iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000023453.6	ENSRNOT00000089338.1	ENSRNOP00000070500.1
ENSRNOG00000023453.6	ENSRNOT00000057084.4	ENSRNOP00000053914.4
ENSRNOG00000023453.6	ENSRNOT00000023418.7	ENSRNOP00000023418.7
ENSRNOG00000023453.6	ENSRNOT00000088807.1	ENSRNOP00000070760.1
ENSRNOG00000023453.6	ENSRNOT00000088188.1	ENSRNOP00000070662.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-06	29.1	563	596

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sdtllvsGsdDgtikvW 28
           gH d vtcla        +++++sGs+D t+ +W
   Q: 563  GHWDVVTCLARsesyigGNCYILSGSRDATLLLW 596
           688999**976677796449************** PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

LAGPVSLSTP AQLVAPSVVV KGTLSVTSSE LYFEVDEEDP NFKKIDPKIL AYTEGLHGKW 60
LFTEIRSIFS RRYLLQNTAL EIFMANRVAV MFNFPDSATV KKVVNYLPRV GVGTSFGLPQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTGCCCTGG ATCTCCGCCG CCACCTCCGT CTCGCTGCGC CCCGGCGGGG GTGAGGACGA 60
GGCCGGAGTC TCTGGGTGAG GAGGAACTTT GTACGTCAGT GGTCGCGGGG GGCCCCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR000409--BEACH_dom
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH

Pfam

PF02138--Beach
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000339	Aegilops tauschii	39.84	8.00e-146	511.00
IUUC-Atr-002998	Amborella trichopoda	38.70	1.00e-140	496.00
IUUC-Apl-003632	Anas platyrhynchos	81.96	0.00e+00	835.00
IUUC-Aca-005124	Anolis carolinensis	89.75	0.00e+00	1528.00
IUUC-Aly-005407	Arabidopsis lyrata	39.11	1.00e-143	504.00
IUUC-Ath-007674	Arabidopsis thaliana	38.84	6.00e-142	499.00
IUUC-Ame-011487	Astyanax mexicanus	68.97	3.00e-170	591.00
IUUC-Bta-012509	Bos taurus	95.32	0.00e+00	1607.00
IUUC-Bdi-015051	Brachypodium distachyon	38.90	2.00e-144	507.00
IUUC-Bol-015261	Brassica oleracea	38.84	3.00e-137	484.00
IUUC-Bra-016877	Brassica rapa	38.71	2.00e-136	481.00
IUUC-Cja-018744	Callithrix jacchus	95.59	0.00e+00	1498.00
IUUC-Cfa-020786	Canis familiaris	95.82	0.00e+00	1620.00
IUUC-Cpo-021636	Cavia porcellus	95.70	0.00e+00	1605.00
IUUC-Ete-032481	Echinops telfairi	89.97	0.00e+00	1293.00
IUUC-Eca-033893	Equus caballus	96.08	0.00e+00	1620.00
IUUC-Fca-035726	Felis catus	95.55	0.00e+00	997.00
IUUC-Fal-036871	Ficedula albicollis	90.58	0.00e+00	1539.00
IUUC-Gga-041206	Gallus gallus	89.14	0.00e+00	1529.00
IUUC-Gma-042772	Glycine max	39.76	2.00e-146	514.00
IUUC-Hsa-045763	Homo sapiens	69.08	0.00e+00	737.00
IUUC-Hvu-047134	Hordeum vulgare	39.43	5.00e-147	515.00
IUUC-Itr-048852	Ictidomys tridecemlineatus	97.34	0.00e+00	1634.00
IUUC-Lch-050027	Latimeria chalumnae	84.75	0.00e+00	1347.00
IUUC-Lpe-050958	Leersia perrieri	39.70	2.00e-143	504.00
IUUC-Loc-052771	Lepisosteus oculatus	85.70	0.00e+00	1472.00
IUUC-Laf-053724	Loxodonta africana	95.57	0.00e+00	1612.00
IUUC-Mcc-055200	Macaca mulatta	95.32	0.00e+00	1501.00
IUUC-Mtr-058372	Medicago truncatula	38.50	5.00e-139	490.00
IUUC-Mga-059851	Meleagris gallopavo	89.32	0.00e+00	1514.00
IUUC-Mmr-061112	Microcebus murinus	96.33	0.00e+00	1625.00
IUUC-Mdo-062727	Monodelphis domestica	93.54	0.00e+00	1593.00
IUUC-Mmu-064194	Mus musculus	98.79	0.00e+00	1541.00
IUUC-Mac-064991	Musa acuminata	37.23	7.00e-146	513.00
IUUC-Mpu-066074	Mustela putorius furo	95.82	0.00e+00	1613.00
IUUC-Mlu-067308	Myotis lucifugus	93.65	0.00e+00	1580.00
IUUC-Oan-073413	Ornithorhynchus anatinus	92.65	0.00e+00	1463.00
IUUC-Ocu-074483	Oryctolagus cuniculus	92.07	0.00e+00	1571.00
IUUC-Oba-075426	Oryza barthii	40.76	2.00e-143	505.00
IUUC-Obr-076907	Oryza brachyantha	40.25	5.00e-143	503.00
IUUC-Ogl-077620	Oryza glaberrima	38.63	4.00e-138	485.00
IUUC-Ogu-078751	Oryza glumaepatula	41.03	2.00e-145	510.00
IUUC-Oin-079673	Oryza indica	38.63	1.00e-137	486.00
IUUC-Olo-080417	Oryza longistaminata	38.63	1.00e-137	485.00
IUUC-Ome-081931	Oryza meridionalis	40.76	3.00e-143	504.00
IUUC-Oni-082349	Oryza nivara	40.76	7.00e-144	506.00
IUUC-Oru-085197	Oryza rufipogon	40.62	2.00e-143	505.00
IUUC-Ola-087242	Oryzias latipes	82.46	0.00e+00	1407.00
IUUC-Olu-087890	Ostreococcus lucimarinus	35.05	2.00e-120	426.00
IUUC-Oga-088409	Otolemur garnettii	96.08	0.00e+00	1615.00
IUUC-Oar-089217	Ovis aries	95.19	0.00e+00	1609.00
IUUC-Pop-099604	Populus trichocarpa	38.12	7.00e-141	496.00
IUUC-Pca-100240	Procavia capensis	87.72	0.00e+00	1465.00
IUUC-Ppe-101836	Prunus persica	37.28	7.00e-143	503.00
IUUC-Sha-107387	Sarcophilus harrisii	93.92	0.00e+00	1592.00
IUUC-Smo-109504	Selaginella moellendorffii	38.99	3.00e-138	486.00
IUUC-Sit-110075	Setaria italica	39.43	1.00e-141	499.00
IUUC-Sly-111033	Solanum lycopersicum	38.62	2.00e-142	501.00
IUUC-Tgu-117304	Taeniopygia guttata	90.72	0.00e+00	1542.00
IUUC-Tru-118226	Takifugu rubripes	72.44	0.00e+00	1163.00
IUUC-Tni-120595	Tetraodon nigroviridis	64.75	0.00e+00	990.00
IUUC-Tca-121572	Theobroma cacao	39.06	1.00e-145	512.00
IUUC-Tae-123372	Triticum aestivum	39.69	1.00e-126	447.00
IUUC-Tur-126212	Triticum urartu	39.43	3.00e-142	501.00
IUUC-Ttr-128452	Tursiops truncatus	95.81	0.00e+00	1610.00
IUUC-Vvi-130860	Vitis vinifera	40.08	1.00e-143	506.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence