00
IUUC-Pte-104216	Pyrenophora teres	28.10	5.00e-57	216.00
IUUC-Rno-105949	Rattus norvegicus	97.28	0.00e+00	1494.00
IUUC-Sce-106462	Saccharomyces cerevisiae	24.79	1.00e-57	218.00
IUUC-Sha-106689	Sarcophilus harrisii	93.11	0.00e+00	1624.00
IUUC-Sja-107696	Schizosaccharomyces japonicus	30.15	3.00e-97	349.00
IUUC-Spo-108173	Schizosaccharomyces pombe	29.31	6.00e-105	375.00
IUUC-Smo-109505	Selaginella moellendorffii	37.00	4.00e-150	525.00
IUUC-Sit-110176	Setaria italica	36.38	5.00e-159	555.00
IUUC-Sly-111671	Solanum lycopersicum	34.89	1.00e-162	567.00
IUUC-Sar-113073	Sorex araneus	83.20	0.00e+00	1288.00
IUUC-Sbi-114139	Sorghum bicolor	37.19	3.00e-153	535.00
IUUC-Sre-115158	Sporisorium reilianum	36.01	4.00e-167	582.00
IUUC-Ssc-115894	Sus scrofa	95.67	0.00e+00	1652.00
IUUC-Tgu-117481	Taeniopygia guttata	92.02	0.00e+00	1596.00
IUUC-Tru-118468	Takifugu rubripes	79.43	0.00e+00	1381.00
IUUC-Tni-120478	Tetraodon nigroviridis	78.84	0.00e+00	1374.00
IUUC-Tca-121780	Theobroma cacao	36.43	8.00e-162	564.00
IUUC-Tre-121900	Trichoderma reesei	28.15	8.00e-55	209.00
IUUC-Tvi-122343	Trichoderma virens	27.87	4.00e-55	210.00
IUUC-Tae-123578	Triticum aestivum	36.61	2.00e-151	530.00
IUUC-Tur-126430	Triticum urartu	35.84	4.00e-143	501.00
IUUC-Tme-127007	Tuber melanosporum	29.07	1.00e-61	231.00
IUUC-Tbe-128073	Tupaia belangeri	88.99	0.00e+00	1509.00
IUUC-Ttr-128879	Tursiops truncatus	97.07	0.00e+00	1667.00
IUUC-Uma-129356	Ustilago maydis	35.49	6.00e-168	585.00
IUUC-Vda-129676	Verticillium dahliae	28.89	4.00e-54	207.00
IUUC-Vvi-131744	Vitis vinifera	36.03	4.00e-160	558.00
IUUC-Xtr-132093	Xenopus tropicalis	81.14	0.00e+00	1395.00
IUUC-Xma-133199	Xiphophorus maculatus	80.80	0.00e+00	1388.00
IUUC-Yli-134385	Yarrowia lipolytica	27.05	1.00e-75	278.00
IUUC-Zma-135567	Zea mays	36.93	2.00e-150	526.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence