iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114144

Ensembl Protein ID

Sb10g001730.1

UniProt Accession

C5Z379; C5Z379_SORBI

Genbank Protein ID

EER87760.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G017900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g001730	Sb10g001730.1	Sb10g001730.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-06	29.5	237	269

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           +vt+l+f  +   l+++G+  g+i ++Dlr   
   Q: 237  EVTSLQFdeDQgYLMAVGTSTGKISIYDLRMSS 269
           69*****9633466899***********98665 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAASHSHGAG TLKSTAINGV KLYSLTGSRY VAPWVVAKKK RALRKDKEYQ RRLDLIHDLR 60
FETATTKIKL TPDDQYVIAS GIYPPQVKVY ELKELSMKFE RHLISEIVTF QILGDDYSKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTGCGCGCG CAACCAGCGC CTGGACAGCC GCCGACTCCG ACCCCCTCCA AATTCCTTAA 60
ACCCTAGCAG CAGCAGCAGC TCCCACTGCC ACCGCTACGG CGCCGTCGAC GACGAGGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012580--NUC153
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF08159--NUC153

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0009561--P:megagametogenesis

KEGG

sbi:SORBI_10g001730

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002265	Ailuropoda melanoleuca	42.45	3.00e-117	415.00
IUUC-Atr-002672	Amborella trichopoda	58.84	0.00e+00	794.00
IUUC-Apl-003542	Anas platyrhynchos	42.31	1.00e-119	422.00
IUUC-Aca-005271	Anolis carolinensis	43.54	4.00e-112	397.00
IUUC-Aly-005701	Arabidopsis lyrata	56.54	0.00e+00	716.00
IUUC-Acl-008049	Aspergillus clavatus	34.70	2.00e-82	299.00
IUUC-Afl-008525	Aspergillus flavus	33.39	4.00e-78	285.00
IUUC-Afu-008771	Aspergillus fumigatus	33.16	5.00e-78	285.00
IUUC-Ani-009182	Aspergillus nidulans	37.39	2.00e-76	279.00
IUUC-Ang-009747	Aspergillus niger	33.56	2.00e-82	299.00
IUUC-Aor-010115	Aspergillus oryzae	33.39	3.00e-78	285.00
IUUC-Ate-010433	Aspergillus terreus	34.02	2.00e-81	295.00
IUUC-Ame-011026	Astyanax mexicanus	42.29	2.00e-119	422.00
IUUC-Bgr-012140	Blumeria graminis	36.68	1.00e-83	303.00
IUUC-Bta-012677	Bos taurus	41.30	7.00e-113	400.00
IUUC-Bci-013962	Botrytis cinerea	36.04	9.00e-90	323.00
IUUC-Bdi-014976	Brachypodium distachyon	78.53	0.00e+00	1029.00
IUUC-Bol-016296	Brassica oleracea	56.97	0.00e+00	750.00
IUUC-Bra-017696	Brassica rapa	56.80	0.00e+00	746.00
IUUC-Cja-018936	Callithrix jacchus	41.60	5.00e-117	414.00
IUUC-Cfa-021047	Canis familiaris	42.26	8.00e-117	413.00
IUUC-Cpo-022493	Cavia porcellus	42.83	2.00e-117	416.00
IUUC-Cre-022717	Chlamydomonas reinhardtii	43.54	2.00e-104	372.00
IUUC-Csa-023564	Chlorocebus sabaeus	41.79	2.00e-117	415.00
IUUC-Cho-024796	Choloepus hoffmanni	39.61	3.00e-101	362.00
IUUC-Cin-025362	Ciona intestinalis	41.31	2.00e-115	409.00
IUUC-Csv-026200	Ciona savignyi	40.46	9.00e-114	403.00
IUUC-Cgl-026431	Colletotrichum gloeosporioides	35.05	5.00e-92	331.00
IUUC-Dre-028028	Danio rerio	42.05	9.00e-121	426.00
IUUC-Dno-029793	Dasypus novemcinctus	38.00	3.00e-95	342.00
IUUC-Dse-031377	Dothistroma septosporum	30.94	2.00e-77	282.00
IUUC-Eca-034250	Equus caballus	42.26	6.00e-117	414.00
IUUC-Eeu-034774	Erinaceus europaeus	37.83	7.00e-74	271.00
IUUC-Fca-035379	Felis catus	42.26	2.00e-116	412.00
IUUC-Fal-037057	Ficedula albicollis	43.74	1.00e-116	413.00
IUUC-Fox-037993	Fusarium oxysporum	35.85	4.00e-92	331.00
IUUC-Fso-038448	Fusarium solani	35.96	3.00e-87	315.00
IUUC-Gmo-039112	Gadus morhua	40.42	3.00e-105	375.00
IUUC-Ggr-039755	Gaeumannomyces graminis	37.06	3.00e-87	315.00
IUUC-Gga-040368	Gallus gallus	42.67	4.00e-122	431.00
IUUC-Gac-041616	Gasterosteus aculeatus	41.49	8.00e-107	380.00
IUUC-Gma-043486	Glycine max	57.48	0.00e+00	751.00
IUUC-Ggo-045196	Gorilla gorilla	44.04	1.00e-106	379.00
IUUC-Hsa-046721	Homo sapiens	41.79	4.00e-117	414.00
IUUC-Kpa-049162	Komagataella pastoris	36.87	2.00e-105	376.00
IUUC-Lch-049455	Latimeria chalumnae	42.51	4.00e-108	384.00
IUUC-Lpe-051607	Leersia perrieri	80.00	0.00e+00	964.00
IUUC-Loc-052092	Lepisosteus oculatus	41.52	2.00e-106	379.00
IUUC-Laf-053696	Loxodonta africana	42.45	1.00e-118	419.00
IUUC-Mcc-055084	Macaca mulatta	41.98	1.00e-117	416.00
IUUC-Mor-056951	Magnaporthe oryzae	37.24	3.00e-88	318.00
IUUC-Mpo-057507	Magnaporthe poae	37.06	2.00e-83	302.00
IUUC-Mtr-058796	Medicago truncatula	58.02	0.00e+00	761.00
IUUC-Mga-059835	Meleagris gallopavo	42.40	6.00e-117	414.00
IUUC-Mmr-060753	Microcebus murinus	41.79	2.00e-117	415.00
IUUC-Mdo-061953	Monodelphis domestica	41.71	8.00e-115	407.00
IUUC-Mmu-064156	Mus musculus	41.71	1.00e-114	406.00
IUUC-Mac-064715	Musa acuminata	64.99	0.00e+00	730.00
IUUC-Mpu-066316	Mustela putorius furo	40.76	8.00e-108	383.00
IUUC-Mlu-068042	Myotis lucifugus	42.45	5.00e-117	414.00
IUUC-Nfi-068287	Neosartorya fischeri	34.39	3.00e-83	301.00
IUUC-Nle-069499	Nomascus leucogenys	41.79	4.00e-117	414.00
IUUC-Ont-071296	Oreochromis niloticus	42.26	2.00e-109	389.00
IUUC-Oan-072981	Ornithorhynchus anatinus	41.24	6.00e-75	273.00
IUUC-Ocu-073747	Oryctolagus cuniculus	42.26	1.00e-116	412.00
IUUC-Oba-075212	Oryza barthii	74.20	0.00e+00	1010.00
IUUC-Obr-076689	Oryza brachyantha	79.35	0.00e+00	1014.00
IUUC-Ogl-077430	Oryza glaberrima	78.90	0.00e+00	1028.00
IUUC-Ogu-078810	Oryza glumaepatula	78.08	0.00e+00	964.00
IUUC-Oin-080198	Oryza indica	81.22	0.00e+00	897.00
IUUC-Olo-080954	Oryza longistaminata	74.67	0.00e+00	956.00
IUUC-Oni-082486	Oryza nivara	77.76	0.00e+00	961.00
IUUC-Opu-083430	Oryza punctata	75.19	0.00e+00	966.00
IUUC-Oru-084369	Oryza rufipogon	75.33	0.00e+00	961.00
IUUC-Osa-086017	Oryza sativa	84.43	0.00e+00	776.00
IUUC-Ola-086883	Oryzias latipes	42.23	3.00e-114	404.00
IUUC-Olu-087827	Ostreococcus lucimarinus	41.77	5.00e-126	444.00
IUUC-Oga-088491	Otolemur garnettii	42.07	6.00e-117	414.00
IUUC-Oar-089837	Ovis aries	41.87	5.00e-116	410.00
IUUC-Ptr-091505	Pan troglodytes	41.79	4.00e-117	414.00
IUUC-Pan-092216	Papio anubis	41.90	1.00e-115	409.00
IUUC-Psi-093189	Pelodiscus sinensis	43.76	1.00e-107	383.00
IUUC-Pma-094202	Petromyzon marinus	40.19	1.00e-115	409.00
IUUC-Ppa-095279	Physcomitrella patens	46.91	1.00e-162	566.00
IUUC-Pfo-096989	Poecilia formosa	41.83	4.00e-105	374.00
IUUC-Pab-097557	Pongo abelii	41.98	3.00e-117	415.00
IUUC-Pop-099045	Populus trichocarpa	59.25	0.00e+00	767.00
IUUC-Ppe-101353	Prunus persica	59.77	0.00e+00	775.00
IUUC-Pva-102467	Pteropus vampyrus	39.92	1.00e-112	399.00
IUUC-Rno-105733	Rattus norvegicus	41.71	6.00e-115	407.00
IUUC-Sha-107422	Sarcophilus harrisii	41.14	1.00e-71	262.00
IUUC-Ssl-108549	Sclerotinia sclerotiorum	35.04	1.00e-88	319.00
IUUC-Sit-109854	Setaria italica	86.26	0.00e+00	1141.00
IUUC-Sly-111732	Solanum lycopersicum	60.78	0.00e+00	765.00
IUUC-Sar-113281	Sorex araneus	41.56	1.00e-91	329.00
IUUC-Ssc-116083	Sus scrofa	42.26	7.00e-116	410.00
IUUC-Tru-117757	Takifugu rubripes	38.29	4.00e-104	371.00
IUUC-Tni-119895	Tetraodon nigroviridis	40.84	1.00e-102	366.00
IUUC-Tre-121876	Trichoderma reesei	36.83	3.00e-89	322.00
IUUC-Tvi-122641	Trichoderma virens	36.10	3.00e-88	318.00
IUUC-Vpa-130401	Vicugna pacos	38.38	5.00e-88	318.00
IUUC-Vvi-131160	Vitis vinifera	61.49	0.00e+00	807.00
IUUC-Xma-134256	Xiphophorus maculatus	42.02	8.00e-105	374.00
IUUC-Zma-135860	Zea mays	94.08	0.00e+00	1244.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence