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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Mmu-064036
Ensembl Protein ID ENSMUSP00000143289.1
UniProt Accession A0A0G2JFS7; A0A0G2JFS7_MOUSE
Genbank Protein ID ENSMUSP00000143289
Protein Name LIM domain-binding protein 2
Genbank Nucleotide ID AC102487
Gene Name Ldb2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000039706.11 ENSMUST00000199534.4 ENSMUSP00000142442.1
ENSMUSG00000039706.11 ENSMUST00000070748.9 ENSMUSP00000067737.5
ENSMUSG00000039706.11 ENSMUST00000199256.4 ENSMUSP00000143775.1
ENSMUSG00000039706.11 ENSMUST00000199261.1 ENSMUSP00000143289.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
AREsitemiRTarBasemicroRNATRANSFAC
RepTarRAID2
Protein-protein Interaction
HINT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/U-box 61.45 4.00e-125 444.00 IUUC-Dme-031667
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Mus musculus
Protein Sequence
(Fasta)
MSSTPHDPFY SSPFGPFYRR HTPYMVQPEY RIYEMNKRLQ SRTEDSDNLW WDAFATEFFE 60
DDATLTLSFC LEDGPKRYTI GRTLIPRYFS TVFEGGVTDL YYILKHSKES YHNSSITVDC 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Mmu-064036|E3,U-box|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TAGAGGGCTC CCACAGCACT TCCCAGCCAG TGTGCTCAGC CTGCCTGCCT GCCTGCCTCT 60
GTGTGTGTCT GTGTGTGTGT GAGCGTGTGT GCGTGCGTCT ACTTTGTACT GTGAAGAACA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Mmu-064036|E3,U-box|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR030174--LDB2
IPR029005--LIM-bd/SEUSS
Gene Ontology

GO:0031252--C:cell leading edge
GO:0005634--C:nucleus
GO:0005667--C:transcription factor complex
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0010669--P:epithelial structure maintenance
GO:0001942--P:hair follicle development
GO:0044089--P:positive regulation of cellular component biogenesis
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0043549--P:regulation of kinase activity
GO:0035019--P:somatic stem cell population maintenance
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000177 Aegilops tauschii 23.18 5.00e-03 37.00
IUUC-Aml-002031 Ailuropoda melanoleuca 76.54 8.00e-152 530.00
IUUC-Atr-003083 Amborella trichopoda 21.39 3.00e-04 41.20
IUUC-Apl-004210 Anas platyrhynchos 80.42 3.00e-119 421.00
IUUC-Aca-005241 Anolis carolinensis 77.37 2.00e-153 535.00
IUUC-Aly-006204 Arabidopsis lyrata 25.00 1.00e-06 49.30
IUUC-Ath-007339 Arabidopsis thaliana 25.00 9.00e-07 49.30
IUUC-Ame-010910 Astyanax mexicanus 74.79 1.00e-147 515.00
IUUC-Bgr-012180 Blumeria graminis 21.30 1.00e-06 48.50
IUUC-Bta-012596 Bos taurus 96.50 0.00e+00 674.00
IUUC-Bci-013927 Botrytis cinerea 28.57 2.00e-08 54.70
IUUC-Bol-015721 Brassica oleracea 24.55 4.00e-07 50.40
IUUC-Bra-017183 Brassica rapa 25.00 4.00e-07 50.40
IUUC-Cel-018189 Caenorhabditis elegans 33.77 6.00e-29 122.00
IUUC-Cja-019586 Callithrix jacchus 96.78 0.00e+00 682.00
IUUC-Cfa-021188 Canis familiaris 76.54 1.00e-151 529.00
IUUC-Cpo-022350 Cavia porcellus 76.54 3.00e-150 524.00
IUUC-Csa-023816 Chlorocebus sabaeus 76.82 4.00e-152 531.00
IUUC-Cho-024958 Choloepus hoffmanni 81.07 2.00e-94 338.00
IUUC-Cin-025721 Ciona intestinalis 53.75 1.00e-93 336.00
IUUC-Csv-026065 Ciona savignyi 54.83 4.00e-97 348.00
IUUC-Dre-027356 Danio rerio 82.99 0.00e+00 633.00
IUUC-Dno-029918 Dasypus novemcinctus 77.20 6.00e-149 520.00
IUUC-Dor-030634 Dipodomys ordii 76.54 8.00e-152 529.00
IUUC-Dse-031245 Dothistroma septosporum 25.00 6.00e-04 39.70
IUUC-Dme-031667 Drosophila melanogaster 63.64 3.00e-125 442.00
IUUC-Ete-032246 Echinops telfairi 95.17 0.00e+00 659.00
IUUC-Eca-034015 Equus caballus 97.32 0.00e+00 688.00
IUUC-Eeu-034902 Erinaceus europaeus 76.54 8.00e-152 529.00
IUUC-Fca-035903 Felis catus 76.11 2.00e-150 525.00
IUUC-Fal-037407 Ficedula albicollis 96.23 0.00e+00 665.00
IUUC-Gmo-039466 Gadus morhua 74.86 3.00e-156 544.00
IUUC-Ggr-040030 Gaeumannomyces graminis 23.39 4.00e-05 43.50
IUUC-Gga-040214 Gallus gallus 77.81 5.00e-155 540.00
IUUC-Gac-042214 Gasterosteus aculeatus 73.26 5.00e-157 547.00
IUUC-Gma-042794 Glycine max 24.34 2.00e-08 55.10
IUUC-Ggo-044988 Gorilla gorilla 96.78 0.00e+00 687.00
IUUC-Hsa-046092 Homo sapiens 97.57 0.00e+00 690.00
IUUC-Itr-047934 Ictidomys tridecemlineatus 76.54 1.00e-151 529.00
IUUC-Lch-049895 Latimeria chalumnae 85.94 3.00e-105 374.00
IUUC-Lpe-050806 Leersia perrieri 25.69 7.00e-05 42.70
IUUC-Loc-052845 Lepisosteus oculatus 73.11 2.00e-154 538.00
IUUC-Lma-053090 Leptosphaeria maculans 25.20 4.00e-06 47.00
IUUC-Laf-054538 Loxodonta africana 75.61 3.00e-154 538.00
IUUC-Mcc-055116 Macaca mulatta 97.29 1.00e-153 535.00
IUUC-Meu-056777 Macropus eugenii 70.59 9.00e-136 476.00
IUUC-Mpo-057376 Magnaporthe poae 24.28 2.00e-05 44.70
IUUC-Mtr-058142 Medicago truncatula 25.38 5.00e-08 53.50
IUUC-Mga-059716 Meleagris gallopavo 95.15 0.00e+00 660.00
IUUC-Mmr-060649 Microcebus murinus 96.51 0.00e+00 686.00
IUUC-Mdo-062535 Monodelphis domestica 95.98 0.00e+00 667.00
IUUC-Mac-065338 Musa acuminata 25.14 7.00e-06 46.60
IUUC-Mpu-065719 Mustela putorius furo 76.54 1.00e-151 529.00
IUUC-Mlu-067219 Myotis lucifugus 75.56 7.00e-149 520.00
IUUC-Ncr-068691 Neurospora crassa 20.69 5.00e-04 40.00
IUUC-Nle-068983 Nomascus leucogenys 96.90 0.00e+00 647.00
IUUC-Opr-070467 Ochotona princeps 76.54 8.00e-152 529.00
IUUC-Ont-071566 Oreochromis niloticus 74.79 5.00e-158 550.00
IUUC-Oan-073368 Ornithorhynchus anatinus 76.47 1.00e-151 528.00
IUUC-Ocu-074854 Oryctolagus cuniculus 96.93 0.00e+00 656.00
IUUC-Ola-086364 Oryzias latipes 75.35 3.00e-157 548.00
IUUC-Oga-088235 Otolemur garnettii 95.71 0.00e+00 674.00
IUUC-Oar-089547 Ovis aries 76.54 6.00e-152 530.00
IUUC-Ptr-091423 Pan troglodytes 96.78 0.00e+00 682.00
IUUC-Pan-092378 Papio anubis 76.82 3.00e-152 531.00
IUUC-Psi-093638 Pelodiscus sinensis 95.17 0.00e+00 656.00
IUUC-Pma-094384 Petromyzon marinus 65.91 1.00e-55 209.00
IUUC-Pno-095027 Phaeosphaeria nodorum 22.18 7.00e-07 49.30
IUUC-Pfo-096031 Poecilia formosa 73.88 6.00e-159 553.00
IUUC-Pab-097886 Pongo abelii 96.90 0.00e+00 647.00
IUUC-Pop-099430 Populus trichocarpa 25.82 2.00e-06 48.50
IUUC-Pca-101138 Procavia capensis 76.54 8.00e-152 529.00
IUUC-Ppe-101293 Prunus persica 24.77 2.00e-07 51.20
IUUC-Pva-103215 Pteropus vampyrus 97.05 0.00e+00 690.00
IUUC-Pte-104238 Pyrenophora teres 29.49 1.00e-05 44.70
IUUC-Rno-105968 Rattus norvegicus 99.19 0.00e+00 697.00
IUUC-Sha-107595 Sarcophilus harrisii 75.63 7.00e-149 520.00
IUUC-Sja-107950 Schizosaccharomyces japonicus 16.97 4.00e-05 42.40
IUUC-Ssl-108527 Sclerotinia sclerotiorum 24.68 4.00e-06 46.60
IUUC-Smo-109552 Selaginella moellendorffii 19.70 4.00e-06 47.00
IUUC-Sly-110873 Solanum lycopersicum 26.09 5.00e-07 50.40
IUUC-Stu-112586 Solanum tuberosum 21.49 1.00e-05 45.10
IUUC-Sar-113076 Sorex araneus 91.94 2.00e-136 478.00
IUUC-Sre-115143 Sporisorium reilianum 25.00 1.30e-01 32.00
IUUC-Ssc-115755 Sus scrofa 76.97 2.00e-153 535.00
IUUC-Tgu-117326 Taeniopygia guttata 95.96 0.00e+00 663.00
IUUC-Tru-117858 Takifugu rubripes 80.97 0.00e+00 639.00
IUUC-Tsy-119296 Tarsius syrichta 89.54 5.00e-177 613.00
IUUC-Tni-119822 Tetraodon nigroviridis 74.79 7.00e-157 546.00
IUUC-Tca-120935 Theobroma cacao 25.38 5.00e-08 53.50
IUUC-Tbe-127366 Tupaia belangeri 75.70 2.00e-146 512.00
IUUC-Ttr-128484 Tursiops truncatus 86.60 2.00e-170 591.00
IUUC-Vpa-130304 Vicugna pacos 97.63 7.00e-155 539.00
IUUC-Vvi-131560 Vitis vinifera 24.62 9.00e-06 46.20
IUUC-Xtr-132062 Xenopus tropicalis 77.81 3.00e-155 541.00
IUUC-Xma-134288 Xiphophorus maculatus 75.07 1.00e-158 552.00
IUUC-Yli-134374 Yarrowia lipolytica 20.47 2.00e-03 37.70
IUUC-Zma-135310 Zea mays 23.56 8.00e-04 39.30
Created Date 25-Jun-2017

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