iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-090970

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03078057

Gene Name

AMBRA1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000003546.5	ENSPTRT00000006673.4	ENSPTRP00000006158.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-08	32.5	93	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           gH    +c+ f ++  +l++sG+ Dg +++WDl+
   Q: 93   GHRRTPWCVTFhPTisGLIASGCLDGEVRIWDLH 126
           6777779*****76779***************97 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MKVVPEKNAV RILWGRERGA RAMGAQRLLQ ELVEDKTRWM KWEGKRVELP DSPRSTFLLA 60
FSPDRTLLAS THVNHNIYIT EVKTGKCVHS LIGHRRTPWC VTFHPTISGL IASGCLDGEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGGGATTAA TGAAGAGCCA CCAGACTATC TTTATGGAGA ATCTAGATTG GGAAGTTAAG 60
CTAAGAATGT GCATTTTTGA AAAAGTTTTT ATGGTAGAAG AGAATGTATA TCAGAGGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005829--C:cytosol
GO:0043231--C:intracellular membrane-bounded organelle
GO:0005739--C:mitochondrion
GO:0045335--C:phagocytic vesicle
GO:0006914--P:autophagy
GO:0008285--P:negative regulation of cell proliferation
GO:0043524--P:negative regulation of neuron apoptotic process
GO:0021915--P:neural tube development
GO:0098779--P:positive regulation of macromitophagy in response to mitochondrial depolarization
GO:0043552--P:positive regulation of phosphatidylinositol 3-kinase activity
GO:2000785--P:regulation of autophagosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001917	Ailuropoda melanoleuca	97.81	0.00e+00	1813.00
IUUC-Atr-002557	Amborella trichopoda	37.74	3.00e-30	127.00
IUUC-Apl-004186	Anas platyrhynchos	81.88	0.00e+00	1946.00
IUUC-Aca-004419	Anolis carolinensis	77.67	0.00e+00	1838.00
IUUC-Aly-006308	Arabidopsis lyrata	37.85	9.00e-29	122.00
IUUC-Ath-007656	Arabidopsis thaliana	36.92	3.00e-28	120.00
IUUC-Ame-011354	Astyanax mexicanus	59.17	0.00e+00	1312.00
IUUC-Bta-012455	Bos taurus	94.54	0.00e+00	2239.00
IUUC-Bdi-014580	Brachypodium distachyon	42.33	4.00e-30	126.00
IUUC-Bol-016094	Brassica oleracea	40.22	8.00e-29	122.00
IUUC-Bra-017308	Brassica rapa	40.76	8.00e-30	125.00
IUUC-Cja-019073	Callithrix jacchus	98.82	3.00e-169	588.00
IUUC-Cfa-020994	Canis familiaris	95.11	0.00e+00	1530.00
IUUC-Cpo-022101	Cavia porcellus	94.77	0.00e+00	2207.00
IUUC-Csa-023273	Chlorocebus sabaeus	98.22	0.00e+00	1637.00
IUUC-Cin-025567	Ciona intestinalis	54.64	5.00e-56	212.00
IUUC-Csv-026005	Ciona savignyi	51.26	5.00e-56	210.00
IUUC-Dre-028282	Danio rerio	58.72	0.00e+00	1298.00
IUUC-Dno-029948	Dasypus novemcinctus	96.30	0.00e+00	2227.00
IUUC-Dor-030568	Dipodomys ordii	96.78	0.00e+00	1258.00
IUUC-Ete-032864	Echinops telfairi	94.31	0.00e+00	1182.00
IUUC-Eca-034392	Equus caballus	96.76	0.00e+00	1639.00
IUUC-Eeu-034440	Erinaceus europaeus	87.98	0.00e+00	1248.00
IUUC-Fca-035359	Felis catus	94.25	0.00e+00	2189.00
IUUC-Fal-037483	Ficedula albicollis	82.25	0.00e+00	1985.00
IUUC-Gmo-039343	Gadus morhua	75.72	0.00e+00	781.00
IUUC-Gga-040787	Gallus gallus	82.79	0.00e+00	1246.00
IUUC-Gac-041321	Gasterosteus aculeatus	62.43	0.00e+00	1368.00
IUUC-Gma-044022	Glycine max	36.63	3.00e-29	123.00
IUUC-Ggo-044775	Gorilla gorilla	99.83	0.00e+00	1113.00
IUUC-Hsa-045708	Homo sapiens	99.92	0.00e+00	2343.00
IUUC-Hvu-047536	Hordeum vulgare	41.57	1.00e-29	124.00
IUUC-Itr-048376	Ictidomys tridecemlineatus	98.27	0.00e+00	1266.00
IUUC-Lch-050255	Latimeria chalumnae	70.32	0.00e+00	1425.00
IUUC-Lpe-050684	Leersia perrieri	41.76	1.00e-30	128.00
IUUC-Loc-052881	Lepisosteus oculatus	67.86	0.00e+00	1506.00
IUUC-Laf-053342	Loxodonta africana	73.27	0.00e+00	988.00
IUUC-Mcc-055848	Macaca mulatta	96.76	0.00e+00	2294.00
IUUC-Meu-056320	Macropus eugenii	85.44	0.00e+00	1102.00
IUUC-Mtr-058484	Medicago truncatula	38.54	2.00e-29	124.00
IUUC-Mga-059401	Meleagris gallopavo	85.62	0.00e+00	1680.00
IUUC-Mmr-061037	Microcebus murinus	96.47	0.00e+00	2220.00
IUUC-Mdo-062484	Monodelphis domestica	75.40	0.00e+00	1701.00
IUUC-Mmu-064090	Mus musculus	95.69	0.00e+00	2229.00
IUUC-Mac-065675	Musa acuminata	34.89	2.00e-29	124.00
IUUC-Mpu-066165	Mustela putorius furo	95.73	0.00e+00	1543.00
IUUC-Mlu-068038	Myotis lucifugus	95.31	0.00e+00	2308.00
IUUC-Nle-069361	Nomascus leucogenys	99.26	0.00e+00	1980.00
IUUC-Opr-070360	Ochotona princeps	93.64	0.00e+00	876.00
IUUC-Ont-071277	Oreochromis niloticus	63.67	0.00e+00	1372.00
IUUC-Oan-073623	Ornithorhynchus anatinus	83.19	0.00e+00	1038.00
IUUC-Ocu-074600	Oryctolagus cuniculus	97.57	0.00e+00	1420.00
IUUC-Oba-075024	Oryza barthii	38.19	5.00e-32	132.00
IUUC-Obr-076172	Oryza brachyantha	34.71	1.00e-32	135.00
IUUC-Ogl-077411	Oryza glaberrima	38.19	6.00e-32	132.00
IUUC-Ogu-078025	Oryza glumaepatula	38.19	7.00e-32	132.00
IUUC-Oni-082463	Oryza nivara	38.19	5.00e-32	133.00
IUUC-Opu-084041	Oryza punctata	38.19	1.00e-31	131.00
IUUC-Oru-085075	Oryza rufipogon	38.19	2.00e-31	131.00
IUUC-Osa-085781	Oryza sativa	38.19	6.00e-32	132.00
IUUC-Ola-086729	Oryzias latipes	63.72	0.00e+00	1400.00
IUUC-Olu-087735	Ostreococcus lucimarinus	40.32	6.00e-24	105.00
IUUC-Oga-089113	Otolemur garnettii	95.61	0.00e+00	2170.00
IUUC-Oar-090171	Ovis aries	95.71	0.00e+00	2082.00
IUUC-Pan-092778	Papio anubis	98.33	0.00e+00	1663.00
IUUC-Psi-093571	Pelodiscus sinensis	81.80	0.00e+00	1973.00
IUUC-Pma-094563	Petromyzon marinus	74.58	1.00e-106	378.00
IUUC-Ppa-095832	Physcomitrella patens	36.70	1.00e-30	128.00
IUUC-Pfo-097365	Poecilia formosa	61.26	0.00e+00	1282.00
IUUC-Pab-098647	Pongo abelii	99.31	0.00e+00	1278.00
IUUC-Pop-099742	Populus trichocarpa	40.32	1.00e-29	124.00
IUUC-Pca-101035	Procavia capensis	92.78	0.00e+00	1194.00
IUUC-Ppe-101783	Prunus persica	42.22	2.00e-29	124.00
IUUC-Pva-103187	Pteropus vampyrus	99.01	0.00e+00	942.00
IUUC-Rno-105701	Rattus norvegicus	95.69	0.00e+00	2212.00
IUUC-Sha-107612	Sarcophilus harrisii	85.76	0.00e+00	2009.00
IUUC-Smo-109107	Selaginella moellendorffii	39.66	5.00e-27	116.00
IUUC-Sit-110786	Setaria italica	38.12	2.00e-32	134.00
IUUC-Sly-110859	Solanum lycopersicum	38.10	6.00e-32	132.00
IUUC-Stu-112031	Solanum tuberosum	38.57	6.00e-32	132.00
IUUC-Sar-113242	Sorex araneus	95.86	0.00e+00	1090.00
IUUC-Ssc-116094	Sus scrofa	96.69	0.00e+00	2277.00
IUUC-Tru-118308	Takifugu rubripes	62.19	0.00e+00	1331.00
IUUC-Tsy-119552	Tarsius syrichta	94.86	0.00e+00	1247.00
IUUC-Tca-121616	Theobroma cacao	38.10	1.00e-30	128.00
IUUC-Tae-124768	Triticum aestivum	42.17	4.00e-30	126.00
IUUC-Tur-126480	Triticum urartu	42.17	2.00e-30	127.00
IUUC-Tbe-127902	Tupaia belangeri	95.65	0.00e+00	983.00
IUUC-Ttr-129278	Tursiops truncatus	94.72	0.00e+00	1207.00
IUUC-Vpa-130741	Vicugna pacos	90.37	0.00e+00	839.00
IUUC-Vvi-131437	Vitis vinifera	40.30	2.00e-29	124.00
IUUC-Xtr-132247	Xenopus tropicalis	65.12	0.00e+00	1326.00
IUUC-Xma-134277	Xiphophorus maculatus	61.63	0.00e+00	1394.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence