iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Uma-129495

Ensembl Protein ID

KIS72265

UniProt Accession

Q4PGT8; A0A0D1EDI4; CMR1_USTMA

Genbank Protein ID

KIS72265.1

Protein Name

DNA damage-binding protein CMR1

Genbank Nucleotide ID

CM003140

Gene Name

UMAG_00675

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
UMAG_00675	KIS72265	KIS72265

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-14	51.0	258	283

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf...sdtllvsGsdDgtik 26
           ++vtc++f   + + ++s+s+D t++
   Q: 258  SPVTCIKFdpvNHNSVLSSSYDSTVR 283
           78*******965599**********8 PP

Organism

Ustilago maydis

Functional Description
(View)

DNA-binding protein that binds to both single- and double-stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.

Protein Sequence
(Fasta)

MIESNDYEQE RLKNIRENER LMKELGVMGG SSTIGGPSSK RTTPTKPKKQ ATPKKKPDTT 60
PTRIMPSRSS ARLAGHEADS ETLKRKYEEE AEEARKVAEA AKRARHQPFD LSGMTGGELE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTGAAT CCAACGACTA CGAGCAAGAG CGGCTCAAAA ACATCAGGGA GAATGAACGC 60
CTGATGAAGG AGCTAGGTGT CATGGGCGGC TCTTCGACCA TCGGTGGCCC ATCATCCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0227--DNA damage
KW-0238--DNA-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR033052--Cmr1/WDR76
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0003677--F:DNA binding
GO:0006974--P:cellular response to DNA damage stimulus

KEGG

uma:UMAG_00675

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000625	Aegilops tauschii	27.10	8.00e-11	59.30
IUUC-Atr-002605	Amborella trichopoda	19.34	2.00e-09	55.50
IUUC-Apl-003441	Anas platyrhynchos	40.45	2.00e-12	65.10
IUUC-Aca-004997	Anolis carolinensis	37.86	3.00e-16	77.80
IUUC-Aly-005444	Arabidopsis lyrata	23.99	4.00e-16	77.80
IUUC-Ath-007550	Arabidopsis thaliana	24.41	4.00e-16	77.80
IUUC-Ago-007715	Ashbya gossypii	21.95	1.00e-18	86.30
IUUC-Acl-008370	Aspergillus clavatus	27.98	6.00e-43	166.00
IUUC-Afl-008586	Aspergillus flavus	28.25	1.00e-25	109.00
IUUC-Afu-008907	Aspergillus fumigatus	29.09	3.00e-31	127.00
IUUC-Ani-009415	Aspergillus nidulans	27.88	3.00e-28	117.00
IUUC-Ang-009597	Aspergillus niger	25.54	3.00e-16	78.20
IUUC-Aor-010197	Aspergillus oryzae	28.25	1.00e-25	109.00
IUUC-Ate-010280	Aspergillus terreus	27.85	5.00e-38	150.00
IUUC-Bgr-012236	Blumeria graminis	30.85	9.00e-37	146.00
IUUC-Bta-013059	Bos taurus	33.57	3.00e-12	65.50
IUUC-Bci-013796	Botrytis cinerea	26.41	1.00e-37	149.00
IUUC-Bra-018032	Brassica rapa	24.90	7.00e-12	63.90
IUUC-Cja-019043	Callithrix jacchus	31.43	1.00e-11	62.80
IUUC-Cfa-021103	Canis familiaris	32.81	1.00e-12	66.60
IUUC-Cpo-021508	Cavia porcellus	30.00	5.00e-11	61.20
IUUC-Cre-022967	Chlamydomonas reinhardtii	47.73	2.00e-05	42.70
IUUC-Csa-023555	Chlorocebus sabaeus	32.03	1.00e-11	62.80
IUUC-Cho-024931	Choloepus hoffmanni	50.00	3.00e-04	38.90
IUUC-Cin-025651	Ciona intestinalis	23.05	3.00e-10	58.50
IUUC-Cgl-026604	Colletotrichum gloeosporioides	28.61	4.00e-29	120.00
IUUC-Cne-027093	Cryptococcus neoformans	31.55	5.00e-49	187.00
IUUC-Cme-027238	Cyanidioschyzon merolae	37.63	3.00e-07	48.50
IUUC-Dre-027441	Danio rerio	40.00	7.00e-11	60.50
IUUC-Dno-029575	Dasypus novemcinctus	32.06	6.00e-12	63.90
IUUC-Dor-030554	Dipodomys ordii	28.63	5.00e-14	70.90
IUUC-Dse-031299	Dothistroma septosporum	27.37	5.00e-28	117.00
IUUC-Ete-033038	Echinops telfairi	22.92	8.00e-09	53.10
IUUC-Eca-034027	Equus caballus	31.03	3.00e-11	61.60
IUUC-Eeu-035234	Erinaceus europaeus	36.47	2.00e-09	55.80
IUUC-Fca-035892	Felis catus	32.81	2.00e-11	62.40
IUUC-Fal-036986	Ficedula albicollis	42.17	4.00e-10	57.80
IUUC-Fox-037750	Fusarium oxysporum	26.94	2.00e-35	141.00
IUUC-Fso-038198	Fusarium solani	30.23	9.00e-27	113.00
IUUC-Gga-040479	Gallus gallus	39.76	4.00e-11	60.80
IUUC-Gac-042043	Gasterosteus aculeatus	25.73	8.00e-11	59.70
IUUC-Gma-042915	Glycine max	22.76	2.00e-16	78.60
IUUC-Ggo-045290	Gorilla gorilla	33.57	2.00e-12	65.90
IUUC-Hsa-047021	Homo sapiens	32.14	3.00e-12	65.10
IUUC-Hvu-047193	Hordeum vulgare	28.26	9.00e-08	49.70
IUUC-Itr-047914	Ictidomys tridecemlineatus	34.29	5.00e-13	67.80
IUUC-Kpa-049275	Komagataella pastoris	21.89	1.00e-25	109.00
IUUC-Lch-049718	Latimeria chalumnae	36.43	9.00e-15	73.60
IUUC-Loc-052565	Lepisosteus oculatus	22.37	2.00e-14	72.00
IUUC-Lma-053276	Leptosphaeria maculans	27.90	6.00e-38	150.00
IUUC-Laf-053970	Loxodonta africana	32.06	3.00e-12	65.50
IUUC-Mcc-054740	Macaca mulatta	32.03	2.00e-11	62.40
IUUC-Meu-056546	Macropus eugenii	32.14	4.00e-11	61.60
IUUC-Mtr-058451	Medicago truncatula	22.83	1.00e-13	68.90
IUUC-Mla-058906	Melampsora laricipopulina	30.07	1.00e-40	159.00
IUUC-Mga-059328	Meleagris gallopavo	39.76	5.00e-11	60.50
IUUC-Mvi-060555	Microbotryum violaceum	29.30	3.00e-30	125.00
IUUC-Mmr-061520	Microcebus murinus	32.86	9.00e-12	63.50
IUUC-Mdo-062812	Monodelphis domestica	34.75	3.00e-13	68.60
IUUC-Mmu-064011	Mus musculus	34.38	8.00e-12	63.50
IUUC-Mpu-066486	Mustela putorius furo	33.61	5.00e-12	64.30
IUUC-Mlu-067721	Myotis lucifugus	32.82	3.00e-13	68.60
IUUC-Nfi-068314	Neosartorya fischeri	30.00	3.00e-30	124.00
IUUC-Ncr-068896	Neurospora crassa	28.22	1.00e-29	122.00
IUUC-Nle-069369	Nomascus leucogenys	32.14	3.00e-12	65.10
IUUC-Opr-070975	Ochotona princeps	31.91	7.00e-13	67.40
IUUC-Ont-072528	Oreochromis niloticus	42.35	1.00e-10	59.70
IUUC-Oan-072955	Ornithorhynchus anatinus	34.71	2.00e-13	68.60
IUUC-Ocu-074561	Oryctolagus cuniculus	31.21	4.00e-13	67.80
IUUC-Ola-087208	Oryzias latipes	41.18	2.00e-10	58.50
IUUC-Olu-087680	Ostreococcus lucimarinus	24.23	7.00e-09	53.50
IUUC-Oga-088104	Otolemur garnettii	33.57	5.00e-13	67.80
IUUC-Oar-090157	Ovis aries	32.03	3.00e-12	65.10
IUUC-Ptr-091615	Pan troglodytes	31.43	5.00e-12	64.30
IUUC-Pan-092212	Papio anubis	32.03	1.00e-11	62.80
IUUC-Psi-092950	Pelodiscus sinensis	28.43	4.00e-16	77.80
IUUC-Pma-094625	Petromyzon marinus	29.34	8.00e-10	55.80
IUUC-Pno-094824	Phaeosphaeria nodorum	29.79	6.00e-36	143.00
IUUC-Pfo-096922	Poecilia formosa	23.55	2.00e-12	65.90
IUUC-Pab-097591	Pongo abelii	32.14	3.00e-12	65.10
IUUC-Pop-099337	Populus trichocarpa	23.12	8.00e-19	86.70
IUUC-Pca-101025	Procavia capensis	26.39	5.00e-13	67.80
IUUC-Ppe-101256	Prunus persica	22.62	5.00e-09	54.30
IUUC-Pva-102453	Pteropus vampyrus	35.11	3.00e-13	68.60
IUUC-Pgr-103436	Puccinia graminis	27.01	1.00e-53	202.00
IUUC-Ptt-103899	Puccinia triticina	26.79	1.00e-50	192.00
IUUC-Pte-104258	Pyrenophora teres	28.92	1.00e-33	135.00
IUUC-Pyt-104625	Pyrenophora triticirepentis	28.08	5.00e-32	130.00
IUUC-Rno-104843	Rattus norvegicus	34.62	9.00e-13	67.00
IUUC-Sce-106189	Saccharomyces cerevisiae	24.32	3.00e-18	85.10
IUUC-Sha-106672	Sarcophilus harrisii	23.71	2.00e-15	75.90
IUUC-Smo-109660	Selaginella moellendorffii	26.28	4.00e-15	73.60
IUUC-Sly-111853	Solanum lycopersicum	22.87	5.00e-12	63.90
IUUC-Stu-112482	Solanum tuberosum	22.79	3.00e-12	64.70
IUUC-Sar-113537	Sorex araneus	31.71	3.00e-08	51.60
IUUC-Sre-114960	Sporisorium reilianum	80.89	0.00e+00	926.00
IUUC-Ssc-115568	Sus scrofa	34.29	8.00e-14	70.50
IUUC-Tgu-117276	Taeniopygia guttata	28.16	7.00e-12	63.50
IUUC-Tru-117559	Takifugu rubripes	37.65	1.00e-07	46.60
IUUC-Tsy-119234	Tarsius syrichta	37.65	2.00e-09	55.50
IUUC-Tni-120358	Tetraodon nigroviridis	23.32	6.00e-10	57.00
IUUC-Tca-121273	Theobroma cacao	20.64	8.00e-10	57.00
IUUC-Tre-121932	Trichoderma reesei	28.26	8.00e-28	116.00
IUUC-Tvi-122567	Trichoderma virens	28.33	6.00e-36	143.00
IUUC-Tae-123866	Triticum aestivum	26.89	2.00e-10	58.20
IUUC-Tur-125970	Triticum urartu	24.54	1.00e-09	55.80
IUUC-Tme-126958	Tuber melanosporum	27.70	9.00e-22	96.30
IUUC-Tbe-127425	Tupaia belangeri	32.14	3.00e-12	65.10
IUUC-Ttr-129123	Tursiops truncatus	32.81	8.00e-12	63.90
IUUC-Vda-129981	Verticillium dahliae	27.93	1.00e-34	139.00
IUUC-Vpa-130437	Vicugna pacos	33.57	7.00e-14	70.50
IUUC-Vvi-131430	Vitis vinifera	23.88	2.00e-12	65.50
IUUC-Xtr-132670	Xenopus tropicalis	28.88	1.00e-21	96.30
IUUC-Xma-133375	Xiphophorus maculatus	47.06	5.00e-12	63.90
IUUC-Yli-134341	Yarrowia lipolytica	26.05	2.00e-35	142.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence