iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-027990

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Nucleoporin 37

Genbank Nucleotide ID

BX510924

Gene Name

nup37

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000094191.2	ENSDART00000133160.2	ENSDARP00000120939.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-10	41.3	122	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gHt+ ++ l f   + + ++s sdD+t++vWDl
   Q: 122  GHTSYINHLVFepAEgKQIASVSDDHTCRVWDL 154
           8***********844699**************8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MPDDTVRSAS YTVPCEDYVH VVEFSPYDCG SPASLLAYGG NKYVVVGTCR FKEEDAEVEG 60
VEFNSLQVFM HGVRVDAIAW SPETHLDKLP PVIRFSTAAA DRKIRLWTSD LQNSCDVKVM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCTCTTTT TTTTTTTTTT TTTGACGAAC CACGTTGTCA ACCAATATTG GCTCTTTTGT 60
TCACGTGCAT AGAGCTGTCG AAGTTACAGT AAACACCACT TGGTGGCGCT CAAATACTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0031080--C:nuclear pore outer ring

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002109	Ailuropoda melanoleuca	69.02	6.00e-136	476.00
IUUC-Aca-004272	Anolis carolinensis	69.33	2.00e-142	498.00
IUUC-Bta-012525	Bos taurus	68.10	1.00e-140	492.00
IUUC-Cfa-020623	Canis familiaris	69.63	3.00e-143	501.00
IUUC-Cpo-021545	Cavia porcellus	65.03	9.00e-137	479.00
IUUC-Csa-023698	Chlorocebus sabaeus	69.02	7.00e-142	496.00
IUUC-Cho-024401	Choloepus hoffmanni	67.32	6.00e-107	380.00
IUUC-Cin-025648	Ciona intestinalis	33.96	6.00e-41	161.00
IUUC-Csv-025913	Ciona savignyi	32.70	2.00e-39	155.00
IUUC-Dor-031077	Dipodomys ordii	67.28	2.00e-138	485.00
IUUC-Dme-031831	Drosophila melanogaster	31.42	3.00e-38	152.00
IUUC-Ete-032819	Echinops telfairi	66.87	1.00e-138	485.00
IUUC-Eca-033212	Equus caballus	68.10	3.00e-141	494.00
IUUC-Fca-036071	Felis catus	66.16	2.00e-139	488.00
IUUC-Fal-036718	Ficedula albicollis	71.47	1.00e-148	519.00
IUUC-Gmo-039710	Gadus morhua	75.77	2.00e-151	528.00
IUUC-Gga-041026	Gallus gallus	69.94	4.00e-147	513.00
IUUC-Gac-041726	Gasterosteus aculeatus	80.06	3.00e-160	557.00
IUUC-Ggo-045372	Gorilla gorilla	68.71	3.00e-141	494.00
IUUC-Hsa-046002	Homo sapiens	69.02	9.00e-142	496.00
IUUC-Itr-048542	Ictidomys tridecemlineatus	67.18	6.00e-140	490.00
IUUC-Lch-049456	Latimeria chalumnae	76.69	5.00e-145	507.00
IUUC-Loc-052159	Lepisosteus oculatus	64.29	8.00e-128	449.00
IUUC-Laf-053514	Loxodonta africana	69.02	2.00e-143	501.00
IUUC-Mcc-055148	Macaca mulatta	69.02	9.00e-142	496.00
IUUC-Meu-056644	Macropus eugenii	57.06	6.00e-112	397.00
IUUC-Mga-060061	Meleagris gallopavo	69.94	5.00e-147	513.00
IUUC-Mmr-061448	Microcebus murinus	68.10	4.00e-142	497.00
IUUC-Mdo-063006	Monodelphis domestica	71.17	2.00e-148	518.00
IUUC-Mmu-063269	Mus musculus	66.56	8.00e-139	486.00
IUUC-Mpu-066663	Mustela putorius furo	69.94	1.00e-143	502.00
IUUC-Nle-069989	Nomascus leucogenys	69.02	9.00e-142	496.00
IUUC-Ont-072544	Oreochromis niloticus	77.91	2.00e-154	538.00
IUUC-Oan-073360	Ornithorhynchus anatinus	70.77	6.00e-146	510.00
IUUC-Ola-087370	Oryzias latipes	74.85	2.00e-145	508.00
IUUC-Oar-089696	Ovis aries	67.79	8.00e-141	493.00
IUUC-Ptr-091333	Pan troglodytes	69.02	9.00e-142	496.00
IUUC-Pan-091814	Papio anubis	69.02	9.00e-142	496.00
IUUC-Psi-093497	Pelodiscus sinensis	72.09	2.00e-149	521.00
IUUC-Pfo-096789	Poecilia formosa	78.90	1.00e-156	545.00
IUUC-Pab-098451	Pongo abelii	68.71	2.00e-141	495.00
IUUC-Pca-101057	Procavia capensis	55.11	8.00e-87	313.00
IUUC-Pva-102866	Pteropus vampyrus	68.71	5.00e-142	497.00
IUUC-Rno-106000	Rattus norvegicus	66.56	3.00e-138	484.00
IUUC-Sha-106639	Sarcophilus harrisii	72.39	1.00e-149	522.00
IUUC-Ssc-115982	Sus scrofa	67.15	1.00e-113	402.00
IUUC-Tgu-116575	Taeniopygia guttata	71.17	3.00e-148	517.00
IUUC-Tru-117729	Takifugu rubripes	77.61	2.00e-155	541.00
IUUC-Tsy-118870	Tarsius syrichta	57.98	2.00e-111	395.00
IUUC-Tni-120524	Tetraodon nigroviridis	78.72	3.00e-156	544.00
IUUC-Ttr-128693	Tursiops truncatus	63.19	4.00e-122	431.00
IUUC-Vpa-130328	Vicugna pacos	65.93	7.00e-127	446.00
IUUC-Xtr-132017	Xenopus tropicalis	65.95	2.00e-136	478.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence