iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027356

Ensembl Protein ID

ENSDARP00000124510.1

UniProt Accession

F8W338; F8W338_DANRE

Genbank Protein ID

ENSDARP00000124510

Protein Name

LIM domain-binding 2a

Genbank Nucleotide ID

BX088536

Gene Name

ldb2a

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000019579.11	ENSDART00000149571.2	ENSDARP00000124510.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	63.28	3.00e-124	442.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Danio rerio

Protein Sequence
(Fasta)

MRSSPPPCAA PPASCAPLRV RPLTAAVSRR LEILHARCTD AEASALLQTA HGINMSNPPH 60
DPFYSSPFGP FYRRHSPYMV QPEYRIYEMN KRLQSRTEES DSLWWDAFAT EFFEEDATLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCAAACGT CAACATGAAG AACCAGTCTC TTTTCTATGG GATGGTAGGA GTTGCTTGGC 60
TCCCCCTCGC CAGTGTTCCA GTGCAGCCCG CGGCCATCCA ATGAGAAGCA GCCCGCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030174--LDB2
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0030514--P:negative regulation of BMP signaling pathway
GO:1900108--P:negative regulation of nodal signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	23.18	1.60e-02	35.40
IUUC-Aml-002031	Ailuropoda melanoleuca	70.66	1.00e-145	509.00
IUUC-Atr-003083	Amborella trichopoda	19.37	3.00e-03	37.70
IUUC-Apl-004210	Anas platyrhynchos	70.00	6.00e-116	410.00
IUUC-Aca-005241	Anolis carolinensis	71.12	1.00e-146	512.00
IUUC-Aly-006204	Arabidopsis lyrata	24.40	3.00e-05	44.70
IUUC-Ath-007339	Arabidopsis thaliana	24.40	3.00e-05	44.30
IUUC-Ame-010910	Astyanax mexicanus	79.39	1.00e-112	400.00
IUUC-Bgr-012180	Blumeria graminis	21.74	7.00e-07	49.70
IUUC-Bta-012596	Bos taurus	78.96	1.00e-177	615.00
IUUC-Bci-013927	Botrytis cinerea	28.57	1.00e-08	55.50
IUUC-Bol-015721	Brassica oleracea	23.95	1.00e-05	45.40
IUUC-Bra-017183	Brassica rapa	23.95	1.00e-05	45.80
IUUC-Cel-018189	Caenorhabditis elegans	33.77	3.00e-28	120.00
IUUC-Cja-019586	Callithrix jacchus	79.59	8.00e-178	616.00
IUUC-Cfa-021188	Canis familiaris	70.66	1.00e-145	509.00
IUUC-Cpo-022350	Cavia porcellus	70.05	6.00e-143	500.00
IUUC-Csa-023816	Chlorocebus sabaeus	70.32	1.00e-144	506.00
IUUC-Cho-024958	Choloepus hoffmanni	75.73	2.00e-88	319.00
IUUC-Cin-025721	Ciona intestinalis	49.10	1.00e-91	329.00
IUUC-Csv-026065	Ciona savignyi	51.20	1.00e-95	343.00
IUUC-Dno-029918	Dasypus novemcinctus	71.01	3.00e-142	498.00
IUUC-Dor-030634	Dipodomys ordii	70.05	1.00e-144	505.00
IUUC-Dse-031245	Dothistroma septosporum	25.83	7.00e-04	39.70
IUUC-Dme-031667	Drosophila melanogaster	60.62	4.00e-122	431.00
IUUC-Ete-032246	Echinops telfairi	79.07	7.00e-176	609.00
IUUC-Eca-034015	Equus caballus	79.59	1.00e-178	619.00
IUUC-Eeu-034902	Erinaceus europaeus	70.05	1.00e-144	505.00
IUUC-Fca-035903	Felis catus	69.79	4.00e-144	504.00
IUUC-Fal-037407	Ficedula albicollis	80.00	2.00e-174	604.00
IUUC-Gmo-039466	Gadus morhua	71.78	7.00e-149	520.00
IUUC-Ggr-040030	Gaeumannomyces graminis	25.34	5.00e-05	43.50
IUUC-Gga-040214	Gallus gallus	71.51	3.00e-148	518.00
IUUC-Gac-042214	Gasterosteus aculeatus	70.13	3.00e-149	521.00
IUUC-Gma-042794	Glycine max	23.11	1.00e-07	52.40
IUUC-Ggo-044988	Gorilla gorilla	79.59	2.00e-179	621.00
IUUC-Hsa-046092	Homo sapiens	80.26	2.00e-180	624.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	70.05	3.00e-144	504.00
IUUC-Lch-049895	Latimeria chalumnae	73.38	5.00e-94	337.00
IUUC-Lpe-050806	Leersia perrieri	25.95	6.00e-04	40.00
IUUC-Loc-052845	Lepisosteus oculatus	68.72	1.00e-145	509.00
IUUC-Lma-053090	Leptosphaeria maculans	25.98	2.00e-06	48.10
IUUC-Laf-054538	Loxodonta africana	69.45	8.00e-148	516.00
IUUC-Mcc-055116	Macaca mulatta	94.74	1.00e-145	508.00
IUUC-Meu-056777	Macropus eugenii	64.71	3.00e-128	451.00
IUUC-Mpo-057376	Magnaporthe poae	25.69	7.00e-05	43.10
IUUC-Mtr-058142	Medicago truncatula	22.67	2.00e-06	48.50
IUUC-Mga-059716	Meleagris gallopavo	79.22	2.00e-173	602.00
IUUC-Mmr-060649	Microcebus murinus	79.84	1.00e-179	622.00
IUUC-Mdo-062535	Monodelphis domestica	79.84	2.00e-176	611.00
IUUC-Mmu-064036	Mus musculus	80.26	0.00e+00	627.00
IUUC-Mac-065338	Musa acuminata	21.25	1.00e-03	39.30
IUUC-Mpu-065719	Mustela putorius furo	70.05	3.00e-144	504.00
IUUC-Mlu-067219	Myotis lucifugus	69.41	6.00e-142	497.00
IUUC-Ncr-068691	Neurospora crassa	26.47	8.00e-04	39.70
IUUC-Nle-068983	Nomascus leucogenys	79.40	2.00e-168	584.00
IUUC-Opr-070467	Ochotona princeps	70.05	1.00e-144	505.00
IUUC-Ont-071566	Oreochromis niloticus	69.52	9.00e-150	523.00
IUUC-Oan-073368	Ornithorhynchus anatinus	70.32	6.00e-144	503.00
IUUC-Ocu-074854	Oryctolagus cuniculus	79.57	1.00e-171	595.00
IUUC-Ola-086364	Oryzias latipes	68.98	4.00e-149	521.00
IUUC-Oga-088235	Otolemur garnettii	79.33	3.00e-176	611.00
IUUC-Oar-089547	Ovis aries	70.66	1.00e-145	509.00
IUUC-Ptr-091423	Pan troglodytes	79.59	8.00e-178	616.00
IUUC-Pan-092378	Papio anubis	70.32	5.00e-145	507.00
IUUC-Psi-093638	Pelodiscus sinensis	95.14	7.00e-146	510.00
IUUC-Pma-094384	Petromyzon marinus	66.67	2.00e-52	197.00
IUUC-Pno-095027	Phaeosphaeria nodorum	23.18	7.00e-07	49.70
IUUC-Pfo-096031	Poecilia formosa	70.70	4.00e-151	527.00
IUUC-Pab-097886	Pongo abelii	79.40	2.00e-168	584.00
IUUC-Pop-099430	Populus trichocarpa	24.22	6.00e-05	43.50
IUUC-Pca-101138	Procavia capensis	70.05	1.00e-144	505.00
IUUC-Ppe-101293	Prunus persica	22.83	3.00e-06	47.00
IUUC-Pva-103215	Pteropus vampyrus	79.59	3.00e-179	620.00
IUUC-Pte-104238	Pyrenophora teres	25.98	1.00e-05	44.70
IUUC-Rno-105968	Rattus norvegicus	79.74	1.00e-179	622.00
IUUC-Sha-107595	Sarcophilus harrisii	69.25	2.00e-141	495.00
IUUC-Sja-107950	Schizosaccharomyces japonicus	18.64	4.00e-05	42.70
IUUC-Ssl-108527	Sclerotinia sclerotiorum	24.49	7.00e-06	46.20
IUUC-Smo-109552	Selaginella moellendorffii	17.80	2.00e-03	38.90
IUUC-Sly-110873	Solanum lycopersicum	24.84	1.00e-05	45.80
IUUC-Stu-112586	Solanum tuberosum	21.78	5.00e-04	40.00
IUUC-Sar-113076	Sorex araneus	87.04	4.00e-129	454.00
IUUC-Sre-115143	Sporisorium reilianum	23.46	1.70e-01	31.60
IUUC-Ssc-115755	Sus scrofa	70.43	4.00e-146	510.00
IUUC-Tgu-117326	Taeniopygia guttata	79.74	1.00e-173	602.00
IUUC-Tru-117858	Takifugu rubripes	87.86	0.00e+00	670.00
IUUC-Tsy-119296	Tarsius syrichta	73.90	6.00e-160	556.00
IUUC-Tni-119822	Tetraodon nigroviridis	69.21	3.00e-148	518.00
IUUC-Tca-120935	Theobroma cacao	23.08	7.00e-07	50.10
IUUC-Tbe-127366	Tupaia belangeri	68.98	7.00e-139	486.00
IUUC-Ttr-128484	Tursiops truncatus	77.84	1.00e-152	533.00
IUUC-Vpa-130304	Vicugna pacos	94.33	1.00e-144	505.00
IUUC-Vvi-131560	Vitis vinifera	25.00	4.00e-05	44.30
IUUC-Xtr-132062	Xenopus tropicalis	71.51	1.00e-148	519.00
IUUC-Xma-134288	Xiphophorus maculatus	69.79	2.00e-150	525.00
IUUC-Yli-134374	Yarrowia lipolytica	20.47	5.00e-04	39.70
IUUC-Zma-135310	Zea mays	22.33	5.00e-03	36.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence