iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048858

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01079802

Gene Name

SEH1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000007926.2	ENSSTOT00000007924.2	ENSSTOP00000007092.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-16	59.1	240	269

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWD 29
           H++ v+ +++  ++t l+s++dDg +++W 
   Q: 240  HNSQVWRVSWniTGTVLASSGDDGCVRLWK 269
           9**********9889**************7 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

VWDKSESGDW HCTASWKTHS GSVWRVTWAH PEFGQVLASC SFDRTAAVWE EIVGESNDKL 60
RGQSHWVKRT TLVDSRTSVT DVKFAPKHMG LMLATCSADG IVRIYEAPDV MNLSQWSLQH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCATAGGTCT GGGATAAAAG TGAAAGTGGA GATTGGCATT GTACTGCTAG CTGGAAGGTA 60
AGTATTTAAT TACTGTGAAA ATATAGCAAT TAAAAAAATG AAATAGCTGA GCGTGGTAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0061700--C:GATOR2 complex
GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring
GO:0051315--P:attachment of mitotic spindle microtubules to kinetochore
GO:0034629--P:cellular protein complex localization
GO:0034198--P:cellular response to amino acid starvation
GO:0002534--P:cytokine production involved in inflammatory response
GO:0050830--P:defense response to Gram-positive bacterium
GO:0006999--P:nuclear pore organization
GO:1904263--P:positive regulation of TORC1 signaling

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001926	Ailuropoda melanoleuca	99.29	1.00e-160	558.00
IUUC-Apl-003654	Anas platyrhynchos	94.38	1.00e-171	595.00
IUUC-Aca-004378	Anolis carolinensis	90.34	8.00e-167	578.00
IUUC-Ago-007816	Ashbya gossypii	31.31	2.00e-38	152.00
IUUC-Ame-011945	Astyanax mexicanus	83.39	1.00e-149	521.00
IUUC-Bta-013306	Bos taurus	98.12	2.00e-166	577.00
IUUC-Bdi-014594	Brachypodium distachyon	28.91	9.00e-31	127.00
IUUC-Bol-016565	Brassica oleracea	26.50	1.00e-27	117.00
IUUC-Bra-017831	Brassica rapa	26.50	1.00e-27	117.00
IUUC-Cel-018235	Caenorhabditis elegans	39.65	7.00e-63	233.00
IUUC-Cja-018849	Callithrix jacchus	98.75	2.00e-165	574.00
IUUC-Cfa-020841	Canis familiaris	89.68	1.00e-157	551.00
IUUC-Cpo-021379	Cavia porcellus	96.56	2.00e-164	571.00
IUUC-Csa-023900	Chlorocebus sabaeus	99.06	9.00e-167	579.00
IUUC-Cho-024660	Choloepus hoffmanni	97.48	2.00e-178	617.00
IUUC-Cin-025471	Ciona intestinalis	54.02	6.00e-89	320.00
IUUC-Csv-026242	Ciona savignyi	59.53	3.00e-74	270.00
IUUC-Dre-028068	Danio rerio	81.82	6.00e-159	553.00
IUUC-Dno-029981	Dasypus novemcinctus	90.21	1.00e-150	526.00
IUUC-Dme-031763	Drosophila melanogaster	56.36	7.00e-95	340.00
IUUC-Ete-032243	Echinops telfairi	62.33	6.00e-98	350.00
IUUC-Eca-033425	Equus caballus	98.44	1.00e-165	575.00
IUUC-Eeu-035119	Erinaceus europaeus	77.56	1.00e-116	412.00
IUUC-Fca-036520	Felis catus	99.02	7.00e-175	606.00
IUUC-Fal-037234	Ficedula albicollis	94.67	8.00e-175	608.00
IUUC-Gmo-039013	Gadus morhua	84.42	8.00e-154	535.00
IUUC-Gga-041059	Gallus gallus	94.69	1.00e-172	598.00
IUUC-Gac-041337	Gasterosteus aculeatus	88.47	4.00e-149	520.00
IUUC-Ggo-044944	Gorilla gorilla	99.06	0.00e+00	629.00
IUUC-Hsa-046038	Homo sapiens	98.75	0.00e+00	627.00
IUUC-Hvu-047455	Hordeum vulgare	30.00	3.00e-32	131.00
IUUC-Kpa-049201	Komagataella pastoris	35.38	2.00e-38	152.00
IUUC-Lch-050466	Latimeria chalumnae	77.45	5.00e-155	540.00
IUUC-Lpe-051064	Leersia perrieri	29.86	1.00e-31	130.00
IUUC-Loc-052773	Lepisosteus oculatus	77.93	6.00e-150	523.00
IUUC-Laf-053409	Loxodonta africana	97.81	2.00e-166	578.00
IUUC-Meu-055958	Macropus eugenii	71.03	2.00e-124	438.00
IUUC-Mtr-057876	Medicago truncatula	28.36	4.00e-29	121.00
IUUC-Mga-059348	Meleagris gallopavo	94.67	8.00e-173	598.00
IUUC-Mmr-060977	Microcebus murinus	99.03	7.00e-113	399.00
IUUC-Mdo-061806	Monodelphis domestica	95.64	2.00e-175	607.00
IUUC-Mmu-064328	Mus musculus	97.58	5.00e-172	596.00
IUUC-Mac-064960	Musa acuminata	31.23	9.00e-29	120.00
IUUC-Mpu-066873	Mustela putorius furo	100.00	2.00e-161	561.00
IUUC-Mlu-067563	Myotis lucifugus	90.31	3.00e-163	567.00
IUUC-Nle-068977	Nomascus leucogenys	99.06	0.00e+00	630.00
IUUC-Opr-070773	Ochotona princeps	65.31	1.00e-88	319.00
IUUC-Ont-072644	Oreochromis niloticus	85.05	4.00e-154	537.00
IUUC-Oan-073098	Ornithorhynchus anatinus	95.33	6.00e-165	572.00
IUUC-Ocu-073911	Oryctolagus cuniculus	98.75	0.00e+00	627.00
IUUC-Obr-076089	Oryza brachyantha	28.47	2.00e-31	129.00
IUUC-Ogl-077279	Oryza glaberrima	28.42	3.00e-30	125.00
IUUC-Oin-079385	Oryza indica	28.27	5.00e-29	121.00
IUUC-Ome-081809	Oryza meridionalis	28.92	5.00e-30	125.00
IUUC-Oru-084801	Oryza rufipogon	28.42	1.00e-30	126.00
IUUC-Osa-085790	Oryza sativa	28.42	3.00e-30	125.00
IUUC-Ola-087096	Oryzias latipes	83.75	8.00e-149	519.00
IUUC-Oga-088798	Otolemur garnettii	98.44	0.00e+00	626.00
IUUC-Oar-090298	Ovis aries	98.12	1.00e-166	581.00
IUUC-Ptr-091074	Pan troglodytes	98.75	0.00e+00	629.00
IUUC-Pan-092013	Papio anubis	100.00	8.00e-121	425.00
IUUC-Psi-093508	Pelodiscus sinensis	93.12	3.00e-171	593.00
IUUC-Pma-094288	Petromyzon marinus	83.82	1.00e-83	301.00
IUUC-Ppa-095228	Physcomitrella patens	32.39	2.00e-37	149.00
IUUC-Pfo-096384	Poecilia formosa	83.49	2.00e-151	528.00
IUUC-Pab-098629	Pongo abelii	99.06	0.00e+00	630.00
IUUC-Pop-099015	Populus trichocarpa	29.23	4.00e-30	125.00
IUUC-Pca-100322	Procavia capensis	73.44	5.00e-111	393.00
IUUC-Ppe-101303	Prunus persica	26.81	3.00e-30	125.00
IUUC-Pva-102861	Pteropus vampyrus	98.12	2.00e-165	575.00
IUUC-Rno-104895	Rattus norvegicus	96.56	0.00e+00	656.00
IUUC-Sce-106420	Saccharomyces cerevisiae	32.39	1.00e-42	166.00
IUUC-Sha-106829	Sarcophilus harrisii	95.64	1.00e-175	608.00
IUUC-Sja-107923	Schizosaccharomyces japonicus	37.82	2.00e-53	202.00
IUUC-Spo-108184	Schizosaccharomyces pombe	37.09	9.00e-51	193.00
IUUC-Smo-109282	Selaginella moellendorffii	33.70	3.00e-35	141.00
IUUC-Sit-110393	Setaria italica	30.48	3.00e-31	129.00
IUUC-Sly-111125	Solanum lycopersicum	29.43	4.00e-31	128.00
IUUC-Stu-112745	Solanum tuberosum	25.86	2.00e-27	116.00
IUUC-Sar-113279	Sorex araneus	98.12	6.00e-165	573.00
IUUC-Sbi-114110	Sorghum bicolor	30.45	4.00e-33	134.00
IUUC-Ssc-115589	Sus scrofa	96.26	6.00e-177	612.00
IUUC-Tgu-117523	Taeniopygia guttata	94.38	3.00e-172	597.00
IUUC-Tru-117985	Takifugu rubripes	86.16	5.00e-156	545.00
IUUC-Tsy-118913	Tarsius syrichta	98.02	2.00e-167	581.00
IUUC-Tni-120670	Tetraodon nigroviridis	85.53	1.00e-153	535.00
IUUC-Tae-122796	Triticum aestivum	29.66	1.00e-31	130.00
IUUC-Tur-126582	Triticum urartu	28.81	1.00e-28	120.00
IUUC-Tme-126885	Tuber melanosporum	34.31	2.00e-43	169.00
IUUC-Tbe-127344	Tupaia belangeri	76.25	2.00e-113	402.00
IUUC-Ttr-128347	Tursiops truncatus	98.75	9.00e-166	575.00
IUUC-Vpa-130656	Vicugna pacos	98.59	2.00e-159	554.00
IUUC-Vvi-131103	Vitis vinifera	26.83	3.00e-30	125.00
IUUC-Xtr-132736	Xenopus tropicalis	90.28	8.00e-165	572.00
IUUC-Xma-133678	Xiphophorus maculatus	83.80	1.00e-152	532.00
IUUC-Yli-134659	Yarrowia lipolytica	38.23	6.00e-50	190.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence