iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000094792.3	ENSDART00000065006.4	ENSDARP00000065005.4
ENSDARG00000094792.3	ENSDART00000162135.1	ENSDARP00000140847.1
ENSDARG00000094792.3	ENSDART00000007798.6	ENSDARP00000024168.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.40e-25	86.6	105	141
UBD/Beta-Prp	3.30e-41	142.3	16	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH+ +v +l+    d++++sGs D+ti++WDlr+ ++
   Q: 105  GHNKRVVALSMspVDDTFISGSLDKTIRLWDLRSPNC 141
           799999999999755889**************99876 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgse..Drtikvwdlstgkcvhtlk 91
           ++ ++++ i+c +fs +++ ++++s+d++i ++d ++gk  r+l++++ +v  +++ + +++ v +s+  D+ti+  +l ++k+++ + 
   Q: 16   VFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNkiDDTIRYLSLHDNKYIRYFP 104
           56678899*****************************************************9999998668****************** PP
   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlkt 168
           gh+++v++ls+sp +d+++sGs d+tir+wdl++  c       h +   + +++p+g ++++G + ++v+l+dl++
   Q: 105  GHNKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQG---LMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRS 178
           **************************************8...4455555677899*9*****************975 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MKLTDSVLRS FRVAKVFREN SDKINCFDFS SNGETVISSS DDDSIVLYDC QEGKPKRTLY 60
SKKYGVDLIR YTHAANTVVY SSNKIDDTIR YLSLHDNKYI RYFPGHNKRV VALSMSPVDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAACATTCG CAGGGGTGGT GGCCATTTTG TAAGTCACCT TGCTAGTTCT AGCTTCATCT 60
CGTCTTCCGT AATCCAGTTC ATTGACCAGT TCTGTCGGCG GGCTTTTTTA ATGTGACAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR002108--ADF-H
IPR029006--ADF-H/Gelsolin-like_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51263--ADF_H
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00241--Cofilin_ADF
PF00400--WD40

SMART

SM00102--ADF
SM00320--WD40

Gene Ontology

GO:0005622--C:intracellular

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003817	Anas platyrhynchos	85.55	0.00e+00	1041.00
IUUC-Ame-010661	Astyanax mexicanus	91.86	0.00e+00	1131.00
IUUC-Bta-013022	Bos taurus	83.39	0.00e+00	1017.00
IUUC-Cho-024409	Choloepus hoffmanni	84.07	5.00e-138	483.00
IUUC-Eca-033879	Equus caballus	80.87	0.00e+00	906.00
IUUC-Eeu-035229	Erinaceus europaeus	82.24	3.00e-144	504.00
IUUC-Fal-036843	Ficedula albicollis	85.38	0.00e+00	1034.00
IUUC-Gmo-038506	Gadus morhua	87.40	0.00e+00	1051.00
IUUC-Gac-042494	Gasterosteus aculeatus	87.33	0.00e+00	1068.00
IUUC-Ggo-045204	Gorilla gorilla	81.89	0.00e+00	992.00
IUUC-Lch-050431	Latimeria chalumnae	84.58	0.00e+00	1026.00
IUUC-Ont-071988	Oreochromis niloticus	88.44	0.00e+00	1062.00
IUUC-Psi-092972	Pelodiscus sinensis	85.24	0.00e+00	1046.00
IUUC-Pfo-096775	Poecilia formosa	88.11	0.00e+00	1080.00
IUUC-Pte-104129	Pyrenophora teres	39.13	1.00e-56	215.00
IUUC-Tgu-116465	Taeniopygia guttata	82.35	0.00e+00	941.00
IUUC-Tru-117604	Takifugu rubripes	85.55	0.00e+00	1061.00
IUUC-Tsy-119314	Tarsius syrichta	70.40	4.00e-101	360.00
IUUC-Tni-120237	Tetraodon nigroviridis	86.00	0.00e+00	1050.00
IUUC-Tur-126512	Triticum urartu	42.55	9.00e-61	227.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence