iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014725

Ensembl Protein ID

BRADI1G30580.1

UniProt Accession

I1GVG5; I1GVG5_BRADI

Genbank Protein ID

KQK16785.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100833468; BRADI_1g30580

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G30580	BRADI1G30580.1	BRADI1G30580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-30	104.3	556	587
UBD/Beta-Prp	3.70e-57	194.3	89	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHtd++t+l+f  d + l+s+s Dgt+++WD+
   Q: 556  GHTDRITDLCFsEDgKWLISSSMDGTLRIWDI 587
           8**********955699**************5 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl....lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkg 92
           t + h+++v t   f   +++++++   g + +w ++        +  +s  ++++ ++ ++pd+     + gse + +++w++st k ++ +kg
   Q: 89   TWSRHEEKVNTLYLF---GEYILSADIKGDVFIWAFRGAEPssepVGNISLGDKFTPTCIMHPDTYlnKVIIGSEEGPLQLWNISTKKKLYDFKG 180
           567788888887888...******************997779999999*999999*9999***9866789************************* PP
   S: 93   hedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysl 186
            ++sv+++ +sp  d +++G +  ti+v +++ +++l +++ + +g+v+ +++  dg  ll+sG+  +++ +W+l+  +l    +++h++s+ sl
   Q: 181  WDSSVRCCVSSPALDIVAVGCSNGTIHVHNIRYDEELMSFNHQIRGAVTALSFRTDGqPLLASGGSSGVISIWNLEKRRLHSVIREAHDGSIVSL 275
           *********************************************************************************************** PP
   S: 187  sfdsngkelvsgsldgtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
            f  n + l+s + d+++k+w +       + +r   gh+++++++rf  n+++++s+++D+  r++ + + +  + l++++
   Q: 276  HFLANEPILMSSAADNSIKMWIFDsndgDARLLRFRSGHSAPPRCIRFYGNGKYILSAGQDRAFRLFSVVQEQQSRELSQRH 357
           *********************9996666566699999*****************************9888888777777766 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGIFEPFRAI GYITTGGVPF SLQRLGTETF VTVSVGKAFQ VYNCAKLNLV LAGPQLPKKI 60
RALASFKDYT FAAYGSDIAV FKRTDLVVTW SRHEEKVNTL YLFGEYILSA DIKGDVFIWA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCCCAGCCT CTCCTCTCTC ACCCTTTCTT CCTTCCTTCT CGCGCCGCCG CTCCAACCCC 60
AAACCCCCTC TAAAACCCTC GCCGCCGTCG CGCGCGCTCT CCCTTCGAAA GCACCCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

bdi:100833468

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	91.86	0.00e+00	1639.00
IUUC-Aml-002289	Ailuropoda melanoleuca	36.13	9.00e-149	520.00
IUUC-Atr-002859	Amborella trichopoda	65.89	0.00e+00	1128.00
IUUC-Apl-003505	Anas platyrhynchos	37.48	1.00e-137	483.00
IUUC-Aca-004339	Anolis carolinensis	35.27	5.00e-146	511.00
IUUC-Aly-005913	Arabidopsis lyrata	69.19	0.00e+00	1242.00
IUUC-Ath-006767	Arabidopsis thaliana	69.40	0.00e+00	1250.00
IUUC-Ago-007763	Ashbya gossypii	30.52	2.00e-112	399.00
IUUC-Acl-008275	Aspergillus clavatus	31.57	5.00e-85	308.00
IUUC-Afl-008457	Aspergillus flavus	29.67	9.00e-73	267.00
IUUC-Afu-008914	Aspergillus fumigatus	29.61	5.00e-86	311.00
IUUC-Ani-009225	Aspergillus nidulans	30.99	2.00e-89	323.00
IUUC-Aor-010046	Aspergillus oryzae	29.05	4.00e-99	355.00
IUUC-Ate-010337	Aspergillus terreus	28.49	2.00e-96	346.00
IUUC-Ame-010963	Astyanax mexicanus	35.60	4.00e-143	501.00
IUUC-Bgr-011973	Blumeria graminis	28.89	3.00e-101	362.00
IUUC-Bta-012462	Bos taurus	35.88	2.00e-145	509.00
IUUC-Bci-013940	Botrytis cinerea	30.88	4.00e-118	418.00
IUUC-Bol-016534	Brassica oleracea	69.85	0.00e+00	1263.00
IUUC-Bra-016781	Brassica rapa	67.98	0.00e+00	1233.00
IUUC-Cel-018581	Caenorhabditis elegans	26.75	9.00e-81	294.00
IUUC-Cja-019675	Callithrix jacchus	35.14	3.00e-154	538.00
IUUC-Cfa-020118	Canis familiaris	36.15	2.00e-149	522.00
IUUC-Cpo-021798	Cavia porcellus	36.06	4.00e-148	518.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	33.51	5.00e-45	174.00
IUUC-Csa-023547	Chlorocebus sabaeus	35.40	9.00e-146	510.00
IUUC-Cho-024518	Choloepus hoffmanni	31.34	2.00e-99	356.00
IUUC-Cin-025339	Ciona intestinalis	34.41	3.00e-151	528.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	29.47	3.00e-103	369.00
IUUC-Cne-026859	Cryptococcus neoformans	33.62	2.00e-130	459.00
IUUC-Cme-027173	Cyanidioschyzon merolae	28.37	6.00e-80	291.00
IUUC-Dre-027733	Danio rerio	35.70	3.00e-141	495.00
IUUC-Dno-029439	Dasypus novemcinctus	35.58	2.00e-143	502.00
IUUC-Dor-030329	Dipodomys ordii	33.97	2.00e-62	233.00
IUUC-Dse-031511	Dothistroma septosporum	28.94	9.00e-97	347.00
IUUC-Dme-031694	Drosophila melanogaster	32.54	1.00e-127	450.00
IUUC-Ete-032930	Echinops telfairi	39.79	2.00e-112	399.00
IUUC-Eca-033302	Equus caballus	35.84	1.00e-145	509.00
IUUC-Eeu-034516	Erinaceus europaeus	35.77	3.00e-155	541.00
IUUC-Fca-036064	Felis catus	35.73	2.00e-145	508.00
IUUC-Fal-037024	Ficedula albicollis	35.93	3.00e-149	521.00
IUUC-Fox-037787	Fusarium oxysporum	29.83	3.00e-99	355.00
IUUC-Fso-038378	Fusarium solani	30.00	7.00e-102	364.00
IUUC-Gmo-039637	Gadus morhua	36.82	3.00e-83	301.00
IUUC-Ggr-040108	Gaeumannomyces graminis	28.53	2.00e-94	340.00
IUUC-Gga-040982	Gallus gallus	34.91	3.00e-156	545.00
IUUC-Gac-041565	Gasterosteus aculeatus	36.04	9.00e-137	480.00
IUUC-Gma-043414	Glycine max	70.33	0.00e+00	1292.00
IUUC-Ggo-045463	Gorilla gorilla	35.04	2.00e-145	509.00
IUUC-Hsa-045675	Homo sapiens	35.11	1.00e-147	516.00
IUUC-Hvu-047352	Hordeum vulgare	91.70	0.00e+00	1513.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	35.04	1.00e-155	543.00
IUUC-Kpa-049164	Komagataella pastoris	31.45	7.00e-116	410.00
IUUC-Lch-050476	Latimeria chalumnae	34.62	3.00e-150	525.00
IUUC-Lpe-051556	Leersia perrieri	71.63	0.00e+00	1233.00
IUUC-Loc-052820	Lepisosteus oculatus	36.71	3.00e-153	535.00
IUUC-Lma-052961	Leptosphaeria maculans	30.38	1.00e-96	347.00
IUUC-Laf-054006	Loxodonta africana	34.35	2.00e-137	482.00
IUUC-Mcc-055037	Macaca mulatta	34.90	2.00e-146	512.00
IUUC-Mor-057280	Magnaporthe oryzae	28.92	5.00e-95	342.00
IUUC-Mpo-057408	Magnaporthe poae	28.96	4.00e-91	328.00
IUUC-Mtr-058473	Medicago truncatula	70.80	0.00e+00	1306.00
IUUC-Mla-058892	Melampsora laricipopulina	33.20	2.00e-108	386.00
IUUC-Mga-059598	Meleagris gallopavo	30.90	1.00e-107	384.00
IUUC-Mvi-060334	Microbotryum violaceum	34.13	4.00e-116	411.00
IUUC-Mmr-061239	Microcebus murinus	35.40	3.00e-144	504.00
IUUC-Mdo-062471	Monodelphis domestica	36.44	4.00e-144	504.00
IUUC-Mmu-063872	Mus musculus	36.42	6.00e-158	550.00
IUUC-Mac-064631	Musa acuminata	74.79	0.00e+00	1253.00
IUUC-Mpu-066039	Mustela putorius furo	35.92	9.00e-160	556.00
IUUC-Mlu-067485	Myotis lucifugus	35.94	9.00e-146	510.00
IUUC-Nfi-068319	Neosartorya fischeri	28.64	7.00e-99	354.00
IUUC-Ncr-068725	Neurospora crassa	29.51	1.00e-99	357.00
IUUC-Nle-069050	Nomascus leucogenys	35.22	2.00e-147	516.00
IUUC-Opr-070437	Ochotona princeps	42.18	2.00e-48	186.00
IUUC-Ont-071574	Oreochromis niloticus	36.27	4.00e-146	511.00
IUUC-Oan-072826	Ornithorhynchus anatinus	36.53	3.00e-156	545.00
IUUC-Ocu-073995	Oryctolagus cuniculus	36.00	3.00e-141	495.00
IUUC-Oba-075407	Oryza barthii	80.64	0.00e+00	1431.00
IUUC-Obr-076451	Oryza brachyantha	88.29	0.00e+00	1646.00
IUUC-Ogl-077535	Oryza glaberrima	88.45	0.00e+00	1626.00
IUUC-Ogu-077995	Oryza glumaepatula	80.22	0.00e+00	1436.00
IUUC-Oin-079431	Oryza indica	88.94	0.00e+00	1632.00
IUUC-Olo-080495	Oryza longistaminata	76.54	0.00e+00	1313.00
IUUC-Oni-082336	Oryza nivara	84.73	0.00e+00	1523.00
IUUC-Opu-084028	Oryza punctata	79.93	0.00e+00	1355.00
IUUC-Oru-084500	Oryza rufipogon	79.52	0.00e+00	1425.00
IUUC-Osa-086242	Oryza sativa	89.05	0.00e+00	1636.00
IUUC-Ola-086612	Oryzias latipes	35.88	1.00e-116	413.00
IUUC-Olu-087703	Ostreococcus lucimarinus	36.61	3.00e-155	541.00
IUUC-Oga-088572	Otolemur garnettii	35.80	4.00e-147	514.00
IUUC-Oar-090363	Ovis aries	36.57	3.00e-149	521.00
IUUC-Ptr-090477	Pan troglodytes	34.90	6.00e-145	507.00
IUUC-Pan-092914	Papio anubis	34.90	3.00e-146	511.00
IUUC-Psi-093019	Pelodiscus sinensis	34.36	3.00e-142	498.00
IUUC-Pma-094303	Petromyzon marinus	33.22	4.00e-118	418.00
IUUC-Pno-094938	Phaeosphaeria nodorum	29.80	7.00e-88	318.00
IUUC-Ppa-095720	Physcomitrella patens	53.21	0.00e+00	983.00
IUUC-Pfo-097034	Poecilia formosa	35.80	2.00e-137	482.00
IUUC-Pab-097669	Pongo abelii	35.10	4.00e-148	518.00
IUUC-Pop-098835	Populus trichocarpa	72.62	0.00e+00	1328.00
IUUC-Pca-101097	Procavia capensis	38.61	9.00e-60	224.00
IUUC-Ppe-101430	Prunus persica	72.33	0.00e+00	1356.00
IUUC-Pva-103152	Pteropus vampyrus	35.62	5.00e-149	521.00
IUUC-Pgr-103517	Puccinia graminis	30.29	4.00e-126	445.00
IUUC-Ptt-103697	Puccinia triticina	30.48	3.00e-96	345.00
IUUC-Pte-104121	Pyrenophora teres	30.37	1.00e-97	350.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	29.80	1.00e-97	350.00
IUUC-Rno-105435	Rattus norvegicus	35.41	2.00e-152	532.00
IUUC-Sce-106202	Saccharomyces cerevisiae	30.17	3.00e-100	359.00
IUUC-Sha-107272	Sarcophilus harrisii	36.49	3.00e-139	488.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	35.89	2.00e-150	525.00
IUUC-Spo-108256	Schizosaccharomyces pombe	36.35	2.00e-157	549.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	29.84	6.00e-112	398.00
IUUC-Smo-108762	Selaginella moellendorffii	54.27	0.00e+00	986.00
IUUC-Sit-110051	Setaria italica	89.61	0.00e+00	1634.00
IUUC-Sly-111181	Solanum lycopersicum	68.93	0.00e+00	1263.00
IUUC-Stu-112018	Solanum tuberosum	69.91	0.00e+00	1278.00
IUUC-Sar-113348	Sorex araneus	35.23	3.00e-102	365.00
IUUC-Sbi-114282	Sorghum bicolor	88.18	0.00e+00	1656.00
IUUC-Sre-114946	Sporisorium reilianum	30.47	7.00e-86	311.00
IUUC-Ssc-115287	Sus scrofa	36.06	4.00e-149	521.00
IUUC-Tgu-117138	Taeniopygia guttata	34.41	7.00e-122	431.00
IUUC-Tru-118232	Takifugu rubripes	36.18	5.00e-142	498.00
IUUC-Tsy-119502	Tarsius syrichta	29.15	1.00e-98	353.00
IUUC-Tni-120378	Tetraodon nigroviridis	36.32	1.00e-143	503.00
IUUC-Tca-121506	Theobroma cacao	71.05	0.00e+00	1289.00
IUUC-Tre-122166	Trichoderma reesei	29.89	6.00e-110	391.00
IUUC-Tvi-122385	Trichoderma virens	29.82	4.00e-112	398.00
IUUC-Tae-122836	Triticum aestivum	91.72	0.00e+00	1726.00
IUUC-Tur-126490	Triticum urartu	79.82	0.00e+00	1367.00
IUUC-Tme-127157	Tuber melanosporum	31.32	2.00e-110	392.00
IUUC-Tbe-127981	Tupaia belangeri	38.39	1.00e-131	463.00
IUUC-Ttr-128886	Tursiops truncatus	35.04	5.00e-145	507.00
IUUC-Uma-129439	Ustilago maydis	31.11	2.00e-92	333.00
IUUC-Vda-129760	Verticillium dahliae	29.18	1.00e-107	383.00
IUUC-Vpa-130456	Vicugna pacos	35.38	2.00e-145	509.00
IUUC-Vvi-131086	Vitis vinifera	72.14	0.00e+00	1362.00
IUUC-Xtr-131829	Xenopus tropicalis	35.70	2.00e-160	558.00
IUUC-Xma-133588	Xiphophorus maculatus	35.19	4.00e-133	468.00
IUUC-Yli-134328	Yarrowia lipolytica	31.54	4.00e-105	375.00
IUUC-Zma-135808	Zea mays	86.67	0.00e+00	1636.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence