iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-050986

Ensembl Protein ID

LPERR11G11390.1

UniProt Accession

A0A0D9XSB3; A0A0D9XSB3_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR11G11390	LPERR11G11390.1	LPERR11G11390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-38	130.0	111	143
UBD/Beta-Prp	2.00e-70	238.2	80	314

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gHtd v+++af sd +ll++Gs Dg i vW++ 
   Q: 111  GHTDTVCAVAFsSDgNLLACGSFDGRINVWNTA 143
           8***********999****************75 PP

UBD/Beta-Prp

   S: 13   itcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsps 105
           i++v++   d s++a+g++d++  +w++ +        gh+++v av fs+dg++l+ gs D+ i+vw+  t++   tl+g  +    l+++p 
   Q: 80   IYSVACsPTDASVVASGGKDDRGFLWKIGS-------TGHTDTVCAVAFSSDGNLLACGSFDGRINVWNTATRTLQGTLEGSGSGFEWLKWHPR 166
           6667774568899***************99.......9******************************************************** PP
   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvyslsfdsngkelvs 197
           g+ +++Gs+d  + +w+ ++++ l+ t++gh+++v+c  + pdg+l+ +Gs+D+ +r+Wd +t++  +     g+htd  ++ls++s+++ +vs
   Q: 167  GHLIIAGSEDCNLWMWNADHNTILN-TFAGHSSTVTCGDFTPDGKLICTGSDDSSLRIWDPRTAQSRHVVrgHGYHTDGLTCLSITSDSQTIVS 259
           *************************.***********************************99999999988899******************* PP
   S: 198  gsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlr 252
           gs+d++v ++++ +g++v +l ght  + +v  sp  ++++ g++D+ + iWdl 
   Q: 260  GSKDNSVHVVNINSGQVVGSLDGHTGSIECVGISPSYNWVAIGAMDQKLIIWDLS 314
           *****************************************************86 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MSISGEVPGE GFDGEEVFIN EEDIINEIPI DEEDLPDRDD EDDDGVGDLQ EDDSQYAFRA 60
HTGKLVEKIK IVLVLIVDEI YSVACSPTDA SVVASGGKDD RGFLWKIGST GHTDTVCAVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAAATCTC CATCGACACG ATTTTTTTCT CCCCTGCGGC GGCAGCGTCG GCTCCTGCCT 60
CTTCGTCCCT CACCTCGCGC CGCCGCCAAC TCGTGGCACT GTGCCCTTTC TCGCGAGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-044168	Glycine max	55.19	3.00e-117	414.00
IUUC-Mtr-057759	Medicago truncatula	53.68	5.00e-99	353.00
IUUC-Opr-070337	Ochotona princeps	32.23	1.00e-45	176.00
IUUC-Pop-099761	Populus trichocarpa	59.27	9.00e-118	416.00
IUUC-Tru-117851	Takifugu rubripes	30.88	3.00e-50	191.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence