iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	60.68	0.00e+00	1145.00	IUUC-Dre-027797
E3 activity/RING/RING	67.23	6.00e-164	576.00	IUUC-Hsa-046169
E3 activity/RING/PHD	67.23	6.00e-164	576.00	IUUC-Hsa-046169

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryzias latipes

Protein Sequence
(Fasta)

EAPTPDGEAS SSGEAAASTS GEANDGVGEI VSPTEPNGSN AEPAATESPA AAEASPPPAA 60
AAAASTPVPV PLNLLDTCAV CKESLQNRDC EPKLLPCLHS FCLKCIPQPD RQISVQVPGP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGCACCGA CACCCGACGG TGAAGCTAGC AGCAGCGGCG AGGCTGCCGC CTCTACTAGC 60
GGGGAAGCGA ACGATGGCGT CGGCGAGATC GTTAGCCCGA CCGAGCCCAA CGGCTCCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0103--Bromodomain
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003649--Bbox_C
IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS50119--ZF_BBOX
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00439--Bromodomain
PF00628--PHD
PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00502--BBC
SM00336--BBOX
SM00297--BROMO
SM00249--PHD
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002364	Ailuropoda melanoleuca	66.83	1.00e-157	550.00
IUUC-Apl-003894	Anas platyrhynchos	51.75	0.00e+00	871.00
IUUC-Aca-004658	Anolis carolinensis	67.05	2.00e-133	469.00
IUUC-Ame-011619	Astyanax mexicanus	54.36	6.00e-145	508.00
IUUC-Bta-013341	Bos taurus	67.16	1.00e-156	547.00
IUUC-Cel-018225	Caenorhabditis elegans	20.05	1.00e-16	82.00
IUUC-Cja-018733	Callithrix jacchus	67.56	3.00e-161	562.00
IUUC-Cfa-020725	Canis familiaris	67.34	1.00e-155	543.00
IUUC-Cpo-021833	Cavia porcellus	67.56	2.00e-161	563.00
IUUC-Csa-023040	Chlorocebus sabaeus	67.56	6.00e-161	561.00
IUUC-Cho-024934	Choloepus hoffmanni	66.48	7.00e-135	474.00
IUUC-Cin-025200	Ciona intestinalis	29.88	1.00e-39	159.00
IUUC-Csv-026278	Ciona savignyi	42.45	6.00e-16	77.40
IUUC-Dre-027797	Danio rerio	74.94	1.00e-180	627.00
IUUC-Dno-028955	Dasypus novemcinctus	67.56	2.00e-161	563.00
IUUC-Dor-030744	Dipodomys ordii	41.12	4.00e-72	266.00
IUUC-Dme-032143	Drosophila melanogaster	29.20	5.00e-41	163.00
IUUC-Ete-032728	Echinops telfairi	50.10	8.00e-123	434.00
IUUC-Eca-033573	Equus caballus	67.56	2.00e-161	562.00
IUUC-Eeu-035138	Erinaceus europaeus	56.69	1.00e-122	434.00
IUUC-Fca-035776	Felis catus	68.36	2.00e-140	493.00
IUUC-Fal-037583	Ficedula albicollis	52.17	0.00e+00	939.00
IUUC-Gmo-039353	Gadus morhua	80.05	0.00e+00	665.00
IUUC-Gga-040874	Gallus gallus	51.69	0.00e+00	954.00
IUUC-Gac-041689	Gasterosteus aculeatus	72.26	0.00e+00	1426.00
IUUC-Ggo-045151	Gorilla gorilla	47.69	2.00e-110	393.00
IUUC-Hsa-046169	Homo sapiens	67.56	7.00e-161	561.00
IUUC-Itr-048262	Ictidomys tridecemlineatus	52.36	2.00e-125	443.00
IUUC-Lch-050411	Latimeria chalumnae	65.84	1.00e-159	556.00
IUUC-Loc-051992	Lepisosteus oculatus	73.95	4.00e-174	605.00
IUUC-Laf-054552	Loxodonta africana	68.36	9.00e-141	494.00
IUUC-Mcc-055744	Macaca mulatta	67.56	7.00e-161	561.00
IUUC-Meu-056647	Macropus eugenii	69.17	5.00e-147	514.00
IUUC-Mga-059589	Meleagris gallopavo	55.61	1.00e-169	589.00
IUUC-Mmr-060727	Microcebus murinus	67.40	5.00e-160	558.00
IUUC-Mdo-063029	Monodelphis domestica	67.80	2.00e-161	563.00
IUUC-Mmu-064033	Mus musculus	67.56	3.00e-161	562.00
IUUC-Mpu-066679	Mustela putorius furo	67.56	3.00e-161	562.00
IUUC-Mlu-067286	Myotis lucifugus	68.08	6.00e-140	491.00
IUUC-Nle-069156	Nomascus leucogenys	67.31	2.00e-161	563.00
IUUC-Opr-070309	Ochotona princeps	54.26	1.00e-96	347.00
IUUC-Ont-071586	Oreochromis niloticus	89.11	0.00e+00	762.00
IUUC-Oan-073205	Ornithorhynchus anatinus	48.27	2.00e-117	416.00
IUUC-Ocu-074667	Oryctolagus cuniculus	68.08	4.00e-140	492.00
IUUC-Oga-089101	Otolemur garnettii	67.56	5.00e-161	561.00
IUUC-Oar-090167	Ovis aries	67.07	3.00e-160	559.00
IUUC-Ptr-090901	Pan troglodytes	67.56	6.00e-161	561.00
IUUC-Pan-092448	Papio anubis	67.56	8.00e-161	561.00
IUUC-Psi-093657	Pelodiscus sinensis	50.59	0.00e+00	771.00
IUUC-Pfo-097104	Poecilia formosa	87.84	0.00e+00	706.00
IUUC-Pab-097704	Pongo abelii	67.56	6.00e-161	561.00
IUUC-Pca-100540	Procavia capensis	49.86	4.00e-98	352.00
IUUC-Pva-102733	Pteropus vampyrus	67.69	6.00e-141	495.00
IUUC-Rno-105512	Rattus norvegicus	67.56	3.00e-161	562.00
IUUC-Sha-107423	Sarcophilus harrisii	68.64	1.00e-140	494.00
IUUC-Sar-113615	Sorex araneus	53.46	1.00e-78	287.00
IUUC-Ssc-115424	Sus scrofa	67.32	1.00e-160	559.00
IUUC-Tgu-117368	Taeniopygia guttata	53.32	9.00e-126	444.00
IUUC-Tru-118728	Takifugu rubripes	76.59	0.00e+00	700.00
IUUC-Tsy-119053	Tarsius syrichta	67.90	2.00e-139	489.00
IUUC-Tni-120279	Tetraodon nigroviridis	63.24	0.00e+00	732.00
IUUC-Tbe-127573	Tupaia belangeri	60.06	2.00e-120	427.00
IUUC-Ttr-128594	Tursiops truncatus	67.32	6.00e-161	561.00
IUUC-Vpa-130619	Vicugna pacos	44.15	5.00e-95	342.00
IUUC-Xtr-132837	Xenopus tropicalis	66.75	2.00e-152	533.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence