iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-116129

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU571230

Gene Name

NUP43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000004105.2	ENSSSCT00000004540.2	ENSSSCP00000004438.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-16	60.1	260	299

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+++++ ++f  s+ ++l ++s Dg++  WD +t+v++ks
   Q: 260  HEAEMWEVHFhpSNpDHLFTCSEDGSLWHWDASTDVPEKS 299
           99999******8778********************99986 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MEEIYAKFVS QKISKTRWRP LSSGSLQTAE TFATGSWDNE ENYVSLWSIG DLGNVDSDGG 60
FEGDHQLLCD IRHHGDVMDL QFFDQERIVA ASSTGCVTVF LHHPNNQTLS VSQQWTTAHY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCTGCTTC TGCCTCTACC TCCCCCGGGT TGCTTTCAGC ATGGAGGAAA TTTATGCCAA 60
GTTTGTGTCA CAGAAAATCA GCAAGACCCG CTGGCGACCG CTATCTTCGG GGAGCCTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring

KEGG

ssc:100154567

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001593	Ailuropoda melanoleuca	93.42	0.00e+00	712.00
IUUC-Atr-002526	Amborella trichopoda	25.78	1.00e-10	60.10
IUUC-Apl-003533	Anas platyrhynchos	74.93	5.00e-144	503.00
IUUC-Aca-004965	Anolis carolinensis	72.11	1.00e-163	568.00
IUUC-Aly-006431	Arabidopsis lyrata	30.18	8.00e-14	70.90
IUUC-Ath-007253	Arabidopsis thaliana	30.36	9.00e-14	70.90
IUUC-Ame-011694	Astyanax mexicanus	63.86	4.00e-123	433.00
IUUC-Bta-013161	Bos taurus	93.16	0.00e+00	746.00
IUUC-Bol-016489	Brassica oleracea	30.09	1.00e-07	51.60
IUUC-Bra-017838	Brassica rapa	27.27	3.00e-08	52.40
IUUC-Cel-018567	Caenorhabditis elegans	31.16	2.00e-09	56.20
IUUC-Cja-020000	Callithrix jacchus	81.14	0.00e+00	629.00
IUUC-Cfa-021112	Canis familiaris	94.21	0.00e+00	749.00
IUUC-Cpo-022095	Cavia porcellus	88.42	0.00e+00	697.00
IUUC-Csa-023460	Chlorocebus sabaeus	95.53	0.00e+00	731.00
IUUC-Cho-024279	Choloepus hoffmanni	92.06	2.00e-177	614.00
IUUC-Cin-025360	Ciona intestinalis	35.15	5.00e-61	227.00
IUUC-Csv-026301	Ciona savignyi	36.93	7.00e-54	203.00
IUUC-Dre-028097	Danio rerio	62.43	2.00e-138	484.00
IUUC-Dno-029131	Dasypus novemcinctus	91.58	0.00e+00	723.00
IUUC-Dor-030496	Dipodomys ordii	81.36	0.00e+00	633.00
IUUC-Dme-031834	Drosophila melanogaster	27.61	2.00e-43	169.00
IUUC-Ete-032448	Echinops telfairi	90.46	1.00e-167	582.00
IUUC-Eca-034409	Equus caballus	92.11	0.00e+00	734.00
IUUC-Eeu-035343	Erinaceus europaeus	78.42	6.00e-160	556.00
IUUC-Fca-036177	Felis catus	95.53	0.00e+00	756.00
IUUC-Fal-037657	Ficedula albicollis	70.26	8.00e-158	549.00
IUUC-Gmo-038946	Gadus morhua	67.02	8.00e-146	509.00
IUUC-Gga-041070	Gallus gallus	74.47	6.00e-165	572.00
IUUC-Gac-042442	Gasterosteus aculeatus	67.37	2.00e-149	521.00
IUUC-Ggo-045223	Gorilla gorilla	94.47	0.00e+00	751.00
IUUC-Hsa-045956	Homo sapiens	94.74	0.00e+00	754.00
IUUC-Itr-048116	Ictidomys tridecemlineatus	93.70	0.00e+00	746.00
IUUC-Lch-050035	Latimeria chalumnae	71.43	5.00e-163	566.00
IUUC-Laf-053404	Loxodonta africana	89.47	0.00e+00	702.00
IUUC-Mcc-055813	Macaca mulatta	95.79	0.00e+00	734.00
IUUC-Meu-056388	Macropus eugenii	75.68	2.00e-160	557.00
IUUC-Mga-060193	Meleagris gallopavo	72.63	1.00e-169	588.00
IUUC-Mmr-060818	Microcebus murinus	93.68	0.00e+00	744.00
IUUC-Mdo-062822	Monodelphis domestica	88.95	0.00e+00	706.00
IUUC-Mmu-064182	Mus musculus	92.11	0.00e+00	733.00
IUUC-Mac-065317	Musa acuminata	26.67	1.00e-09	57.00
IUUC-Mpu-066865	Mustela putorius furo	94.71	0.00e+00	674.00
IUUC-Mlu-067329	Myotis lucifugus	94.47	0.00e+00	707.00
IUUC-Nle-069093	Nomascus leucogenys	95.26	0.00e+00	756.00
IUUC-Opr-070481	Ochotona princeps	83.46	0.00e+00	659.00
IUUC-Ont-072445	Oreochromis niloticus	67.63	2.00e-151	528.00
IUUC-Oan-073029	Ornithorhynchus anatinus	76.84	5.00e-175	606.00
IUUC-Ocu-074275	Oryctolagus cuniculus	91.84	0.00e+00	734.00
IUUC-Ola-086862	Oryzias latipes	63.76	7.00e-136	476.00
IUUC-Oga-088952	Otolemur garnettii	93.93	0.00e+00	748.00
IUUC-Oar-089300	Ovis aries	93.95	0.00e+00	751.00
IUUC-Ptr-091389	Pan troglodytes	95.00	0.00e+00	755.00
IUUC-Pan-092174	Papio anubis	95.53	0.00e+00	732.00
IUUC-Psi-093326	Pelodiscus sinensis	77.71	4.00e-163	566.00
IUUC-Pfo-096331	Poecilia formosa	65.95	2.00e-147	514.00
IUUC-Pab-098306	Pongo abelii	94.74	0.00e+00	754.00
IUUC-Pop-099166	Populus trichocarpa	29.37	8.00e-11	60.80
IUUC-Pca-100455	Procavia capensis	87.33	5.00e-77	281.00
IUUC-Ppe-101380	Prunus persica	30.73	1.00e-11	63.90
IUUC-Pva-102578	Pteropus vampyrus	95.26	0.00e+00	720.00
IUUC-Rno-105146	Rattus norvegicus	91.58	0.00e+00	699.00
IUUC-Sha-107640	Sarcophilus harrisii	89.76	0.00e+00	714.00
IUUC-Sly-111767	Solanum lycopersicum	29.31	2.00e-10	59.70
IUUC-Stu-112515	Solanum tuberosum	29.31	2.00e-10	59.70
IUUC-Sar-113681	Sorex araneus	95.41	1.00e-110	393.00
IUUC-Sbi-113809	Sorghum bicolor	25.26	1.00e-05	43.90
IUUC-Tgu-117456	Taeniopygia guttata	69.48	1.00e-82	298.00
IUUC-Tru-117630	Takifugu rubripes	68.15	2.00e-100	357.00
IUUC-Tsy-119331	Tarsius syrichta	94.21	0.00e+00	751.00
IUUC-Tni-120077	Tetraodon nigroviridis	65.34	3.00e-139	488.00
IUUC-Tca-121814	Theobroma cacao	28.32	7.00e-10	58.20
IUUC-Tae-123605	Triticum aestivum	26.32	9.00e-11	60.80
IUUC-Tbe-127359	Tupaia belangeri	84.35	0.00e+00	645.00
IUUC-Ttr-128461	Tursiops truncatus	95.53	0.00e+00	726.00
IUUC-Vpa-130162	Vicugna pacos	95.26	0.00e+00	720.00
IUUC-Vvi-131114	Vitis vinifera	26.87	7.00e-12	64.70
IUUC-Xtr-132446	Xenopus tropicalis	69.13	5.00e-157	546.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence