iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075327

Ensembl Protein ID

OBART09G02890.1

UniProt Accession

E6YAG0; E6YAG0_9ORYZ

Genbank Protein ID

ADD22150.1; ADD22151.1; ADD22152.1; ADD22153.1; ADD22154.1; ADD22156.1; ADD22157.1; ADD22158.1; ADD22159.1; ADD22160.1; ADD22161.1; ADD22162.1; ADD22163.1; ADD22164.1; ADD22165.1; ADD22166.1; ADD22167.1; ADD22168.1; ADD22169.1

Protein Name

Copia-like retroelement pol polyprotein

Genbank Nucleotide ID

FJ811207; FJ811208; FJ811209; FJ811210; FJ811211; FJ811213; FJ811214; FJ811215; FJ811216; FJ811217; FJ811218; FJ811219; FJ811220; FJ811221; FJ811222; FJ811223; FJ811224; FJ811225; FJ811226

Gene Name

NP39

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART09G02890	OBART09G02890.1	OBART09G02890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-25	86.8	92	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sd.tllvsGsdDgtikvWDlrtgvll 36
            +++++f   + ++l+sG+  + +++WDl + +++
   Q: 92   CIYSISFsnKGsRYLCSGGSGHIVRIWDLQRKRCI 126
           69*****973369****************998886 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MGFVDPAAPL LATCGGDTVK LFDVTVESGD PCVLAYTPAP AHPVNGVRWN HTNLIVASAG 60
DDKKISLWHK KGQNVGQLPT STVDRGDDIE ECIYSISFSN KGSRYLCSGG SGHIVRIWDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCTTTCGAA AAGAAAACTA ACAAAATCGT GTGCAAAAAC TCGAAACAAA CAGGCCGGCG 60
GCCCCATGAT TGCAGCCAGC AAGGAACCTT TGAACTCACA CTATCGAGCA ACGACACCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR005024--Snf7_fam

Pfam

PF03357--Snf7

Gene Ontology

GO:0007034--P:vacuolar transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	80.23	0.00e+00	694.00
IUUC-Aml-002397	Ailuropoda melanoleuca	29.38	3.00e-40	159.00
IUUC-Atr-002464	Amborella trichopoda	55.66	0.00e+00	740.00
IUUC-Apl-003870	Anas platyrhynchos	31.08	2.00e-37	149.00
IUUC-Aca-004925	Anolis carolinensis	29.83	5.00e-42	165.00
IUUC-Aly-005931	Arabidopsis lyrata	51.55	0.00e+00	699.00
IUUC-Ath-006681	Arabidopsis thaliana	58.49	1.00e-174	606.00
IUUC-Ame-010906	Astyanax mexicanus	30.07	7.00e-29	121.00
IUUC-Bta-013389	Bos taurus	30.43	2.00e-40	160.00
IUUC-Bdi-014340	Brachypodium distachyon	86.65	0.00e+00	1230.00
IUUC-Bol-015773	Brassica oleracea	57.75	9.00e-169	586.00
IUUC-Bra-016623	Brassica rapa	49.08	0.00e+00	630.00
IUUC-Cja-019541	Callithrix jacchus	28.37	2.00e-38	153.00
IUUC-Cfa-021218	Canis familiaris	28.73	1.00e-40	160.00
IUUC-Cpo-021697	Cavia porcellus	30.51	1.00e-38	154.00
IUUC-Csa-023620	Chlorocebus sabaeus	29.04	4.00e-39	155.00
IUUC-Cho-025105	Choloepus hoffmanni	27.71	3.00e-29	122.00
IUUC-Cin-025293	Ciona intestinalis	30.27	7.00e-23	101.00
IUUC-Csv-026234	Ciona savignyi	29.00	6.00e-20	90.50
IUUC-Dre-028251	Danio rerio	34.62	9.00e-32	131.00
IUUC-Dno-029281	Dasypus novemcinctus	30.64	3.00e-36	145.00
IUUC-Dor-031020	Dipodomys ordii	32.89	2.00e-12	67.40
IUUC-Ete-033113	Echinops telfairi	31.37	1.00e-36	147.00
IUUC-Eca-034230	Equus caballus	30.99	3.00e-36	145.00
IUUC-Eeu-034671	Erinaceus europaeus	31.58	9.00e-35	140.00
IUUC-Fca-035775	Felis catus	30.07	9.00e-38	150.00
IUUC-Fal-037557	Ficedula albicollis	31.85	1.00e-32	134.00
IUUC-Gmo-038586	Gadus morhua	31.37	1.00e-28	120.00
IUUC-Gga-040153	Gallus gallus	31.51	1.00e-35	144.00
IUUC-Gac-041385	Gasterosteus aculeatus	31.68	2.00e-32	133.00
IUUC-Gma-043049	Glycine max	55.20	0.00e+00	756.00
IUUC-Ggo-044576	Gorilla gorilla	28.85	2.00e-38	153.00
IUUC-Hsa-046198	Homo sapiens	28.85	2.00e-38	153.00
IUUC-Hvu-047794	Hordeum vulgare	98.14	6.00e-95	338.00
IUUC-Lch-050561	Latimeria chalumnae	26.58	2.00e-21	96.70
IUUC-Lpe-051469	Leersia perrieri	93.36	0.00e+00	1347.00
IUUC-Loc-052816	Lepisosteus oculatus	29.22	2.00e-27	117.00
IUUC-Laf-053880	Loxodonta africana	29.64	1.00e-33	137.00
IUUC-Mcc-054977	Macaca mulatta	29.32	3.00e-39	156.00
IUUC-Meu-056141	Macropus eugenii	34.62	1.00e-35	144.00
IUUC-Mtr-058441	Medicago truncatula	54.51	0.00e+00	735.00
IUUC-Mga-060141	Meleagris gallopavo	32.83	8.00e-36	144.00
IUUC-Mmr-061201	Microcebus murinus	30.39	2.00e-36	146.00
IUUC-Mdo-061855	Monodelphis domestica	35.19	4.00e-37	149.00
IUUC-Mmu-064342	Mus musculus	27.84	2.00e-35	143.00
IUUC-Mac-065368	Musa acuminata	64.87	0.00e+00	858.00
IUUC-Mpu-066191	Mustela putorius furo	28.10	4.00e-40	159.00
IUUC-Mlu-067310	Myotis lucifugus	30.03	2.00e-38	153.00
IUUC-Nle-069990	Nomascus leucogenys	28.85	2.00e-38	153.00
IUUC-Opr-070336	Ochotona princeps	34.70	2.00e-36	147.00
IUUC-Ont-071675	Oreochromis niloticus	32.01	1.00e-35	144.00
IUUC-Oan-072772	Ornithorhynchus anatinus	35.47	1.00e-37	150.00
IUUC-Ocu-074095	Oryctolagus cuniculus	30.07	2.00e-37	150.00
IUUC-Obr-076119	Oryza brachyantha	94.53	0.00e+00	1356.00
IUUC-Ogl-077820	Oryza glaberrima	99.73	0.00e+00	1407.00
IUUC-Ogu-078679	Oryza glumaepatula	94.14	0.00e+00	1580.00
IUUC-Oin-079891	Oryza indica	99.69	0.00e+00	1725.00
IUUC-Olo-080414	Oryza longistaminata	99.56	0.00e+00	1288.00
IUUC-Ome-081888	Oryza meridionalis	97.96	0.00e+00	1373.00
IUUC-Oni-082417	Oryza nivara	99.73	0.00e+00	1407.00
IUUC-Opu-083393	Oryza punctata	97.02	0.00e+00	1414.00
IUUC-Oru-084698	Oryza rufipogon	97.44	0.00e+00	1668.00
IUUC-Osa-086121	Oryza sativa	99.73	0.00e+00	1407.00
IUUC-Ola-086806	Oryzias latipes	32.18	2.00e-35	143.00
IUUC-Olu-087591	Ostreococcus lucimarinus	27.86	8.00e-21	94.40
IUUC-Oga-088622	Otolemur garnettii	30.07	2.00e-37	149.00
IUUC-Oar-090391	Ovis aries	31.01	2.00e-40	159.00
IUUC-Ptr-091036	Pan troglodytes	29.12	2.00e-38	153.00
IUUC-Pan-092576	Papio anubis	29.32	3.00e-39	155.00
IUUC-Psi-093450	Pelodiscus sinensis	30.38	5.00e-40	158.00
IUUC-Pma-094101	Petromyzon marinus	34.95	2.00e-33	135.00
IUUC-Ppa-095262	Physcomitrella patens	47.32	0.00e+00	634.00
IUUC-Pfo-097142	Poecilia formosa	30.62	4.00e-33	135.00
IUUC-Pab-097829	Pongo abelii	28.51	1.00e-38	154.00
IUUC-Pop-099687	Populus trichocarpa	62.89	0.00e+00	640.00
IUUC-Pca-100217	Procavia capensis	28.14	9.00e-30	124.00
IUUC-Ppe-101502	Prunus persica	57.14	0.00e+00	740.00
IUUC-Pva-102736	Pteropus vampyrus	30.39	3.00e-38	152.00
IUUC-Rno-104977	Rattus norvegicus	30.07	8.00e-36	144.00
IUUC-Sha-107003	Sarcophilus harrisii	35.19	5.00e-38	152.00
IUUC-Smo-109328	Selaginella moellendorffii	51.76	4.00e-144	504.00
IUUC-Sit-109796	Setaria italica	85.52	0.00e+00	1201.00
IUUC-Sly-110941	Solanum lycopersicum	55.05	0.00e+00	728.00
IUUC-Stu-112314	Solanum tuberosum	55.44	0.00e+00	731.00
IUUC-Sar-112926	Sorex araneus	25.49	5.00e-27	115.00
IUUC-Sbi-113822	Sorghum bicolor	80.07	0.00e+00	899.00
IUUC-Ssc-116242	Sus scrofa	30.85	1.00e-36	146.00
IUUC-Tgu-116765	Taeniopygia guttata	32.19	2.00e-33	136.00
IUUC-Tru-117738	Takifugu rubripes	29.01	6.00e-34	138.00
IUUC-Tsy-118856	Tarsius syrichta	34.25	1.00e-35	143.00
IUUC-Tni-120871	Tetraodon nigroviridis	31.10	4.00e-37	149.00
IUUC-Tca-120965	Theobroma cacao	57.37	0.00e+00	744.00
IUUC-Tae-124830	Triticum aestivum	85.58	0.00e+00	1189.00
IUUC-Tur-126840	Triticum urartu	84.51	0.00e+00	1145.00
IUUC-Ttr-128551	Tursiops truncatus	30.00	5.00e-31	129.00
IUUC-Vpa-130324	Vicugna pacos	31.05	3.00e-39	156.00
IUUC-Vvi-131699	Vitis vinifera	57.73	0.00e+00	768.00
IUUC-Xtr-131956	Xenopus tropicalis	32.20	4.00e-41	162.00
IUUC-Xma-132982	Xiphophorus maculatus	30.94	1.00e-33	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence