iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028201

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ring finger protein 38

Genbank Nucleotide ID

CR936846

Gene Name

rnf38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000062055.6	ENSDART00000139241.1	ENSDARP00000113766.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.60e-08	33.5	621	662

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C++df+    ++vlpC+H fha+C+ kw       + + +CP+Cr
   Q: 621  CVVCMCDFESRqlLRVLPCNHEFHAKCVDKW------LKANRTCPICR 662
           ********4434599****************......**********8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MPIATTGHSA SREPRVCSPD PVPKRADLCE DAGAQPAEYG GLEGGHSLGS TRLSGALESS 60
SAASFSPPTS PFLLHHHHHH HHHHPHPVTM EPPRTRSRSR SGFYHGGLSN PNGNSGSGGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGCTGTGA AATCGCGCTG ATGGTCTGTC ACATTATTTC TCACTGACAC CGTCTGAGCG 60
CAGGAGCACC ACGCCAAAAG ATCAGCTCAA AAACACTTCA TAACACACAG CTCCACTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

dre:566820

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001093	Aegilops tauschii	32.74	4.00e-16	79.70
IUUC-Aml-001752	Ailuropoda melanoleuca	68.01	8.00e-138	483.00
IUUC-Atr-003122	Amborella trichopoda	45.95	2.00e-15	77.40
IUUC-Apl-003246	Anas platyrhynchos	69.36	2.00e-139	489.00
IUUC-Aca-005355	Anolis carolinensis	67.83	8.00e-136	477.00
IUUC-Aly-005825	Arabidopsis lyrata	40.00	9.00e-14	71.20
IUUC-Bta-012401	Bos taurus	69.80	1.00e-130	459.00
IUUC-Bdi-014369	Brachypodium distachyon	38.38	2.00e-16	79.30
IUUC-Cja-018848	Callithrix jacchus	69.00	3.00e-139	488.00
IUUC-Cfa-020501	Canis familiaris	69.30	1.00e-132	466.00
IUUC-Cpo-021722	Cavia porcellus	68.67	5.00e-137	481.00
IUUC-Csa-024088	Chlorocebus sabaeus	70.68	2.00e-133	469.00
IUUC-Cho-024540	Choloepus hoffmanni	67.41	2.00e-80	293.00
IUUC-Cin-025552	Ciona intestinalis	63.21	4.00e-36	143.00
IUUC-Dno-029482	Dasypus novemcinctus	67.81	1.00e-138	486.00
IUUC-Dor-030261	Dipodomys ordii	63.65	7.00e-130	457.00
IUUC-Dse-031302	Dothistroma septosporum	47.73	6.00e-11	62.80
IUUC-Dme-032187	Drosophila melanogaster	64.29	4.00e-44	174.00
IUUC-Ete-032580	Echinops telfairi	64.06	1.00e-128	453.00
IUUC-Eca-033264	Equus caballus	72.15	1.00e-135	476.00
IUUC-Eeu-035181	Erinaceus europaeus	60.56	7.00e-111	394.00
IUUC-Fca-036484	Felis catus	68.01	4.00e-138	484.00
IUUC-Fal-037568	Ficedula albicollis	67.75	7.00e-139	487.00
IUUC-Gmo-038591	Gadus morhua	75.00	3.00e-118	418.00
IUUC-Gga-040685	Gallus gallus	70.48	2.00e-133	469.00
IUUC-Gac-042255	Gasterosteus aculeatus	68.05	7.00e-130	457.00
IUUC-Gma-043251	Glycine max	41.00	1.00e-15	77.40
IUUC-Ggo-044571	Gorilla gorilla	69.28	3.00e-139	488.00
IUUC-Hsa-046118	Homo sapiens	69.28	3.00e-139	488.00
IUUC-Hvu-047311	Hordeum vulgare	34.78	4.00e-15	75.10
IUUC-Itr-048953	Ictidomys tridecemlineatus	69.67	7.00e-138	483.00
IUUC-Lch-050401	Latimeria chalumnae	67.20	2.00e-140	492.00
IUUC-Lpe-051226	Leersia perrieri	44.74	3.00e-15	76.30
IUUC-Loc-052875	Lepisosteus oculatus	79.80	6.00e-148	516.00
IUUC-Laf-054381	Loxodonta africana	68.65	5.00e-137	481.00
IUUC-Mcc-055576	Macaca mulatta	69.28	3.00e-139	488.00
IUUC-Meu-056433	Macropus eugenii	71.21	2.00e-109	389.00
IUUC-Mla-058928	Melampsora laricipopulina	40.91	6.00e-11	60.80
IUUC-Mga-059597	Meleagris gallopavo	67.15	2.00e-121	429.00
IUUC-Mmr-061247	Microcebus murinus	69.28	6.00e-139	487.00
IUUC-Mdo-061822	Monodelphis domestica	69.08	9.00e-135	473.00
IUUC-Mmu-064200	Mus musculus	69.73	2.00e-138	485.00
IUUC-Mac-065545	Musa acuminata	39.18	2.00e-16	80.10
IUUC-Mpu-066571	Mustela putorius furo	68.01	5.00e-138	484.00
IUUC-Mlu-067948	Myotis lucifugus	67.94	1.00e-139	489.00
IUUC-Nle-069466	Nomascus leucogenys	69.28	3.00e-139	488.00
IUUC-Ont-072424	Oreochromis niloticus	69.67	2.00e-145	509.00
IUUC-Oan-073236	Ornithorhynchus anatinus	67.46	2.00e-123	436.00
IUUC-Ocu-073866	Oryctolagus cuniculus	71.94	3.00e-143	502.00
IUUC-Obr-076920	Oryza brachyantha	38.14	2.00e-15	76.60
IUUC-Opu-083391	Oryza punctata	38.14	3.00e-15	75.90
IUUC-Ola-086904	Oryzias latipes	69.30	2.00e-115	409.00
IUUC-Oga-087997	Otolemur garnettii	69.08	5.00e-139	488.00
IUUC-Oar-090272	Ovis aries	68.47	4.00e-136	478.00
IUUC-Ptr-091566	Pan troglodytes	69.28	3.00e-139	488.00
IUUC-Pan-091884	Papio anubis	69.28	2.00e-139	489.00
IUUC-Pfo-096604	Poecilia formosa	60.22	2.00e-155	543.00
IUUC-Pab-098694	Pongo abelii	70.68	2.00e-133	469.00
IUUC-Ppe-102055	Prunus persica	36.67	1.00e-15	77.40
IUUC-Pva-103055	Pteropus vampyrus	66.46	1.00e-124	440.00
IUUC-Rno-105006	Rattus norvegicus	71.93	6.00e-146	510.00
IUUC-Sar-112966	Sorex araneus	69.30	2.00e-132	466.00
IUUC-Sbi-114529	Sorghum bicolor	47.14	6.00e-15	75.50
IUUC-Ssc-115502	Sus scrofa	68.01	1.00e-137	483.00
IUUC-Tgu-117480	Taeniopygia guttata	68.79	8.00e-137	480.00
IUUC-Tru-118277	Takifugu rubripes	60.94	8.00e-116	410.00
IUUC-Tsy-118844	Tarsius syrichta	65.06	1.00e-121	430.00
IUUC-Tni-120282	Tetraodon nigroviridis	60.33	8.00e-120	424.00
IUUC-Tca-121858	Theobroma cacao	41.11	2.00e-16	80.10
IUUC-Ttr-129073	Tursiops truncatus	66.46	2.00e-124	439.00
IUUC-Vpa-130240	Vicugna pacos	76.13	2.00e-117	416.00
IUUC-Vvi-131462	Vitis vinifera	40.00	2.00e-17	82.80
IUUC-Xtr-131963	Xenopus tropicalis	71.25	2.00e-145	508.00
IUUC-Xma-133395	Xiphophorus maculatus	61.15	7.00e-156	544.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence