iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000001463.1	ENSORLT00000001812.1	ENSORLP00000001811.1
ENSORLG00000001463.1	ENSORLT00000001814.1	ENSORLP00000001813.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-20	72.1	536	569

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gHtd+ ++l+  ++   +v+++ D+ +++WD  +
   Q: 536  GHTDELWGLDVhPSmEQFVTCAQDKLVQLWDSNS 569
           8*********9977799**************665 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

ARDSFQMFGN FYMKITTLGF CGSPHPDDTV SASSNMDMED RVSHLEQRLQ LQEDEIQLLK 60
AALADALRRL GCCEEQSHAF WGLTLNFPTK VRQLLQSLPS RPLSNGYVQH KRLLSSPSSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGAGAGATT CTTTCCAAAT GTTTGGAAAC TTTTACATGA AAATAACCAC TTTAGTGAGG 60
GTTTGCCGTG TGTTTACTGC CACCCCCTAG TGGTCATTTA TGTAACTGCA TCTTTAGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR005108--HELP
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002155	Ailuropoda melanoleuca	62.39	0.00e+00	942.00
IUUC-Ame-011647	Astyanax mexicanus	77.69	0.00e+00	1175.00
IUUC-Cho-024509	Choloepus hoffmanni	42.00	7.00e-112	397.00
IUUC-Dre-028734	Danio rerio	76.80	0.00e+00	1183.00
IUUC-Gmo-039389	Gadus morhua	82.21	0.00e+00	1168.00
IUUC-Gac-042643	Gasterosteus aculeatus	84.14	0.00e+00	1242.00
IUUC-Loc-052518	Lepisosteus oculatus	73.56	0.00e+00	1095.00
IUUC-Meu-056664	Macropus eugenii	66.39	0.00e+00	884.00
IUUC-Ont-071258	Oreochromis niloticus	85.27	0.00e+00	1278.00
IUUC-Pfo-096717	Poecilia formosa	84.65	0.00e+00	1277.00
IUUC-Pca-101070	Procavia capensis	59.34	0.00e+00	766.00
IUUC-Tru-117809	Takifugu rubripes	80.36	0.00e+00	1259.00
IUUC-Tni-120815	Tetraodon nigroviridis	80.36	0.00e+00	1255.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence