iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gmo-039622

Ensembl Protein ID

ENSGMOP00000003592.1

UniProt Accession

V5KTG0; V5KTG0_GADMO

Genbank Protein ID

AHA33528.1

Protein Name

Recombination activating protein 1

Genbank Nucleotide ID

KC442200

Gene Name

rag1; RAG1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGMOG00000003395.1	ENSGMOT00000003699.1	ENSGMOP00000003592.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	55.08	0.00e+00	1174.00	IUUC-Hsa-045964
E3 activity/RING/RING	54.45	0.00e+00	1168.00	IUUC-Mmu-064297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Gadus morhua

Protein Sequence
(Fasta)

TMAVERPETD CPRSSMPDEL QHPHLKFSHW KFKLFRVRST DEDTMASETA PRIAAPPEVL 60
PAPAAAAAID PWSGEEGHLG LPGSVMKLCL GGKSKENVEG PGHRVDRKLQ EMDLHMEKLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCATGGCAG TGGAGAGAGG CAGTGTCCAG GCGGAGCAAC CGGAGACCGA CTGCCCGCGG 60
TCATCCATGC CGGATGAGCT GCAGCATCCC CACCTGAAGT TCTCCCACTG GAAGTTCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR024627--RAG1

Pfam

PF12940--RAG1

Gene Ontology

GO:0004519--F:endonuclease activity
GO:0043565--F:sequence-specific DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0033151--P:V(D)J recombination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001206	Ailuropoda melanoleuca	56.33	0.00e+00	1155.00
IUUC-Apl-003271	Anas platyrhynchos	55.36	0.00e+00	1165.00
IUUC-Aca-004400	Anolis carolinensis	54.20	0.00e+00	1158.00
IUUC-Ame-011295	Astyanax mexicanus	68.24	0.00e+00	1463.00
IUUC-Bta-012421	Bos taurus	56.32	0.00e+00	1184.00
IUUC-Cja-019891	Callithrix jacchus	55.13	0.00e+00	1134.00
IUUC-Cfa-020740	Canis familiaris	55.80	0.00e+00	1171.00
IUUC-Cpo-021800	Cavia porcellus	56.06	0.00e+00	1119.00
IUUC-Csa-024203	Chlorocebus sabaeus	52.06	0.00e+00	981.00
IUUC-Dre-028416	Danio rerio	67.68	0.00e+00	1435.00
IUUC-Dno-029101	Dasypus novemcinctus	55.63	0.00e+00	1144.00
IUUC-Eca-033385	Equus caballus	56.31	0.00e+00	1149.00
IUUC-Fca-036545	Felis catus	55.77	0.00e+00	1155.00
IUUC-Fal-037208	Ficedula albicollis	54.51	0.00e+00	1147.00
IUUC-Gga-041182	Gallus gallus	54.77	0.00e+00	1128.00
IUUC-Gac-041682	Gasterosteus aculeatus	71.65	0.00e+00	1548.00
IUUC-Ggo-044510	Gorilla gorilla	54.94	0.00e+00	1137.00
IUUC-Hsa-045964	Homo sapiens	55.22	0.00e+00	1141.00
IUUC-Itr-048862	Ictidomys tridecemlineatus	55.67	0.00e+00	1143.00
IUUC-Lch-050041	Latimeria chalumnae	57.14	0.00e+00	1189.00
IUUC-Loc-052464	Lepisosteus oculatus	63.83	0.00e+00	1376.00
IUUC-Laf-053544	Loxodonta africana	54.87	0.00e+00	1147.00
IUUC-Mcc-054867	Macaca mulatta	55.65	0.00e+00	1132.00
IUUC-Meu-055986	Macropus eugenii	53.88	0.00e+00	1046.00
IUUC-Mga-059262	Meleagris gallopavo	54.73	0.00e+00	1131.00
IUUC-Mdo-062686	Monodelphis domestica	55.51	0.00e+00	1192.00
IUUC-Mmu-064297	Mus musculus	55.39	0.00e+00	1176.00
IUUC-Mpu-066027	Mustela putorius furo	55.93	0.00e+00	1147.00
IUUC-Mlu-067885	Myotis lucifugus	55.20	0.00e+00	1153.00
IUUC-Nle-070073	Nomascus leucogenys	55.31	0.00e+00	1137.00
IUUC-Ont-071400	Oreochromis niloticus	71.61	0.00e+00	1570.00
IUUC-Oan-072920	Ornithorhynchus anatinus	72.50	2.00e-180	624.00
IUUC-Ocu-074616	Oryctolagus cuniculus	55.44	0.00e+00	1149.00
IUUC-Ola-086828	Oryzias latipes	69.74	0.00e+00	1521.00
IUUC-Oga-088675	Otolemur garnettii	64.29	1.00e-109	389.00
IUUC-Oar-090380	Ovis aries	56.24	0.00e+00	1181.00
IUUC-Ptr-090648	Pan troglodytes	55.32	0.00e+00	1144.00
IUUC-Pan-092036	Papio anubis	55.65	0.00e+00	1134.00
IUUC-Psi-093130	Pelodiscus sinensis	54.95	0.00e+00	1169.00
IUUC-Pfo-097273	Poecilia formosa	70.12	0.00e+00	1521.00
IUUC-Pca-100134	Procavia capensis	66.40	0.00e+00	1014.00
IUUC-Rno-105632	Rattus norvegicus	56.09	0.00e+00	1185.00
IUUC-Sha-107238	Sarcophilus harrisii	55.29	0.00e+00	1202.00
IUUC-Sar-113591	Sorex araneus	73.45	3.00e-164	572.00
IUUC-Ssc-115720	Sus scrofa	55.29	0.00e+00	1140.00
IUUC-Tgu-117030	Taeniopygia guttata	54.89	0.00e+00	1155.00
IUUC-Tru-117669	Takifugu rubripes	67.81	0.00e+00	1413.00
IUUC-Tsy-119578	Tarsius syrichta	54.92	0.00e+00	1138.00
IUUC-Tni-120073	Tetraodon nigroviridis	69.40	0.00e+00	1490.00
IUUC-Tbe-128029	Tupaia belangeri	45.00	1.00e-133	470.00
IUUC-Ttr-128677	Tursiops truncatus	71.20	2.00e-169	589.00
IUUC-Vpa-130346	Vicugna pacos	70.43	0.00e+00	676.00
IUUC-Xtr-132442	Xenopus tropicalis	69.31	6.00e-82	296.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence