iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s09300	POPTR_0005s09300.2	POPTR_0005s09300.2
POPTR_0005s09300	POPTR_0005s09300.1	POPTR_0005s09300.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-08	35.4	266	307

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+ d++dg  + +l+C+H +h +C+++w       + +  CP+C+
   Q: 266  CVICRLDYEDGetLTLLSCKHSYHSECINNW------LKINKACPVCN 307
           ****999977666778***************......**********7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDDDDNNNNS SNTKLGSGES KNNNSEQQEE NPNLSSNGEQ QEGDGEREGG GGGPQRQTSR 60
RTPFTNLSQV DADLALARTL QEQERAYMML RMNNDGSDYG SWEAGSYLRD DEDDFGDPDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTTTTCAA TTAGCCGTTT TAATTTTGTA TATTTCAGGT TGCCATGAAC GAATCCCACA 60
TCAAAAAGCA TCTCAAATTT CCTCTATCTC TCTCTAACAA CAACAAAATT TGAGAGATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000406	Aegilops tauschii	60.27	2.00e-43	168.00
IUUC-Apl-003246	Anas platyrhynchos	37.78	3.00e-16	79.30
IUUC-Bta-012954	Bos taurus	38.89	2.00e-16	79.30
IUUC-Bdi-014786	Brachypodium distachyon	68.87	5.00e-44	171.00
IUUC-Cja-019606	Callithrix jacchus	40.00	6.00e-15	74.30
IUUC-Cfa-020959	Canis familiaris	38.89	4.00e-16	79.00
IUUC-Cpo-021722	Cavia porcellus	37.78	4.00e-16	79.00
IUUC-Cre-022675	Chlamydomonas reinhardtii	44.09	6.00e-20	89.70
IUUC-Csa-024265	Chlorocebus sabaeus	38.89	4.00e-16	79.00
IUUC-Cin-025552	Ciona intestinalis	38.30	5.00e-16	76.60
IUUC-Dno-030071	Dasypus novemcinctus	40.00	2.00e-16	79.70
IUUC-Dor-030199	Dipodomys ordii	39.39	3.00e-16	79.00
IUUC-Dme-032187	Drosophila melanogaster	38.89	2.00e-16	81.30
IUUC-Eca-034105	Equus caballus	38.89	4.00e-16	78.60
IUUC-Fca-036360	Felis catus	38.89	3.00e-16	79.30
IUUC-Fal-037494	Ficedula albicollis	38.89	3.00e-16	79.30
IUUC-Gmo-038591	Gadus morhua	37.78	4.00e-16	78.20
IUUC-Gga-040521	Gallus gallus	38.89	3.00e-16	79.00
IUUC-Hvu-047198	Hordeum vulgare	63.29	3.00e-48	184.00
IUUC-Lch-050227	Latimeria chalumnae	38.89	2.00e-16	79.30
IUUC-Lpe-051234	Leersia perrieri	58.60	2.00e-45	175.00
IUUC-Laf-053419	Loxodonta africana	38.89	3.00e-16	79.00
IUUC-Meu-056404	Macropus eugenii	38.89	4.00e-16	78.60
IUUC-Mmr-061622	Microcebus murinus	40.00	7.00e-17	78.60
IUUC-Mdo-061822	Monodelphis domestica	37.78	4.00e-16	78.60
IUUC-Mmu-063712	Mus musculus	38.89	4.00e-16	78.60
IUUC-Mpu-066508	Mustela putorius furo	38.89	4.00e-16	79.00
IUUC-Mlu-068210	Myotis lucifugus	37.78	3.00e-16	79.00
IUUC-Nle-069124	Nomascus leucogenys	40.00	5.00e-17	81.60
IUUC-Opr-071167	Ochotona princeps	38.89	8.00e-16	77.40
IUUC-Ont-072424	Oreochromis niloticus	37.78	3.00e-16	79.30
IUUC-Ocu-074801	Oryctolagus cuniculus	38.89	2.00e-16	79.30
IUUC-Oba-075053	Oryza barthii	59.64	8.00e-43	166.00
IUUC-Obr-076920	Oryza brachyantha	50.75	1.00e-55	209.00
IUUC-Ogl-077780	Oryza glaberrima	59.64	8.00e-43	166.00
IUUC-Ogu-078317	Oryza glumaepatula	56.98	4.00e-42	164.00
IUUC-Oin-079849	Oryza indica	61.35	3.00e-43	167.00
IUUC-Olo-080905	Oryza longistaminata	52.99	3.00e-29	123.00
IUUC-Ome-081728	Oryza meridionalis	61.49	3.00e-43	168.00
IUUC-Oni-082915	Oryza nivara	69.23	4.00e-43	166.00
IUUC-Opu-083391	Oryza punctata	50.00	9.00e-57	213.00
IUUC-Oru-085011	Oryza rufipogon	58.93	1.00e-42	166.00
IUUC-Osa-086147	Oryza sativa	58.93	1.00e-42	166.00
IUUC-Ola-086904	Oryzias latipes	37.78	3.00e-16	79.00
IUUC-Oga-087997	Otolemur garnettii	37.78	4.00e-16	79.00
IUUC-Psi-093539	Pelodiscus sinensis	37.78	4.00e-16	78.60
IUUC-Pab-098694	Pongo abelii	37.78	5.00e-16	78.60
IUUC-Pca-100961	Procavia capensis	38.89	4.00e-16	78.60
IUUC-Pva-102987	Pteropus vampyrus	37.78	3.00e-16	79.30
IUUC-Rno-105434	Rattus norvegicus	38.89	5.00e-16	78.20
IUUC-Sha-107023	Sarcophilus harrisii	38.89	4.00e-16	79.00
IUUC-Smo-108692	Selaginella moellendorffii	60.87	4.00e-30	121.00
IUUC-Sar-112966	Sorex araneus	37.78	5.00e-16	78.60
IUUC-Ssc-115578	Sus scrofa	38.89	2.00e-16	79.70
IUUC-Tgu-117430	Taeniopygia guttata	38.89	3.00e-16	79.00
IUUC-Tru-118715	Takifugu rubripes	40.23	2.00e-15	77.00
IUUC-Tni-120282	Tetraodon nigroviridis	41.11	1.00e-16	80.90
IUUC-Tae-123101	Triticum aestivum	63.45	2.00e-46	178.00
IUUC-Tur-126249	Triticum urartu	59.75	1.00e-46	179.00
IUUC-Tbe-127519	Tupaia belangeri	38.89	1.00e-16	79.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence