iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/ZnF/UBZ	77.28	0.00e+00	1045.00	IUUC-Hsa-046608
UBD/ZnF/UBZ	25.76	1.00e-19	93.20	IUUC-Sce-106137

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAPGQDLVVA LVDMDCFFVQ VEQRQNPHLR NKPCAVVQYK SWKGGGIIAV SYEARAFGVT 60
RNMWADDAKK LCPDLLLAQV RESRGKANLT KYREASVEVM EIMSHFAVIE RASIDEAYID 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGTTCTGC GGTGCGCAGG CGCATCAACC GTCTCTCTCA GCGCGCGCGG TGCTGAACTC 60
CTAATTTCCC CTGGGCTTGC TGTGGGGCGC AAACCTTCAG GCTCTGAAGG CTGTTTGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR017061--DNA_pol_eta/kappa
IPR017961--DNA_pol_Y-fam_little_finger
IPR001126--UmuC

PROSITE

PS50173--UMUC

Pfam

PF00817--IMS
PF11799--IMS_C

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0003887--F:DNA-directed DNA polymerase activity
GO:0071494--P:cellular response to UV-C
GO:0000731--P:DNA synthesis involved in DNA repair
GO:0006301--P:postreplication repair
GO:0006290--P:pyrimidine dimer repair

KEGG

rno:316235

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000901	Aegilops tauschii	46.50	5.00e-76	278.00
IUUC-Aml-001521	Ailuropoda melanoleuca	73.21	0.00e+00	979.00
IUUC-Atr-002484	Amborella trichopoda	41.59	3.00e-88	319.00
IUUC-Apl-003696	Anas platyrhynchos	42.13	2.00e-122	433.00
IUUC-Aca-005058	Anolis carolinensis	55.41	0.00e+00	697.00
IUUC-Aly-006400	Arabidopsis lyrata	40.08	2.00e-85	310.00
IUUC-Ath-007504	Arabidopsis thaliana	42.27	3.00e-87	316.00
IUUC-Ago-007927	Ashbya gossypii	26.73	1.00e-20	94.70
IUUC-Acl-008115	Aspergillus clavatus	31.65	3.00e-41	163.00
IUUC-Afl-008392	Aspergillus flavus	31.25	2.00e-43	170.00
IUUC-Afu-008955	Aspergillus fumigatus	31.40	2.00e-42	167.00
IUUC-Ani-009140	Aspergillus nidulans	29.53	2.00e-39	157.00
IUUC-Ang-009579	Aspergillus niger	30.13	2.00e-40	160.00
IUUC-Aor-010144	Aspergillus oryzae	30.99	1.00e-42	168.00
IUUC-Ate-010589	Aspergillus terreus	33.42	3.00e-46	180.00
IUUC-Ame-010824	Astyanax mexicanus	52.09	1.00e-177	616.00
IUUC-Bgr-012128	Blumeria graminis	31.20	5.00e-42	166.00
IUUC-Bta-013570	Bos taurus	71.59	0.00e+00	938.00
IUUC-Bci-013638	Botrytis cinerea	31.78	2.00e-46	180.00
IUUC-Bdi-014945	Brachypodium distachyon	42.26	1.00e-84	307.00
IUUC-Bol-016267	Brassica oleracea	44.64	8.00e-85	308.00
IUUC-Bra-017812	Brassica rapa	42.28	1.00e-82	300.00
IUUC-Cel-018475	Caenorhabditis elegans	35.38	2.00e-68	253.00
IUUC-Cja-019783	Callithrix jacchus	74.81	0.00e+00	912.00
IUUC-Cfa-021182	Canis familiaris	74.16	0.00e+00	953.00
IUUC-Cpo-021579	Cavia porcellus	74.44	0.00e+00	1008.00
IUUC-Csa-023918	Chlorocebus sabaeus	76.97	0.00e+00	1019.00
IUUC-Cho-024661	Choloepus hoffmanni	75.56	0.00e+00	1032.00
IUUC-Cin-025717	Ciona intestinalis	51.90	2.00e-78	285.00
IUUC-Csv-026134	Ciona savignyi	57.53	2.00e-46	178.00
IUUC-Cgl-026574	Colletotrichum gloeosporioides	30.81	6.00e-35	142.00
IUUC-Cne-026787	Cryptococcus neoformans	28.17	6.00e-28	119.00
IUUC-Cme-027172	Cyanidioschyzon merolae	29.34	2.00e-26	114.00
IUUC-Dre-028594	Danio rerio	60.12	3.00e-158	552.00
IUUC-Dno-029221	Dasypus novemcinctus	74.37	0.00e+00	1003.00
IUUC-Dor-030818	Dipodomys ordii	85.91	1.00e-113	404.00
IUUC-Dse-031223	Dothistroma septosporum	32.31	7.00e-38	152.00
IUUC-Dme-031727	Drosophila melanogaster	41.39	8.00e-94	338.00
IUUC-Ete-033036	Echinops telfairi	71.57	0.00e+00	936.00
IUUC-Eca-034307	Equus caballus	70.55	0.00e+00	864.00
IUUC-Eeu-035197	Erinaceus europaeus	61.00	7.00e-122	431.00
IUUC-Fca-035449	Felis catus	74.75	0.00e+00	944.00
IUUC-Fal-036901	Ficedula albicollis	59.64	3.00e-95	342.00
IUUC-Fox-037911	Fusarium oxysporum	30.36	8.00e-42	165.00
IUUC-Fso-038351	Fusarium solani	26.94	1.00e-38	154.00
IUUC-Gmo-039408	Gadus morhua	49.65	2.00e-168	585.00
IUUC-Ggr-039856	Gaeumannomyces graminis	31.48	3.00e-33	137.00
IUUC-Gga-040686	Gallus gallus	52.62	1.00e-166	580.00
IUUC-Gac-042191	Gasterosteus aculeatus	51.25	5.00e-178	617.00
IUUC-Gma-043642	Glycine max	42.07	2.00e-83	303.00
IUUC-Hsa-046608	Homo sapiens	77.28	0.00e+00	995.00
IUUC-Hvu-047627	Hordeum vulgare	42.79	3.00e-84	306.00
IUUC-Itr-048689	Ictidomys tridecemlineatus	73.15	0.00e+00	1009.00
IUUC-Kpa-049113	Komagataella pastoris	25.75	7.00e-25	108.00
IUUC-Lch-049987	Latimeria chalumnae	67.87	3.00e-88	319.00
IUUC-Lpe-051542	Leersia perrieri	42.99	3.00e-84	306.00
IUUC-Loc-052036	Lepisosteus oculatus	50.45	1.00e-154	540.00
IUUC-Lma-053317	Leptosphaeria maculans	31.79	6.00e-40	159.00
IUUC-Laf-053792	Loxodonta africana	72.40	0.00e+00	986.00
IUUC-Mcc-055144	Macaca mulatta	89.61	0.00e+00	743.00
IUUC-Meu-056553	Macropus eugenii	75.27	2.00e-147	514.00
IUUC-Mor-057207	Magnaporthe oryzae	31.30	9.00e-37	148.00
IUUC-Mpo-057497	Magnaporthe poae	31.32	2.00e-36	147.00
IUUC-Mtr-058741	Medicago truncatula	41.72	3.00e-88	319.00
IUUC-Mla-059160	Melampsora laricipopulina	30.42	6.00e-37	149.00
IUUC-Mga-059487	Meleagris gallopavo	47.05	2.00e-120	426.00
IUUC-Mvi-060508	Microbotryum violaceum	29.95	1.00e-38	154.00
IUUC-Mmr-061610	Microcebus murinus	75.67	0.00e+00	1011.00
IUUC-Mdo-061810	Monodelphis domestica	66.76	0.00e+00	849.00
IUUC-Mmu-063400	Mus musculus	88.06	0.00e+00	1100.00
IUUC-Mac-064894	Musa acuminata	41.13	3.00e-83	303.00
IUUC-Mpu-066225	Mustela putorius furo	72.31	0.00e+00	881.00
IUUC-Mlu-067052	Myotis lucifugus	75.42	0.00e+00	984.00
IUUC-Nfi-068296	Neosartorya fischeri	30.87	4.00e-41	162.00
IUUC-Ncr-068957	Neurospora crassa	32.78	8.00e-46	178.00
IUUC-Nle-069730	Nomascus leucogenys	73.07	0.00e+00	922.00
IUUC-Opr-070411	Ochotona princeps	64.84	2.00e-168	585.00
IUUC-Ont-071788	Oreochromis niloticus	65.86	4.00e-170	591.00
IUUC-Oan-073017	Ornithorhynchus anatinus	75.96	0.00e+00	711.00
IUUC-Ocu-074059	Oryctolagus cuniculus	79.75	0.00e+00	772.00
IUUC-Oba-075708	Oryza barthii	43.45	6.00e-85	308.00
IUUC-Obr-076475	Oryza brachyantha	41.92	5.00e-84	305.00
IUUC-Ogl-077868	Oryza glaberrima	43.45	5.00e-85	308.00
IUUC-Ogu-078157	Oryza glumaepatula	43.45	1.00e-84	307.00
IUUC-Oin-079707	Oryza indica	44.85	1.00e-79	290.00
IUUC-Olo-080763	Oryza longistaminata	44.42	2.00e-83	303.00
IUUC-Oni-082290	Oryza nivara	41.79	2.00e-84	306.00
IUUC-Opu-083795	Oryza punctata	42.99	3.00e-84	305.00
IUUC-Oru-085178	Oryza rufipogon	43.22	1.00e-84	307.00
IUUC-Osa-086176	Oryza sativa	43.45	6.00e-85	308.00
IUUC-Ola-087517	Oryzias latipes	50.70	4.00e-178	618.00
IUUC-Olu-087640	Ostreococcus lucimarinus	33.77	3.00e-50	192.00
IUUC-Oga-088142	Otolemur garnettii	73.10	0.00e+00	960.00
IUUC-Oar-089974	Ovis aries	71.75	0.00e+00	920.00
IUUC-Ptr-090591	Pan troglodytes	77.28	0.00e+00	994.00
IUUC-Pan-091688	Papio anubis	77.11	0.00e+00	1019.00
IUUC-Psi-092952	Pelodiscus sinensis	52.31	1.00e-153	536.00
IUUC-Pma-094704	Petromyzon marinus	59.26	2.00e-31	129.00
IUUC-Pno-094892	Phaeosphaeria nodorum	32.31	6.00e-39	155.00
IUUC-Ppa-095504	Physcomitrella patens	46.61	2.00e-74	273.00
IUUC-Pfo-096999	Poecilia formosa	49.73	7.00e-173	600.00
IUUC-Pab-098195	Pongo abelii	71.46	3.00e-176	611.00
IUUC-Pop-099023	Populus trichocarpa	41.18	5.00e-85	308.00
IUUC-Pca-100689	Procavia capensis	69.20	0.00e+00	726.00
IUUC-Ppe-101947	Prunus persica	39.96	6.00e-84	305.00
IUUC-Pva-102392	Pteropus vampyrus	74.72	0.00e+00	1001.00
IUUC-Pgr-103588	Puccinia graminis	32.50	2.00e-39	157.00
IUUC-Ptt-103860	Puccinia triticina	30.14	2.00e-34	140.00
IUUC-Pte-104326	Pyrenophora teres	30.98	5.00e-39	155.00
IUUC-Pyt-104573	Pyrenophora triticirepentis	31.25	8.00e-39	155.00
IUUC-Sce-106137	Saccharomyces cerevisiae	25.37	4.00e-21	96.30
IUUC-Sha-106467	Sarcophilus harrisii	68.23	0.00e+00	879.00
IUUC-Sja-107701	Schizosaccharomyces japonicus	30.79	8.00e-34	139.00
IUUC-Spo-108204	Schizosaccharomyces pombe	30.30	2.00e-38	154.00
IUUC-Ssl-108431	Sclerotinia sclerotiorum	31.98	2.00e-36	147.00
IUUC-Smo-109015	Selaginella moellendorffii	45.28	5.00e-73	268.00
IUUC-Sit-110280	Setaria italica	43.71	1.00e-88	320.00
IUUC-Sly-111756	Solanum lycopersicum	40.29	3.00e-81	296.00
IUUC-Stu-112504	Solanum tuberosum	41.36	4.00e-63	234.00
IUUC-Sar-113088	Sorex araneus	62.66	0.00e+00	815.00
IUUC-Sbi-114731	Sorghum bicolor	44.16	3.00e-88	319.00
IUUC-Sre-115144	Sporisorium reilianum	34.73	4.00e-21	96.70
IUUC-Ssc-115300	Sus scrofa	73.18	0.00e+00	973.00
IUUC-Tgu-117128	Taeniopygia guttata	67.76	9.00e-85	306.00
IUUC-Tru-118550	Takifugu rubripes	53.02	0.00e+00	640.00
IUUC-Tni-120908	Tetraodon nigroviridis	52.06	0.00e+00	640.00
IUUC-Tca-121449	Theobroma cacao	45.61	5.00e-84	305.00
IUUC-Tre-122135	Trichoderma reesei	29.81	4.00e-38	152.00
IUUC-Tvi-122467	Trichoderma virens	31.20	7.00e-40	159.00
IUUC-Tae-125677	Triticum aestivum	42.07	4.00e-83	302.00
IUUC-Tur-126600	Triticum urartu	42.75	1.00e-77	283.00
IUUC-Tme-126967	Tuber melanosporum	34.80	1.00e-43	171.00
IUUC-Tbe-127444	Tupaia belangeri	75.42	0.00e+00	1001.00
IUUC-Ttr-128797	Tursiops truncatus	73.10	0.00e+00	912.00
IUUC-Uma-129609	Ustilago maydis	34.13	6.00e-20	92.80
IUUC-Vda-130004	Verticillium dahliae	31.75	1.00e-41	164.00
IUUC-Vpa-130029	Vicugna pacos	85.45	6.00e-157	547.00
IUUC-Vvi-131117	Vitis vinifera	38.86	5.00e-82	298.00
IUUC-Xma-133279	Xiphophorus maculatus	51.91	1.00e-180	626.00
IUUC-Yli-134477	Yarrowia lipolytica	31.75	2.00e-25	110.00
IUUC-Zma-135837	Zea mays	46.17	5.00e-89	322.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence