iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114804

Ensembl Protein ID

Sb05g004850.1

UniProt Accession

C5Y633; C5Y633_SORBI

Genbank Protein ID

EES08084.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G059600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g004850	Sb05g004850.1	Sb05g004850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-19	67.9	304	332

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDl 30
           + +++++f +d  +l++ ++Dg ++v+D+
   Q: 304  GAINGISFsPDgAYLATVGRDGYLRVFDF 332
           679******999****************6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASAAGSGGG AGAGAGGLKT YFKTPEGRHK LQYEKTHSPA VVHYNHSGKT VSQMTVAYLK 60
EKPAGQGSTP STPSAGSGMR SAAARLLGTG NGSRALSFGN NGTSRAVSGN SRMGGGIGVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAATAATC AGCTCGTTTC TCTCTCTCTC TCTCTCTCTC TCTCTCTGCG CCTCCGACTC 60
CGAAGCTCCG TTCTCCTCTC CCGCATCCAC CGCCGTCTCA TCCCCCCAAA TCCGACCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016579--P:protein deubiquitination

KEGG

sbi:SORBI_05g004850

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001749	Ailuropoda melanoleuca	36.62	1.00e-53	203.00
IUUC-Apl-003710	Anas platyrhynchos	38.24	1.00e-52	200.00
IUUC-Aca-004914	Anolis carolinensis	35.71	3.00e-53	202.00
IUUC-Afu-008994	Aspergillus fumigatus	32.95	2.00e-52	199.00
IUUC-Ang-009614	Aspergillus niger	32.05	3.00e-56	211.00
IUUC-Ame-010700	Astyanax mexicanus	36.57	3.00e-52	199.00
IUUC-Bta-013293	Bos taurus	35.77	1.00e-51	196.00
IUUC-Bdi-014283	Brachypodium distachyon	81.65	0.00e+00	850.00
IUUC-Cel-018407	Caenorhabditis elegans	33.11	9.00e-39	154.00
IUUC-Cja-019007	Callithrix jacchus	34.67	4.00e-51	194.00
IUUC-Cfa-020697	Canis familiaris	40.83	1.00e-40	159.00
IUUC-Cpo-022464	Cavia porcellus	41.74	4.00e-50	191.00
IUUC-Csa-023594	Chlorocebus sabaeus	36.06	3.00e-53	202.00
IUUC-Cin-025617	Ciona intestinalis	36.72	3.00e-28	118.00
IUUC-Csv-026120	Ciona savignyi	38.12	2.00e-30	124.00
IUUC-Cme-027228	Cyanidioschyzon merolae	25.00	4.00e-16	79.70
IUUC-Dre-027892	Danio rerio	35.71	8.00e-52	197.00
IUUC-Dme-031790	Drosophila melanogaster	33.66	2.00e-43	170.00
IUUC-Eca-033704	Equus caballus	39.09	1.00e-51	196.00
IUUC-Eeu-034912	Erinaceus europaeus	45.00	6.00e-39	154.00
IUUC-Fca-036140	Felis catus	34.73	4.00e-54	204.00
IUUC-Fal-037163	Ficedula albicollis	36.68	2.00e-53	202.00
IUUC-Gmo-039220	Gadus morhua	37.04	5.00e-52	197.00
IUUC-Ggr-039757	Gaeumannomyces graminis	29.57	4.00e-55	208.00
IUUC-Gga-040768	Gallus gallus	36.68	2.00e-53	202.00
IUUC-Gac-042612	Gasterosteus aculeatus	36.75	7.00e-52	197.00
IUUC-Ggo-045322	Gorilla gorilla	34.93	3.00e-51	195.00
IUUC-Hsa-046440	Homo sapiens	34.67	6.00e-52	197.00
IUUC-Hvu-047057	Hordeum vulgare	78.53	4.00e-141	493.00
IUUC-Itr-048055	Ictidomys tridecemlineatus	35.49	2.00e-52	199.00
IUUC-Lch-049678	Latimeria chalumnae	37.14	3.00e-53	202.00
IUUC-Loc-051970	Lepisosteus oculatus	37.14	2.00e-53	202.00
IUUC-Laf-053660	Loxodonta africana	36.06	3.00e-53	202.00
IUUC-Mcc-055671	Macaca mulatta	36.66	3.00e-53	201.00
IUUC-Meu-056033	Macropus eugenii	43.40	2.00e-44	173.00
IUUC-Mpo-057472	Magnaporthe poae	29.20	2.00e-54	206.00
IUUC-Mla-059179	Melampsora laricipopulina	28.17	2.00e-35	143.00
IUUC-Mga-059701	Meleagris gallopavo	38.24	1.00e-52	199.00
IUUC-Mvi-060521	Microbotryum violaceum	33.23	4.00e-42	165.00
IUUC-Mmr-060982	Microcebus murinus	34.93	1.00e-51	196.00
IUUC-Mdo-062998	Monodelphis domestica	35.49	3.00e-53	201.00
IUUC-Mmu-064199	Mus musculus	35.49	2.00e-53	202.00
IUUC-Mpu-066310	Mustela putorius furo	35.77	8.00e-53	200.00
IUUC-Mlu-068216	Myotis lucifugus	36.62	7.00e-54	204.00
IUUC-Nfi-068256	Neosartorya fischeri	32.96	4.00e-58	218.00
IUUC-Opr-071024	Ochotona princeps	34.65	4.00e-48	185.00
IUUC-Ont-072202	Oreochromis niloticus	37.32	2.00e-52	199.00
IUUC-Oan-073075	Ornithorhynchus anatinus	37.50	9.00e-53	200.00
IUUC-Ocu-073978	Oryctolagus cuniculus	36.06	2.00e-53	202.00
IUUC-Ola-086647	Oryzias latipes	37.04	9.00e-52	197.00
IUUC-Oga-088879	Otolemur garnettii	38.12	3.00e-52	199.00
IUUC-Oar-089333	Ovis aries	36.34	4.00e-53	201.00
IUUC-Ptr-090538	Pan troglodytes	35.20	5.00e-52	198.00
IUUC-Pan-092473	Papio anubis	35.49	2.00e-53	202.00
IUUC-Psi-094013	Pelodiscus sinensis	35.71	2.00e-53	202.00
IUUC-Pfo-096374	Poecilia formosa	36.26	2.00e-51	196.00
IUUC-Pab-098503	Pongo abelii	34.66	3.00e-54	205.00
IUUC-Pca-100287	Procavia capensis	33.91	4.00e-52	198.00
IUUC-Pva-102826	Pteropus vampyrus	36.62	8.00e-54	204.00
IUUC-Pgr-103681	Puccinia graminis	30.92	2.00e-32	133.00
IUUC-Rno-106076	Rattus norvegicus	35.21	1.00e-52	199.00
IUUC-Ssl-108563	Sclerotinia sclerotiorum	35.03	3.00e-44	172.00
IUUC-Sit-109904	Setaria italica	95.62	0.00e+00	995.00
IUUC-Sly-111266	Solanum lycopersicum	63.92	0.00e+00	662.00
IUUC-Stu-112818	Solanum tuberosum	66.40	0.00e+00	663.00
IUUC-Sar-113582	Sorex araneus	40.09	3.00e-44	172.00
IUUC-Ssc-116048	Sus scrofa	34.73	4.00e-55	207.00
IUUC-Tru-117529	Takifugu rubripes	37.04	7.00e-52	197.00
IUUC-Tni-120859	Tetraodon nigroviridis	37.04	1.00e-52	200.00
IUUC-Tae-125602	Triticum aestivum	80.80	0.00e+00	841.00
IUUC-Tbe-127985	Tupaia belangeri	35.31	2.00e-43	169.00
IUUC-Ttr-128936	Tursiops truncatus	34.73	8.00e-54	204.00
IUUC-Vvi-130973	Vitis vinifera	63.90	0.00e+00	696.00
IUUC-Xtr-131864	Xenopus tropicalis	36.57	5.00e-52	198.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence