iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-116419

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU856160

Gene Name

HOXB4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000017535.2	ENSSSCT00000019089.2	ENSSSCP00000018583.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/Other	99.56	4.00e-103	371.00	IUUC-Hsa-046919

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAMSSFLINS NYVDPKFPPC EEYSQSDYLP SDHSPGYYAG GQRRESSFQP EAGFGRRAAC 60
TVQRYAACRD PGPPPPPPPP PPPPPPPGLS PRAPAPPPSG ALLPEPGQRC EAVSSSPPPP 120

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Nucleotide Sequence
(Fasta)

GGCGGCCATT GGCTCCGAGG ATCACGTGGG CCCCTAACTT TGTTCACTTG ACAGTAAGTA 60
GGAGGGCTTT CGGAAACAGG AAAACGAGTC AGGGGTCGGA ATAAATTTTA GTATATTTTG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0217--Developmental protein
KW-0238--DNA-binding
KW-0371--Homeobox
KW-0539--Nucleus
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR009057--Homeobox-like
IPR017995--Homeobox_antennapedia
IPR001827--Homeobox_Antennapedia_CS
IPR017970--Homeobox_CS
IPR001356--Homeobox_dom
IPR020479--Homeobox_metazoa

PROSITE

PS00032--ANTENNAPEDIA
PS00027--HOMEOBOX_1
PS50071--HOMEOBOX_2

Pfam

PF00046--Homeobox

PRINTS

PR00025--ANTENNAPEDIA
PR00024--HOMEOBOX

SMART

SM00389--HOX

Gene Ontology

GO:0005813--C:centrosome
GO:0005634--C:nucleus
GO:0043565--F:sequence-specific DNA binding
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0009952--P:anterior/posterior pattern specification
GO:0048539--P:bone marrow development
GO:0008283--P:cell proliferation
GO:0060216--P:definitive hemopoiesis
GO:0048704--P:embryonic skeletal system morphogenesis
GO:0060218--P:hematopoietic stem cell differentiation
GO:0002011--P:morphogenesis of an epithelial sheet
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:2000738--P:positive regulation of stem cell differentiation
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0048103--P:somatic stem cell division
GO:0048536--P:spleen development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002156	Ailuropoda melanoleuca	66.24	1.00e-75	275.00
IUUC-Aca-004281	Anolis carolinensis	68.35	2.00e-77	281.00
IUUC-Ame-011424	Astyanax mexicanus	65.50	3.00e-72	264.00
IUUC-Bta-013580	Bos taurus	96.09	8.00e-107	379.00
IUUC-Bdi-014316	Brachypodium distachyon	47.54	9.00e-10	57.40
IUUC-Bra-017918	Brassica rapa	49.15	1.00e-09	57.00
IUUC-Cja-019422	Callithrix jacchus	89.47	3.00e-98	350.00
IUUC-Cfa-020551	Canis familiaris	92.17	5.00e-110	389.00
IUUC-Cpo-022099	Cavia porcellus	99.19	4.00e-65	239.00
IUUC-Csa-023337	Chlorocebus sabaeus	99.56	2.00e-104	371.00
IUUC-Dre-027947	Danio rerio	65.24	3.00e-74	271.00
IUUC-Dno-029094	Dasypus novemcinctus	97.81	5.00e-102	363.00
IUUC-Dme-031651	Drosophila melanogaster	29.82	8.00e-01	30.80
IUUC-Fca-035652	Felis catus	100.00	9.00e-62	228.00
IUUC-Gac-041606	Gasterosteus aculeatus	59.59	1.00e-67	249.00
IUUC-Hsa-046919	Homo sapiens	99.56	6.00e-104	369.00
IUUC-Itr-048677	Ictidomys tridecemlineatus	97.00	5.00e-111	393.00
IUUC-Lch-050353	Latimeria chalumnae	66.39	3.00e-73	267.00
IUUC-Laf-053406	Loxodonta africana	98.70	8.00e-108	382.00
IUUC-Meu-056129	Macropus eugenii	86.46	6.00e-103	366.00
IUUC-Mdo-062656	Monodelphis domestica	83.54	5.00e-102	363.00
IUUC-Mmu-064317	Mus musculus	95.65	1.00e-107	381.00
IUUC-Mpu-066715	Mustela putorius furo	100.00	8.00e-106	375.00
IUUC-Nle-069403	Nomascus leucogenys	98.68	5.00e-104	369.00
IUUC-Ont-072022	Oreochromis niloticus	63.03	2.00e-68	251.00
IUUC-Oan-073355	Ornithorhynchus anatinus	78.88	9.00e-93	332.00
IUUC-Obr-076254	Oryza brachyantha	45.00	4.00e-08	51.60
IUUC-Oga-089067	Otolemur garnettii	97.82	6.00e-105	372.00
IUUC-Oar-089454	Ovis aries	80.35	1.00e-97	348.00
IUUC-Ptr-091405	Pan troglodytes	99.56	6.00e-104	369.00
IUUC-Pan-092634	Papio anubis	99.56	2.00e-104	371.00
IUUC-Psi-093940	Pelodiscus sinensis	70.71	1.00e-77	282.00
IUUC-Pfo-097180	Poecilia formosa	57.32	1.00e-62	232.00
IUUC-Pab-097837	Pongo abelii	99.56	5.00e-104	369.00
IUUC-Pva-102648	Pteropus vampyrus	99.13	1.00e-110	392.00
IUUC-Rno-106098	Rattus norvegicus	94.78	2.00e-107	380.00
IUUC-Sha-107548	Sarcophilus harrisii	86.03	4.00e-102	363.00
IUUC-Sly-111303	Solanum lycopersicum	44.29	9.00e-09	53.90
IUUC-Tru-118619	Takifugu rubripes	61.92	3.00e-68	251.00
IUUC-Tni-120889	Tetraodon nigroviridis	60.50	3.00e-68	251.00
IUUC-Ttr-128475	Tursiops truncatus	99.13	2.00e-105	374.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence