iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000003602.1	ENSORLT00000004490.1	ENSORLP00000004489.1
ENSORLG00000003602.1	ENSORLT00000004492.1	ENSORLP00000004491.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-25	88.0	1271	1303
UBD/Beta-Prp	4.80e-46	157.6	925	1157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           v + af  sd ++ +Gs D tik+WD+ +g+ll
   Q: 1271 VISAAFseSDQFVFTGSEDRTIKIWDVASGKLL 1303
           556789988899***************999875 PP

UBD/Beta-Prp

   S: 17   kf.spdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
            f s+d+ +l+tg+  +t+ +++++t  +   l  +h+a+v + + s+d++ lv+g+ D++i+vw++ tg  +  l g ++ v+sl 
   Q: 925  IFiSEDEMILVTGC-ERTLSLFSIDTNLADPILeLQHDAAVLSACVSNDSQRLVSGAADQLIRVWSVTTGALLDCLCGSDAPVTSLL 1010
           45377777888888.9**********8888888899*************************************************** PP
   S: 102  fspsgdklvsGshdrt.irvwdletgqcleetlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktg...kllrtltgghtds 182
           f++  d +vs+s+ +  i++w+l+ +  l+ + +   +   ++++++dg    +v     r v+ W+ +tg   +l+++l       
   Q: 1011 FFR--DLVVSASSSKSpIHLWNLKYDPRLK-PPAHIPAGSAHAALSSDGnqIFYVHHQSEREVMSWNGQTGqrcSLVERLA--VSAE 1092
           ***..*****9876644************9.7766666666666555553144456667899999***7762225788884..699* PP
   S: 183  vyslsfdsngkelvsgsldgtvklwdlq..tgecvrtlnghtdnvksvrfspnderlvsgssDgs 245
           v +l++ + ++ l+ g + gtv ++ l+  +++      +  + v+++++sp+++ l+++ +D +
   Q: 1093 VSCLELAQHKRLLLCGLTSGTVLIYPLSlpQETLCTPPPESLSGVLCLAVSPQEKNLAVAYEDSV 1157
           ***************************9987777777788899********99999998866654 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

LWIGDHPPNA LLFLRENPKQ KKQKGKEWPK RLAKFMDATA NMLLDPESQK LLAELKSQLY 60
ATSQKTTNLH CVELSRGIID PKRKEHAQYL DSLCQQFISQ MKARIEAVVS LRTTESQKKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTATGGATTG GAGACCACCC TCCGAATGCA CTGCTGTTCC TCAGAGAGAA TCCCAAACAG 60
AAGAAACAGA AGGGGAAGGA ATGGCCCAAA CGGCTCGCCA AATTCATGGA TGCCACTGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027417--P-loop_NTPase
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001525	Ailuropoda melanoleuca	33.36	0.00e+00	677.00
IUUC-Apl-003467	Anas platyrhynchos	37.07	1.00e-39	156.00
IUUC-Ame-011400	Astyanax mexicanus	44.73	0.00e+00	1136.00
IUUC-Bta-013223	Bos taurus	33.73	0.00e+00	693.00
IUUC-Cel-018404	Caenorhabditis elegans	27.97	5.00e-65	243.00
IUUC-Cja-018773	Callithrix jacchus	33.26	3.00e-128	452.00
IUUC-Cfa-020334	Canis familiaris	33.21	0.00e+00	690.00
IUUC-Cpo-022316	Cavia porcellus	31.52	1.00e-158	554.00
IUUC-Csa-023631	Chlorocebus sabaeus	33.08	0.00e+00	657.00
IUUC-Cin-025646	Ciona intestinalis	32.94	2.00e-99	357.00
IUUC-Csv-026191	Ciona savignyi	30.19	8.00e-13	67.80
IUUC-Dre-028241	Danio rerio	44.05	0.00e+00	1092.00
IUUC-Dno-029990	Dasypus novemcinctus	36.09	9.00e-61	227.00
IUUC-Dor-030869	Dipodomys ordii	42.25	6.00e-66	246.00
IUUC-Ete-033059	Echinops telfairi	28.65	6.00e-49	189.00
IUUC-Eca-033718	Equus caballus	32.80	0.00e+00	668.00
IUUC-Fca-035748	Felis catus	33.70	0.00e+00	652.00
IUUC-Gac-041507	Gasterosteus aculeatus	64.86	0.00e+00	1491.00
IUUC-Ggo-044551	Gorilla gorilla	32.39	0.00e+00	630.00
IUUC-Hsa-046787	Homo sapiens	33.00	0.00e+00	674.00
IUUC-Itr-048104	Ictidomys tridecemlineatus	30.27	5.00e-68	253.00
IUUC-Lch-049578	Latimeria chalumnae	36.72	0.00e+00	885.00
IUUC-Loc-052039	Lepisosteus oculatus	43.05	0.00e+00	1056.00
IUUC-Laf-054240	Loxodonta africana	33.58	0.00e+00	698.00
IUUC-Mcc-054657	Macaca mulatta	30.88	3.00e-155	543.00
IUUC-Meu-056591	Macropus eugenii	32.84	2.00e-130	460.00
IUUC-Mmr-061577	Microcebus murinus	33.82	0.00e+00	659.00
IUUC-Mdo-062895	Monodelphis domestica	33.64	0.00e+00	645.00
IUUC-Mmu-063866	Mus musculus	32.67	0.00e+00	667.00
IUUC-Mpu-066510	Mustela putorius furo	33.48	0.00e+00	706.00
IUUC-Mlu-067855	Myotis lucifugus	34.08	0.00e+00	667.00
IUUC-Nle-069557	Nomascus leucogenys	32.62	4.00e-172	599.00
IUUC-Opr-071196	Ochotona princeps	29.43	4.00e-27	117.00
IUUC-Ont-072070	Oreochromis niloticus	67.57	0.00e+00	1727.00
IUUC-Oan-073437	Ornithorhynchus anatinus	35.55	2.00e-141	496.00
IUUC-Ocu-074941	Oryctolagus cuniculus	45.87	1.00e-22	99.00
IUUC-Oga-088313	Otolemur garnettii	32.71	3.00e-166	579.00
IUUC-Oar-090123	Ovis aries	33.82	0.00e+00	683.00
IUUC-Ptr-090552	Pan troglodytes	28.23	1.00e-68	254.00
IUUC-Psi-093963	Pelodiscus sinensis	34.66	0.00e+00	742.00
IUUC-Pfo-096197	Poecilia formosa	65.08	0.00e+00	1649.00
IUUC-Pab-097755	Pongo abelii	27.06	4.00e-54	205.00
IUUC-Pca-100809	Procavia capensis	31.92	4.00e-94	340.00
IUUC-Pva-102554	Pteropus vampyrus	33.10	3.00e-95	343.00
IUUC-Rno-105174	Rattus norvegicus	31.45	1.00e-164	574.00
IUUC-Sha-107304	Sarcophilus harrisii	33.89	0.00e+00	711.00
IUUC-Sar-113168	Sorex araneus	33.75	3.00e-66	247.00
IUUC-Tru-118251	Takifugu rubripes	59.40	0.00e+00	1303.00
IUUC-Tsy-119276	Tarsius syrichta	34.69	7.00e-28	120.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence