iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116144

Ensembl Protein ID

ENSSSCP00000021982.1

UniProt Accession

I3LD53; I3LD53_PIG

Genbank Protein ID

ENSSSCP00000021982

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP340373

Gene Name

WDR74

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000028025.1	ENSSSCT00000027556.1	ENSSSCP00000021982.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-12	47.1	43	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           + v++l++   + t +++G+ D t+k++++ +g
   Q: 43   EAVSALCWgaGGeTQILVGCADRTVKLFSTEEG 75
           5799*****95559**************97666 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAAAEARWNH VWVGTDTGIL KGVNLQRKQA VNYTAAGQPQ REEAVSALCW GAGGETQILV 60
GCADRTVKLF STEEGRFQGQ RHCPGGEGTF RGLAQVDGTL ITCVESGILR VWHDNDKEAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCTGCGCCG GAAGTGCGAG CCGGATCCGG ATCTCCGTTA TGGCGGCTGC CGAGGCGCGG 60
TGGAATCATG TGTGGGTCGG CACCGACACC GGCATCCTGA AAGGTGAGTG ATGGGCCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR023302--Pept_S9A_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0030687--C:preribosome, large subunit precursor
GO:0042273--P:ribosomal large subunit biogenesis

KEGG

ssc:100627951

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000787	Aegilops tauschii	32.56	1.00e-25	110.00
IUUC-Aml-001460	Ailuropoda melanoleuca	90.98	0.00e+00	729.00
IUUC-Atr-002657	Amborella trichopoda	36.78	2.00e-26	112.00
IUUC-Aly-006380	Arabidopsis lyrata	34.78	1.00e-28	120.00
IUUC-Ath-007686	Arabidopsis thaliana	34.20	2.00e-27	116.00
IUUC-Ame-011942	Astyanax mexicanus	55.28	9.00e-112	396.00
IUUC-Bta-013382	Bos taurus	93.25	0.00e+00	747.00
IUUC-Bdi-014280	Brachypodium distachyon	33.88	2.00e-28	119.00
IUUC-Bra-017855	Brassica rapa	40.23	6.00e-29	121.00
IUUC-Cja-018933	Callithrix jacchus	91.15	0.00e+00	708.00
IUUC-Cfa-020634	Canis familiaris	90.10	0.00e+00	718.00
IUUC-Cpo-022089	Cavia porcellus	83.82	1.00e-178	618.00
IUUC-Csa-023835	Chlorocebus sabaeus	91.41	0.00e+00	729.00
IUUC-Cho-024385	Choloepus hoffmanni	69.74	2.00e-86	311.00
IUUC-Cin-025691	Ciona intestinalis	44.94	5.00e-75	274.00
IUUC-Dre-028473	Danio rerio	56.01	8.00e-106	376.00
IUUC-Dno-029687	Dasypus novemcinctus	88.65	0.00e+00	695.00
IUUC-Dor-030529	Dipodomys ordii	88.70	8.00e-126	442.00
IUUC-Dme-031982	Drosophila melanogaster	31.29	1.00e-34	140.00
IUUC-Ete-032407	Echinops telfairi	61.60	6.00e-109	387.00
IUUC-Eca-033792	Equus caballus	85.49	3.00e-179	620.00
IUUC-Fca-036584	Felis catus	91.69	0.00e+00	736.00
IUUC-Gmo-039064	Gadus morhua	56.78	1.00e-102	366.00
IUUC-Gac-042170	Gasterosteus aculeatus	54.32	2.00e-101	361.00
IUUC-Gma-044150	Glycine max	32.17	1.00e-26	113.00
IUUC-Ggo-044955	Gorilla gorilla	91.67	0.00e+00	732.00
IUUC-Hsa-046615	Homo sapiens	90.89	0.00e+00	725.00
IUUC-Hvu-047119	Hordeum vulgare	32.94	7.00e-29	121.00
IUUC-Itr-048987	Ictidomys tridecemlineatus	90.27	0.00e+00	697.00
IUUC-Kpa-049188	Komagataella pastoris	31.58	2.00e-19	89.70
IUUC-Lch-050396	Latimeria chalumnae	57.82	1.00e-123	435.00
IUUC-Laf-054015	Loxodonta africana	88.25	0.00e+00	677.00
IUUC-Mcc-055589	Macaca mulatta	91.93	0.00e+00	733.00
IUUC-Meu-056160	Macropus eugenii	61.39	2.00e-118	418.00
IUUC-Mtr-057719	Medicago truncatula	32.07	2.00e-28	120.00
IUUC-Mmr-060801	Microcebus murinus	90.89	0.00e+00	728.00
IUUC-Mdo-062069	Monodelphis domestica	78.42	7.00e-157	546.00
IUUC-Mmu-063586	Mus musculus	89.06	0.00e+00	674.00
IUUC-Mpu-066542	Mustela putorius furo	92.71	0.00e+00	721.00
IUUC-Mlu-067520	Myotis lucifugus	76.17	7.00e-155	539.00
IUUC-Nle-069422	Nomascus leucogenys	90.62	0.00e+00	723.00
IUUC-Opr-070402	Ochotona princeps	76.75	4.00e-96	343.00
IUUC-Ont-072078	Oreochromis niloticus	59.38	5.00e-109	387.00
IUUC-Ocu-073886	Oryctolagus cuniculus	89.43	0.00e+00	676.00
IUUC-Obr-076206	Oryza brachyantha	34.73	3.00e-33	136.00
IUUC-Ogl-077112	Oryza glaberrima	34.63	8.00e-33	134.00
IUUC-Ogu-078172	Oryza glumaepatula	36.23	3.00e-28	119.00
IUUC-Oin-080070	Oryza indica	34.63	1.00e-32	134.00
IUUC-Olo-080534	Oryza longistaminata	33.33	4.00e-30	126.00
IUUC-Ome-081869	Oryza meridionalis	33.33	9.00e-30	124.00
IUUC-Opu-083828	Oryza punctata	33.97	2.00e-30	126.00
IUUC-Oru-084690	Oryza rufipogon	33.33	2.00e-30	126.00
IUUC-Ola-087342	Oryzias latipes	54.78	3.00e-95	341.00
IUUC-Oga-088865	Otolemur garnettii	89.18	0.00e+00	699.00
IUUC-Oar-090030	Ovis aries	92.73	0.00e+00	739.00
IUUC-Pan-092461	Papio anubis	91.67	0.00e+00	729.00
IUUC-Psi-093061	Pelodiscus sinensis	59.22	4.00e-130	457.00
IUUC-Pma-094281	Petromyzon marinus	52.19	2.00e-101	361.00
IUUC-Ppa-095623	Physcomitrella patens	31.88	3.00e-32	132.00
IUUC-Pfo-097074	Poecilia formosa	58.12	3.00e-97	348.00
IUUC-Pab-098290	Pongo abelii	91.93	0.00e+00	734.00
IUUC-Pop-099602	Populus trichocarpa	38.51	8.00e-27	114.00
IUUC-Pca-100383	Procavia capensis	87.50	0.00e+00	655.00
IUUC-Ppe-101867	Prunus persica	32.33	6.00e-27	115.00
IUUC-Pva-103218	Pteropus vampyrus	77.86	4.00e-172	597.00
IUUC-Rno-105494	Rattus norvegicus	88.83	0.00e+00	703.00
IUUC-Sha-107127	Sarcophilus harrisii	75.00	6.00e-157	546.00
IUUC-Sit-110466	Setaria italica	37.44	6.00e-28	118.00
IUUC-Sbi-113854	Sorghum bicolor	35.37	2.00e-28	119.00
IUUC-Tru-118516	Takifugu rubripes	50.52	3.00e-102	364.00
IUUC-Tni-120527	Tetraodon nigroviridis	57.10	5.00e-104	370.00
IUUC-Tae-123391	Triticum aestivum	31.88	2.00e-28	119.00
IUUC-Tur-126054	Triticum urartu	32.94	3.00e-28	119.00
IUUC-Tbe-127232	Tupaia belangeri	69.53	6.00e-141	493.00
IUUC-Ttr-128529	Tursiops truncatus	93.25	0.00e+00	742.00
IUUC-Vpa-130703	Vicugna pacos	94.97	5.00e-97	347.00
IUUC-Vvi-131680	Vitis vinifera	37.68	7.00e-29	121.00
IUUC-Xtr-132802	Xenopus tropicalis	47.00	1.00e-95	342.00
IUUC-Xma-133396	Xiphophorus maculatus	50.47	4.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence