iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-132218

Ensembl Protein ID

ENSXETP00000002496.2

UniProt Accession

Q28IZ5; Q28IZ5_XENTR

Genbank Protein ID

CAJ82445.1

Protein Name

Novel protein; Small nuclear ribonucleoprotein, U11/U12 25kDa subunit

Genbank Nucleotide ID

AAMC01079237

Gene Name

snrnp25; TNeu038g22.1-001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000001143.2	ENSXETT00000002496.2	ENSXETP00000002496.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	6.30e-06	26.2	84	169

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKeki..............ekk.lgippeqqrLiykGkiL.eddktLadyglkdgstihll 70
           ++v+v  +dg ++++ v   +tV++LK+ i              ++  +++ ++  +L ++G+ L ed ++L +yg+k+++ ++ +
   Q: 84   MTVRVCKADGEIMPVVVVQNATVLDLKRAIqryiqlkhqreggiQHIsWKYVWRTYHLSFSGEKLeEDSRSLREYGIKNRDEVVFV 169
           56788889999***************************99999966679999998999999***99*************9988766 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MKRCELKVMD VKTANECEND DVEQNLSYEV KQDVDEELPH AEVVDIFQEG LAMIVQDPLL 60
CDLPIQVTLE EINSQIALEY GQAMTVRVCK ADGEIMPVVV VQNATVLDLK RAIQRYIQLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGAATGAA ACGGTGTGAA CTAAAGGTGG GTAGTGGAAA TTGCGTTGAA AAACTTAACT 60
CGAAATTCTA AATTTCTACA TTTAAGTCCA GCTCCCAAAA ACTGATAACA CGAGAAGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

KEGG

xtr:549456

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bta-013418	Bos taurus	81.30	9.00e-60	221.00
IUUC-Bci-013773	Botrytis cinerea	35.29	2.30e-02	32.70
IUUC-Cja-019542	Callithrix jacchus	81.82	9.00e-65	238.00
IUUC-Cpo-021791	Cavia porcellus	79.17	4.00e-69	253.00
IUUC-Cin-025440	Ciona intestinalis	54.29	3.00e-43	166.00
IUUC-Dre-028229	Danio rerio	76.81	3.00e-66	243.00
IUUC-Eca-033616	Equus caballus	79.17	4.00e-69	252.00
IUUC-Gac-041795	Gasterosteus aculeatus	75.36	2.00e-63	234.00
IUUC-Ggo-045439	Gorilla gorilla	81.06	3.00e-64	236.00
IUUC-Hsa-045948	Homo sapiens	81.06	2.00e-64	236.00
IUUC-Itr-048331	Ictidomys tridecemlineatus	80.15	4.00e-66	243.00
IUUC-Lch-050068	Latimeria chalumnae	78.29	2.00e-60	224.00
IUUC-Mcc-054809	Macaca mulatta	81.06	2.00e-64	237.00
IUUC-Mmu-063172	Mus musculus	81.30	6.00e-60	221.00
IUUC-Mac-065187	Musa acuminata	35.16	6.00e-08	50.40
IUUC-Ocu-074308	Oryctolagus cuniculus	82.58	1.00e-64	237.00
IUUC-Oga-089042	Otolemur garnettii	81.16	2.00e-68	250.00
IUUC-Oar-089400	Ovis aries	81.16	2.00e-67	247.00
IUUC-Ptr-091264	Pan troglodytes	81.06	2.00e-64	236.00
IUUC-Pan-092931	Papio anubis	81.06	2.00e-64	237.00
IUUC-Pfo-097322	Poecilia formosa	76.09	9.00e-64	235.00
IUUC-Pab-098273	Pongo abelii	81.06	2.00e-64	236.00
IUUC-Rno-105525	Rattus norvegicus	81.30	6.00e-60	221.00
IUUC-Ssl-108605	Sclerotinia sclerotiorum	40.62	8.00e-03	34.30
IUUC-Sly-110852	Solanum lycopersicum	30.10	1.00e-09	56.60
IUUC-Stu-112094	Solanum tuberosum	30.10	6.00e-09	53.90
IUUC-Ssc-115263	Sus scrofa	80.49	2.00e-59	219.00
IUUC-Tru-117994	Takifugu rubripes	74.29	1.00e-62	231.00
IUUC-Tni-120742	Tetraodon nigroviridis	75.71	2.00e-64	238.00
IUUC-Tre-121995	Trichoderma reesei	39.39	5.60e-02	31.60
IUUC-Tvi-122372	Trichoderma virens	31.48	1.20e-01	30.40
IUUC-Vda-129722	Verticillium dahliae	40.74	2.90e-01	29.60
IUUC-Xma-133570	Xiphophorus maculatus	75.36	2.00e-63	234.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence