iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006532

Ensembl Protein ID

fgenesh2_kg.355__1__AT2G46280.2

UniProt Accession

D7MXC6; D7MXC6_ARALL

Genbank Protein ID

EFH38807.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I

Genbank Nucleotide ID

GL348967

Gene Name

ARALYDRAFT_497405

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.355__1__AT2G46280.2	fgenesh2_kg.355__1__AT2G46280.2	fgenesh2_kg.355__1__AT2G46280.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.60e-28	95.8	50	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v+c++   d  +l++Gs D t k+WD+++g++l
   Q: 50   GHNGAVSCCDVsRDsSRLITGSADQTAKLWDVKSGKQL 87
           8***********77799******************987 PP

Organism

Arabidopsis lyrata

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MTPILMKGHE RPLTFLRYNR DGDLLFSCAK DHTPTLWLAH NGERLGTYRG HNGAVSCCDV 60
SRDSSRLITG SADQTAKLWD VKSGKQLFTF NFGSSARSVD FSVGDHLAVI TTDHFMGVSS 120

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Nucleotide Sequence
(Fasta)

GATGACGCCG ATCTTGATGA AGGGACATGA ACGTCCATTG ACATTCCTCA GGTACAACAG 60
AGATGGCGAT CTGCTTTTCT CCTGCGCCAA GGACCACACT CCCACCCTCT GGCTTGCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

aly:ARALYDRAFT_497405

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011534	Astyanax mexicanus	46.65	2.00e-86	311.00
IUUC-Bci-013950	Botrytis cinerea	45.26	2.00e-79	288.00
IUUC-Cin-025597	Ciona intestinalis	46.34	2.00e-82	298.00
IUUC-Dre-028567	Danio rerio	45.73	3.00e-86	310.00
IUUC-Dor-030257	Dipodomys ordii	36.90	2.00e-27	115.00
IUUC-Dme-031879	Drosophila melanogaster	47.53	1.00e-87	315.00
IUUC-Ete-032336	Echinops telfairi	40.00	8.00e-40	155.00
IUUC-Gmo-039311	Gadus morhua	45.71	8.00e-84	303.00
IUUC-Gac-042086	Gasterosteus aculeatus	45.73	2.00e-83	301.00
IUUC-Kpa-049325	Komagataella pastoris	42.20	3.00e-76	277.00
IUUC-Loc-052094	Lepisosteus oculatus	41.41	3.00e-70	258.00
IUUC-Mla-059061	Melampsora laricipopulina	43.29	1.00e-74	272.00
IUUC-Mvi-060399	Microbotryum violaceum	43.49	5.00e-76	277.00
IUUC-Ont-071765	Oreochromis niloticus	47.26	1.00e-87	315.00
IUUC-Ola-087053	Oryzias latipes	46.95	1.00e-85	309.00
IUUC-Pfo-096101	Poecilia formosa	46.95	2.00e-86	311.00
IUUC-Pgr-103479	Puccinia graminis	42.68	5.00e-76	277.00
IUUC-Ptt-103981	Puccinia triticina	42.68	1.00e-76	279.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	44.51	1.00e-82	298.00
IUUC-Spo-108314	Schizosaccharomyces pombe	45.12	2.00e-84	305.00
IUUC-Sre-115096	Sporisorium reilianum	42.77	5.00e-74	270.00
IUUC-Tru-118766	Takifugu rubripes	47.26	1.00e-86	312.00
IUUC-Tni-120197	Tetraodon nigroviridis	47.56	3.00e-87	314.00
IUUC-Ttr-128659	Tursiops truncatus	42.38	2.00e-63	235.00
IUUC-Uma-129464	Ustilago maydis	42.77	1.00e-73	269.00
IUUC-Xma-133383	Xiphophorus maculatus	46.95	2.00e-86	311.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence