iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107927

Ensembl Protein ID

EEB05569

UniProt Accession

B6JW18; B6JW18_SCHJY

Genbank Protein ID

EEB05569.1

Protein Name

Transcription factor tfiiic complex subunit sfc6

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_00585

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_00585	EEB05569	EEB05569

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-07	29.8	386	421

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtcla.f.sd.tl.lvsGsdDgtikvWDlrtg 33
           H + +t+++   ++ ++ +++ s+D+  k++Dlr+ 
   Q: 386  HDSYITSICqCaPTfPYiFLTNSYDCYTKLFDLRDP 421
           9999***973598776636**************986 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MGSRSKRSVA DLDFVDSDQN GNESYEFVEY IKNDSNAVLQ TSNEEKDQKP VTPRRSLRPR 60
RSVSRTSSAV VTPTPNRNTR TPNSQRLSSA KPSSARRTPA KSMEDKLYYL YGSESSSLSR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAGAATGCA CTTCTCTTTT TTACAAACAC ACTGTCGCTG AATTGGGGAG TATCCTGTTT 60
AATTGATTCT TTTCGTGCTT TGATTTGTGT CAATTGAGCA ATGTCAGTTC TATAAAACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Gene Ontology

GO:0005829--C:cytosol
GO:0000790--C:nuclear chromatin
GO:0000127--C:transcription factor TFIIIC complex
GO:0043035--F:chromatin insulator sequence binding
GO:0071443--F:tDNA binding
GO:0000995--F:transcription factor activity, core RNA polymerase III binding
GO:0006384--P:transcription initiation from RNA polymerase III promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dse-031233	Dothistroma septosporum	24.09	2.00e-25	108.00
IUUC-Fal-037637	Ficedula albicollis	22.61	6.00e-08	50.80
IUUC-Fso-038285	Fusarium solani	21.34	2.00e-11	62.40
IUUC-Ont-071367	Oreochromis niloticus	23.08	1.00e-08	53.10
IUUC-Pfo-097023	Poecilia formosa	26.07	1.00e-08	53.50
IUUC-Sit-110532	Setaria italica	27.47	4.00e-03	35.40
IUUC-Tru-118675	Takifugu rubripes	22.71	6.00e-08	50.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence