iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017027

Ensembl Protein ID

Bra015016.1-P

UniProt Accession

M4DEU4; M4DEU4_BRARP

Protein Name

PHD finger protein ING

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra015016	Bra015016.1	Bra015016.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.90e-09	37.6	178	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr.ewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C + + +e  ++ C++  C+ ewfH++C++l+   ++p+ + w+Cp+C 
   Q: 178  TYC-ICNQVSYGE--MIACDNneCKiEWFHFGCVGLK---DQPKGK-WYCPDCA 224
           69*.*******99..******9***************...999997.******6 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSFADEFESN LVSLAHVLQK KYALLRDLDK SLQENQRQNE QRCEKEIEDI RRGRTANVTP 60
NAHFSEEAID EQKHSVRIAD EKVALAMQAY DLVDMHVQQL DQYMKKSNEQ MRREKENASA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCATTCG CCGACGAATT TGAATCTAGT AAGCAATCTT TCTTCTCGAT TCCCCTTTCA 60
TTATTCAATT AGTTTGTGAA ATTTGATTCT CCCTGTTACG TTAGCAATGC GATTTTCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12998--ING

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001338	Ailuropoda melanoleuca	32.67	9.00e-35	139.00
IUUC-Atr-002906	Amborella trichopoda	52.74	5.00e-66	243.00
IUUC-Apl-004097	Anas platyrhynchos	32.49	3.00e-34	137.00
IUUC-Aca-004593	Anolis carolinensis	31.17	1.00e-34	139.00
IUUC-Aly-005815	Arabidopsis lyrata	77.54	4.00e-85	306.00
IUUC-Ath-006765	Arabidopsis thaliana	76.27	4.00e-85	306.00
IUUC-Acl-008091	Aspergillus clavatus	59.26	2.00e-18	87.00
IUUC-Ate-010297	Aspergillus terreus	57.41	8.00e-18	85.50
IUUC-Ame-011260	Astyanax mexicanus	31.28	2.00e-31	128.00
IUUC-Bta-012699	Bos taurus	32.42	1.00e-34	139.00
IUUC-Bdi-014504	Brachypodium distachyon	52.44	2.00e-66	244.00
IUUC-Bol-015245	Brassica oleracea	98.71	6.00e-106	376.00
IUUC-Cel-018700	Caenorhabditis elegans	41.07	2.00e-05	45.10
IUUC-Cja-019988	Callithrix jacchus	31.17	3.00e-33	134.00
IUUC-Cfa-021282	Canis familiaris	31.17	3.00e-33	134.00
IUUC-Cpo-022011	Cavia porcellus	31.17	4.00e-34	137.00
IUUC-Cre-022920	Chlamydomonas reinhardtii	40.13	3.00e-27	115.00
IUUC-Csa-023203	Chlorocebus sabaeus	31.17	3.00e-33	134.00
IUUC-Cho-024577	Choloepus hoffmanni	81.82	1.00e-28	119.00
IUUC-Cin-025479	Ciona intestinalis	34.48	6.00e-34	137.00
IUUC-Csv-026288	Ciona savignyi	30.08	4.00e-31	127.00
IUUC-Cne-027005	Cryptococcus neoformans	54.00	4.00e-14	72.00
IUUC-Cme-027118	Cyanidioschyzon merolae	44.44	3.00e-03	37.00
IUUC-Dre-027430	Danio rerio	33.62	8.00e-36	143.00
IUUC-Dno-029766	Dasypus novemcinctus	32.10	4.00e-33	134.00
IUUC-Dor-030315	Dipodomys ordii	81.82	4.00e-28	118.00
IUUC-Dse-031323	Dothistroma septosporum	59.26	2.00e-18	87.80
IUUC-Dme-032200	Drosophila melanogaster	68.25	6.00e-28	117.00
IUUC-Ete-032510	Echinops telfairi	66.67	3.00e-27	115.00
IUUC-Eca-033565	Equus caballus	31.17	6.00e-34	137.00
IUUC-Eeu-034948	Erinaceus europaeus	32.93	4.00e-33	134.00
IUUC-Fca-036368	Felis catus	31.17	2.00e-33	135.00
IUUC-Fal-037120	Ficedula albicollis	32.49	3.00e-34	137.00
IUUC-Fox-037925	Fusarium oxysporum	62.22	1.00e-17	84.30
IUUC-Gga-040771	Gallus gallus	31.17	1.00e-34	139.00
IUUC-Gma-044339	Glycine max	60.67	2.00e-77	281.00
IUUC-Ggo-045559	Gorilla gorilla	31.17	3.00e-33	134.00
IUUC-Hsa-046852	Homo sapiens	31.17	3.00e-33	134.00
IUUC-Hvu-047046	Hordeum vulgare	46.64	3.00e-58	217.00
IUUC-Itr-047978	Ictidomys tridecemlineatus	31.17	4.00e-34	137.00
IUUC-Kpa-049229	Komagataella pastoris	52.94	2.00e-15	75.10
IUUC-Lch-050397	Latimeria chalumnae	31.30	6.00e-30	124.00
IUUC-Lpe-050822	Leersia perrieri	51.01	3.00e-64	238.00
IUUC-Loc-052725	Lepisosteus oculatus	32.93	7.00e-33	133.00
IUUC-Lma-053234	Leptosphaeria maculans	58.93	2.00e-17	84.00
IUUC-Laf-054057	Loxodonta africana	31.17	2.00e-33	135.00
IUUC-Mcc-055212	Macaca mulatta	30.92	7.00e-33	133.00
IUUC-Meu-056248	Macropus eugenii	81.82	4.00e-28	118.00
IUUC-Mtr-058089	Medicago truncatula	61.13	9.00e-73	266.00
IUUC-Mga-059967	Meleagris gallopavo	32.08	3.00e-34	137.00
IUUC-Mmr-060843	Microcebus murinus	32.93	5.00e-35	140.00
IUUC-Mdo-062282	Monodelphis domestica	31.09	2.00e-31	128.00
IUUC-Mmu-064093	Mus musculus	31.17	4.00e-34	137.00
IUUC-Mac-064625	Musa acuminata	55.14	3.00e-74	270.00
IUUC-Mpu-066302	Mustela putorius furo	32.37	1.00e-31	129.00
IUUC-Mlu-068192	Myotis lucifugus	31.54	1.00e-31	129.00
IUUC-Nle-069062	Nomascus leucogenys	31.17	3.00e-33	134.00
IUUC-Opr-070207	Ochotona princeps	32.24	2.00e-32	132.00
IUUC-Ont-072446	Oreochromis niloticus	32.68	1.00e-35	142.00
IUUC-Oan-073652	Ornithorhynchus anatinus	32.44	1.00e-30	125.00
IUUC-Ocu-074235	Oryctolagus cuniculus	31.17	3.00e-33	134.00
IUUC-Obr-076266	Oryza brachyantha	51.01	2.00e-65	241.00
IUUC-Ogl-077118	Oryza glaberrima	73.24	9.00e-34	136.00
IUUC-Oin-079049	Oryza indica	73.24	9.00e-34	136.00
IUUC-Ome-081291	Oryza meridionalis	73.24	8.00e-34	136.00
IUUC-Oni-082218	Oryza nivara	73.24	9.00e-34	136.00
IUUC-Opu-084171	Oryza punctata	50.21	8.00e-63	233.00
IUUC-Osa-085563	Oryza sativa	73.24	8.00e-34	136.00
IUUC-Ola-087103	Oryzias latipes	32.08	1.00e-32	132.00
IUUC-Olu-087851	Ostreococcus lucimarinus	33.49	6.00e-19	87.00
IUUC-Oga-089123	Otolemur garnettii	31.17	2.00e-33	135.00
IUUC-Oar-089524	Ovis aries	32.42	1.00e-34	139.00
IUUC-Ptr-090908	Pan troglodytes	31.58	3.00e-33	134.00
IUUC-Pan-092837	Papio anubis	32.67	1.00e-34	139.00
IUUC-Psi-093828	Pelodiscus sinensis	32.63	4.00e-34	137.00
IUUC-Pma-094144	Petromyzon marinus	68.18	5.00e-27	112.00
IUUC-Pab-098253	Pongo abelii	30.08	6.00e-29	120.00
IUUC-Pop-099415	Populus trichocarpa	59.84	8.00e-75	272.00
IUUC-Pca-100600	Procavia capensis	68.75	2.00e-27	115.00
IUUC-Ppe-101441	Prunus persica	61.98	4.00e-77	280.00
IUUC-Pva-102282	Pteropus vampyrus	34.18	8.00e-35	139.00
IUUC-Pte-104284	Pyrenophora teres	57.14	4.00e-17	83.20
IUUC-Pyt-104787	Pyrenophora triticirepentis	58.93	3.00e-17	83.60
IUUC-Rno-105178	Rattus norvegicus	33.06	9.00e-36	142.00
IUUC-Sce-106421	Saccharomyces cerevisiae	42.31	6.00e-06	44.70
IUUC-Sha-107031	Sarcophilus harrisii	34.04	2.00e-31	129.00
IUUC-Smo-109441	Selaginella moellendorffii	41.03	2.00e-47	181.00
IUUC-Sit-109827	Setaria italica	50.41	6.00e-63	233.00
IUUC-Sly-111750	Solanum lycopersicum	61.83	3.00e-74	270.00
IUUC-Stu-112250	Solanum tuberosum	61.83	3.00e-74	270.00
IUUC-Sar-113193	Sorex araneus	66.67	2.00e-27	116.00
IUUC-Sbi-114826	Sorghum bicolor	50.82	8.00e-64	236.00
IUUC-Sre-115124	Sporisorium reilianum	45.56	2.00e-22	100.00
IUUC-Ssc-115797	Sus scrofa	32.10	2.00e-32	132.00
IUUC-Tgu-117270	Taeniopygia guttata	31.17	1.00e-34	139.00
IUUC-Tru-118253	Takifugu rubripes	32.81	3.00e-36	144.00
IUUC-Tsy-119035	Tarsius syrichta	66.67	4.00e-27	115.00
IUUC-Tni-119775	Tetraodon nigroviridis	33.47	3.00e-31	128.00
IUUC-Tca-121597	Theobroma cacao	64.23	7.00e-79	286.00
IUUC-Tre-121950	Trichoderma reesei	65.45	1.00e-19	91.70
IUUC-Tvi-122341	Trichoderma virens	61.11	2.00e-15	74.70
IUUC-Tae-123043	Triticum aestivum	48.86	4.00e-67	247.00
IUUC-Tbe-127558	Tupaia belangeri	32.67	9.00e-35	139.00
IUUC-Ttr-128672	Tursiops truncatus	81.82	2.00e-28	119.00
IUUC-Uma-129581	Ustilago maydis	60.71	4.00e-22	99.80
IUUC-Vpa-130063	Vicugna pacos	71.43	3.00e-25	108.00
IUUC-Vvi-131487	Vitis vinifera	61.04	1.00e-74	272.00
IUUC-Xtr-132189	Xenopus tropicalis	33.19	3.00e-34	138.00
IUUC-Xma-133297	Xiphophorus maculatus	32.52	4.00e-34	137.00
IUUC-Yli-134326	Yarrowia lipolytica	53.23	9.00e-19	87.00
IUUC-Zma-135298	Zea mays	53.33	7.00e-30	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence