iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pab-097953

Ensembl Protein ID

ENSPPYP00000010433.1

UniProt Accession

H2NWR8; H2NWR8_PONAB

Genbank Protein ID

ENSPPYP00000010433

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01010251

Gene Name

MED16

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000009296.1	ENSPPYT00000010846.1	ENSPPYP00000010433.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-06	27.6	80	112

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           H + +tcl++  s+ +l+s+  Dg+ik+W++ +
   Q: 80   HREAITCLEWdqSGSRLLSADADGQIKCWSMAD 112
           9999******965599*************9765 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MCDLRRPAAG GMMDLAYVCE WEKWSKSTHC PSVPLACAWS CRNLIAFTMD LRSDDQDLTR 60
RIHILDTEHP WDLHSIPSEH REAITCLEWD QSGSRLLSAD ADGQIKCWSM ADHLANSWES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGTGACT CATAGACATC CCACCACACC TCCGTCCCGC AGGAGCTGGC GACTGCCCTC 60
ATGTGTGACT TGCGGCGGCC AGCGGCAGGT GGGATGATGG ACTTGGCCTA CGTCTGTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR021665--Mediator_Med16
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11635--Med16

SMART

SM00320--WD40

Gene Ontology

GO:0016592--C:mediator complex
GO:0016020--C:membrane
GO:0004872--F:receptor activity
GO:0030375--F:thyroid hormone receptor coactivator activity
GO:0030521--P:androgen receptor signaling pathway
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0006367--P:transcription initiation from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011407	Astyanax mexicanus	71.99	0.00e+00	833.00
IUUC-Bta-012729	Bos taurus	89.64	0.00e+00	1071.00
IUUC-Cja-019000	Callithrix jacchus	97.96	9.00e-103	365.00
IUUC-Cfa-020876	Canis familiaris	92.44	0.00e+00	1110.00
IUUC-Cpo-021655	Cavia porcellus	91.34	0.00e+00	1085.00
IUUC-Dre-027473	Danio rerio	75.58	0.00e+00	920.00
IUUC-Dno-029564	Dasypus novemcinctus	90.52	0.00e+00	1010.00
IUUC-Eca-033914	Equus caballus	92.15	0.00e+00	874.00
IUUC-Fca-036338	Felis catus	95.38	0.00e+00	806.00
IUUC-Fal-037249	Ficedula albicollis	84.59	0.00e+00	1056.00
IUUC-Gmo-039447	Gadus morhua	61.34	1.00e-162	566.00
IUUC-Gga-041100	Gallus gallus	84.94	0.00e+00	977.00
IUUC-Gac-042603	Gasterosteus aculeatus	72.03	5.00e-153	534.00
IUUC-Ggo-044794	Gorilla gorilla	97.17	0.00e+00	1180.00
IUUC-Hsa-045722	Homo sapiens	98.20	0.00e+00	858.00
IUUC-Itr-048948	Ictidomys tridecemlineatus	92.62	0.00e+00	1111.00
IUUC-Loc-052871	Lepisosteus oculatus	78.54	0.00e+00	947.00
IUUC-Mcc-055201	Macaca mulatta	97.48	0.00e+00	1179.00
IUUC-Mga-059807	Meleagris gallopavo	81.15	0.00e+00	994.00
IUUC-Mmr-060781	Microcebus murinus	94.18	0.00e+00	1125.00
IUUC-Mpu-066388	Mustela putorius furo	91.97	0.00e+00	1103.00
IUUC-Ont-072316	Oreochromis niloticus	78.79	0.00e+00	924.00
IUUC-Ola-086721	Oryzias latipes	76.11	0.00e+00	881.00
IUUC-Oga-088875	Otolemur garnettii	93.35	0.00e+00	1139.00
IUUC-Oar-090444	Ovis aries	91.68	0.00e+00	1103.00
IUUC-Ptr-091117	Pan troglodytes	98.42	0.00e+00	856.00
IUUC-Pan-091807	Papio anubis	97.48	0.00e+00	1180.00
IUUC-Pfo-097356	Poecilia formosa	76.65	0.00e+00	895.00
IUUC-Pca-100896	Procavia capensis	91.09	0.00e+00	1097.00
IUUC-Rno-105038	Rattus norvegicus	90.94	0.00e+00	1083.00
IUUC-Tgu-116750	Taeniopygia guttata	83.54	0.00e+00	1045.00
IUUC-Tru-118405	Takifugu rubripes	76.55	0.00e+00	917.00
IUUC-Tni-120217	Tetraodon nigroviridis	76.95	0.00e+00	923.00
IUUC-Ttr-129222	Tursiops truncatus	91.55	0.00e+00	1100.00
IUUC-Xtr-132084	Xenopus tropicalis	81.36	0.00e+00	947.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence