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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-007489
UUCD1 version UUC-ArT-00113
Ensembl Protein ID AT1G19750.1
UniProt Accession F4HQX6; F4HQX6_ARATH
Genbank Protein ID AEE29894.1
Protein Name Transducin/WD40 repeat-like superfamily protein
Genbank Nucleotide ID CP002684
Gene Name At1g19750; F14P1.15; F14P1_15
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G19750 AT1G19750.1 AT1G19750.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
PINAHINT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.80e-26 92.0 188 225
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
    gH d+v ++++ s+ + l +G+ Dg i+ WD+r+ +
   Q: 188 GHRDGVMSVEWstSSeWVLYTGGCDGAIRFWDIRRAGC 225
    8***********955699**************987765 PP
   

Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MWKAFKDRET GRFRSNSFAN RFKSRRILSL QLSNRKDFVS PHRGSVNSLQ VDLTEGRYLL 60
SGAADGSAAV FDVKRATDYE ASGLIAKHKC IFTVRKQHEN GHKYAISSAI WYPIDTGMFI 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007489|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGACAAGGGA GATTCGAGCT CGAGTATATA TACACATAAA GTCTGGTAAT ATCCACGAGA 60
ATCAGAAGAC GAGATGCTAG GAGAATGTGG AAGGCTTTTA AAGACAGAGA AACCGGTCGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007489|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001170 Aegilops tauschii 69.57 5.00e-56 212.00
IUUC-Aca-004708 Anolis carolinensis 32.82 1.00e-56 212.00
IUUC-Cin-025324 Ciona intestinalis 28.34 7.00e-40 157.00
IUUC-Cgl-026384 Colletotrichum gloeosporioides 30.86 8.00e-23 100.00
IUUC-Dre-028696 Danio rerio 33.58 6.00e-64 237.00
IUUC-Dse-031167 Dothistroma septosporum 28.24 2.00e-32 133.00
IUUC-Fal-037327 Ficedula albicollis 33.25 4.00e-59 220.00
IUUC-Gmo-039043 Gadus morhua 31.80 4.00e-56 211.00
IUUC-Gga-041085 Gallus gallus 33.67 3.00e-61 228.00
IUUC-Loc-051788 Lepisosteus oculatus 34.07 8.00e-65 240.00
IUUC-Meu-055929 Macropus eugenii 34.48 1.00e-56 213.00
IUUC-Mdo-062564 Monodelphis domestica 33.87 5.00e-66 244.00
IUUC-Olo-080916 Oryza longistaminata 43.57 2.00e-25 107.00
IUUC-Ola-087084 Oryzias latipes 31.94 2.00e-62 232.00
IUUC-Psi-093050 Pelodiscus sinensis 34.55 2.00e-63 235.00
IUUC-Tru-118164 Takifugu rubripes 32.92 5.00e-58 217.00
IUUC-Tsy-119151 Tarsius syrichta 30.73 2.00e-54 206.00
IUUC-Tur-126092 Triticum urartu 70.16 6.00e-50 191.00
IUUC-Xtr-132165 Xenopus tropicalis 32.32 6.00e-63 233.00
Created Date 25-Jun-2017

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