iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gga-041147

UUCD1 version

UUC-GaG-00248

Ensembl Protein ID

ENSGALP00000013398.4

UniProt Accession

Q5F3I7; E1C4U3; Q5F3I7_CHICK

Genbank Protein ID

CAH65297.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AADN04000052

Gene Name

TAF5; RCJMB04_15p4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000008241.4	ENSGALT00000013413.4	ENSGALP00000013398.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-46	155.0	610	648
UBD/Beta-Prp	1.00e-86	291.2	458	779

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++vtc +f ++ +++++Gs D t+++WD+  g++++
   Q: 610  GHLADVTCTRFhPNsNYIATGSADRTVRLWDVLNGNCVR 648
           89**********777*****************9999986 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkl...............................lrslsgheaevtavkfspdgkilvtg 70
           +t+v++++d+s+++ g++d+t++vw+vt++kl                               l+ l+gh+++v+ ++fspd+++l+++
   Q: 458  LTAVDITDDSSMIVGGFADSTVRVWSVTPKKLrsvkaaadlslidkesddvlerimdektaseLKILYGHSGPVYGTSFSPDRNYLLSC 546
           7999************************************************************************************* PP
   S: 71   seDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr 159
           seD+t+++w+l+t++c++ +kgh++ v++++fsp+g+++vsG+hdr++r+w ++++q l+ +++gh + v+c+++hp++n++++Gs+Dr
   Q: 547  SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVTCTRFHPNSNYIATGSADR 634
           ************************************************************.**************************** PP
   S: 160  tvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
           tvrlWd+ +g+++r +tg h+++++sl+f++ng++l++g++dg+v lwd+ +g +v +l+ghtd+++ +rfs+++e+l+sgs+D+++r+
   Q: 635  TVRLWDVLNGNCVRIFTG-HKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRL 722
           *****************9.********************************************************************** PP
   S: 249  W.......dlrsgdllktlqlhn..............ssvisvavlsfgdnvlvlgs 284
           W       dl+++d+++++ + n              +++++v +l+f++++l+l++
   Q: 723  WdavkafeDLETDDFTTATGHINlpensqdlllgtymTKSTPVVHLHFTRRNLLLAA 779
           *************************************************99998875 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MAAVPEEPAE VVAVKPDPEA GTPPQPPAAP PATAAPPAPS AAAAEGETAG SAGDASSAKP 60
SAPGPAASPA ALDRQTLVAV LQFLRRSNLR ESEEILRREA RLLGEDLGAA ALSPAGAGLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATGGGGGG CGATGCAAGA TGGCGGCGGT ACCTGAGGAG CCGGCGGAGG TTGTCGCGGT 60
GAAGCCGGAC CCAGAGGCGG GAACGCCGCC GCAGCCCCCC GCCGCTCCCC CCGCTACCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0000790--C:nuclear chromatin
GO:0005669--C:transcription factor TFIID complex
GO:0033276--C:transcription factor TFTC complex
GO:0004402--F:histone acetyltransferase activity
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0044212--F:transcription regulatory region DNA binding
GO:0006367--P:transcription initiation from RNA polymerase II promoter

KEGG

gga:423872

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000851	Aegilops tauschii	52.36	1.00e-69	256.00
IUUC-Aml-001607	Ailuropoda melanoleuca	87.40	0.00e+00	1192.00
IUUC-Atr-003136	Amborella trichopoda	46.76	5.00e-96	345.00
IUUC-Apl-004193	Anas platyrhynchos	97.56	0.00e+00	1182.00
IUUC-Aca-004522	Anolis carolinensis	85.03	0.00e+00	1194.00
IUUC-Aly-006476	Arabidopsis lyrata	38.18	5.00e-114	404.00
IUUC-Ath-006587	Arabidopsis thaliana	46.48	3.00e-87	315.00
IUUC-Ago-007736	Ashbya gossypii	42.07	3.00e-93	336.00
IUUC-Acl-008092	Aspergillus clavatus	36.98	1.00e-77	283.00
IUUC-Afl-008659	Aspergillus flavus	36.30	9.00e-79	288.00
IUUC-Afu-008902	Aspergillus fumigatus	37.44	2.00e-78	287.00
IUUC-Ani-009462	Aspergillus nidulans	37.88	2.00e-79	290.00
IUUC-Aor-010083	Aspergillus oryzae	36.30	9.00e-79	288.00
IUUC-Ate-010271	Aspergillus terreus	37.00	1.00e-78	287.00
IUUC-Ame-010721	Astyanax mexicanus	79.63	0.00e+00	1111.00
IUUC-Bgr-012257	Blumeria graminis	29.89	9.00e-76	278.00
IUUC-Bta-013539	Bos taurus	87.71	0.00e+00	1196.00
IUUC-Bci-013737	Botrytis cinerea	28.31	1.00e-77	284.00
IUUC-Bdi-015041	Brachypodium distachyon	48.34	3.00e-84	305.00
IUUC-Bol-015483	Brassica oleracea	37.25	8.00e-112	397.00
IUUC-Bra-017147	Brassica rapa	36.97	7.00e-112	397.00
IUUC-Cel-018451	Caenorhabditis elegans	33.67	2.00e-85	309.00
IUUC-Cja-018881	Callithrix jacchus	86.85	0.00e+00	1175.00
IUUC-Cfa-020056	Canis familiaris	88.41	0.00e+00	1204.00
IUUC-Cpo-021454	Cavia porcellus	90.45	0.00e+00	1177.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	39.74	2.00e-52	199.00
IUUC-Csa-023045	Chlorocebus sabaeus	94.56	0.00e+00	1121.00
IUUC-Cho-024284	Choloepus hoffmanni	81.90	0.00e+00	899.00
IUUC-Cin-025457	Ciona intestinalis	60.44	7.00e-101	359.00
IUUC-Csv-025882	Ciona savignyi	50.78	6.00e-179	620.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	28.49	2.00e-74	273.00
IUUC-Cne-026876	Cryptococcus neoformans	38.20	4.00e-71	262.00
IUUC-Cme-027302	Cyanidioschyzon merolae	34.72	9.00e-103	367.00
IUUC-Dre-027980	Danio rerio	79.33	0.00e+00	1078.00
IUUC-Dno-028863	Dasypus novemcinctus	94.31	0.00e+00	1170.00
IUUC-Dor-030561	Dipodomys ordii	94.74	0.00e+00	1165.00
IUUC-Dse-031547	Dothistroma septosporum	30.80	9.00e-80	291.00
IUUC-Dme-031917	Drosophila melanogaster	45.64	4.00e-148	518.00
IUUC-Ete-032319	Echinops telfairi	76.39	0.00e+00	883.00
IUUC-Eca-033927	Equus caballus	86.47	0.00e+00	1194.00
IUUC-Eeu-034449	Erinaceus europaeus	94.94	0.00e+00	933.00
IUUC-Fca-036325	Felis catus	87.69	0.00e+00	1186.00
IUUC-Fal-036604	Ficedula albicollis	98.52	0.00e+00	1199.00
IUUC-Fox-038049	Fusarium oxysporum	32.87	2.00e-49	190.00
IUUC-Fso-038302	Fusarium solani	35.39	2.00e-54	207.00
IUUC-Gmo-038832	Gadus morhua	82.67	0.00e+00	1013.00
IUUC-Ggr-039878	Gaeumannomyces graminis	28.57	3.00e-71	263.00
IUUC-Gac-041373	Gasterosteus aculeatus	78.20	0.00e+00	1067.00
IUUC-Gma-043230	Glycine max	37.97	2.00e-118	419.00
IUUC-Ggo-045526	Gorilla gorilla	83.81	0.00e+00	785.00
IUUC-Hsa-045971	Homo sapiens	86.73	0.00e+00	1171.00
IUUC-Hvu-047695	Hordeum vulgare	49.41	6.00e-88	317.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	87.99	0.00e+00	1186.00
IUUC-Kpa-049402	Komagataella pastoris	43.67	3.00e-97	349.00
IUUC-Lch-049526	Latimeria chalumnae	87.13	0.00e+00	1060.00
IUUC-Lpe-051560	Leersia perrieri	44.41	7.00e-90	324.00
IUUC-Loc-052882	Lepisosteus oculatus	82.98	0.00e+00	1154.00
IUUC-Lma-053212	Leptosphaeria maculans	30.94	8.00e-80	291.00
IUUC-Laf-053859	Loxodonta africana	87.85	0.00e+00	1197.00
IUUC-Mcc-054957	Macaca mulatta	94.51	0.00e+00	958.00
IUUC-Meu-056766	Macropus eugenii	93.92	0.00e+00	654.00
IUUC-Mor-057024	Magnaporthe oryzae	28.20	4.00e-67	249.00
IUUC-Mpo-057520	Magnaporthe poae	29.57	9.00e-72	264.00
IUUC-Mtr-058754	Medicago truncatula	38.07	9.00e-121	427.00
IUUC-Mla-058881	Melampsora laricipopulina	39.11	2.00e-81	296.00
IUUC-Mga-059776	Meleagris gallopavo	99.67	0.00e+00	1236.00
IUUC-Mvi-060208	Microbotryum violaceum	42.53	2.00e-84	306.00
IUUC-Mmr-061783	Microcebus murinus	94.51	0.00e+00	958.00
IUUC-Mdo-062856	Monodelphis domestica	94.47	0.00e+00	1170.00
IUUC-Mmu-064218	Mus musculus	84.82	0.00e+00	1182.00
IUUC-Mac-064886	Musa acuminata	52.29	3.00e-72	266.00
IUUC-Mpu-065735	Mustela putorius furo	87.99	0.00e+00	1196.00
IUUC-Mlu-067544	Myotis lucifugus	94.47	0.00e+00	1165.00
IUUC-Nfi-068502	Neosartorya fischeri	37.44	5.00e-79	288.00
IUUC-Ncr-068891	Neurospora crassa	30.51	6.00e-76	278.00
IUUC-Nle-069389	Nomascus leucogenys	87.43	0.00e+00	1182.00
IUUC-Opr-071042	Ochotona princeps	83.06	0.00e+00	647.00
IUUC-Ont-071455	Oreochromis niloticus	79.69	0.00e+00	1087.00
IUUC-Oan-073181	Ornithorhynchus anatinus	94.15	0.00e+00	1164.00
IUUC-Ocu-073758	Oryctolagus cuniculus	93.66	0.00e+00	1176.00
IUUC-Oba-075739	Oryza barthii	44.35	3.00e-81	295.00
IUUC-Obr-076111	Oryza brachyantha	38.56	1.00e-112	400.00
IUUC-Ogl-077914	Oryza glaberrima	43.81	1.00e-84	307.00
IUUC-Ogu-078057	Oryza glumaepatula	41.94	3.00e-72	265.00
IUUC-Oin-079473	Oryza indica	45.62	2.00e-87	316.00
IUUC-Olo-080645	Oryza longistaminata	52.47	6.00e-70	258.00
IUUC-Ome-081831	Oryza meridionalis	52.38	1.00e-70	260.00
IUUC-Oni-082441	Oryza nivara	42.90	2.00e-72	266.00
IUUC-Opu-083325	Oryza punctata	35.86	2.00e-92	333.00
IUUC-Oru-085131	Oryza rufipogon	42.90	3.00e-72	266.00
IUUC-Osa-086189	Oryza sativa	45.62	2.00e-87	316.00
IUUC-Ola-086574	Oryzias latipes	80.28	0.00e+00	1120.00
IUUC-Olu-087616	Ostreococcus lucimarinus	38.96	7.00e-83	301.00
IUUC-Oga-088827	Otolemur garnettii	94.58	0.00e+00	1164.00
IUUC-Oar-089648	Ovis aries	87.71	0.00e+00	1197.00
IUUC-Ptr-091195	Pan troglodytes	87.15	0.00e+00	1191.00
IUUC-Pan-091978	Papio anubis	87.15	0.00e+00	1179.00
IUUC-Psi-093598	Pelodiscus sinensis	96.57	0.00e+00	1087.00
IUUC-Pno-094823	Phaeosphaeria nodorum	29.91	4.00e-82	298.00
IUUC-Ppa-095455	Physcomitrella patens	38.76	1.00e-113	404.00
IUUC-Pfo-097120	Poecilia formosa	79.97	0.00e+00	1077.00
IUUC-Pab-098771	Pongo abelii	87.43	0.00e+00	1181.00
IUUC-Pop-099542	Populus trichocarpa	37.40	5.00e-115	408.00
IUUC-Pca-100804	Procavia capensis	84.44	0.00e+00	897.00
IUUC-Ppe-101686	Prunus persica	37.54	1.00e-110	393.00
IUUC-Pva-102414	Pteropus vampyrus	83.52	0.00e+00	1106.00
IUUC-Pgr-103603	Puccinia graminis	37.65	1.00e-74	274.00
IUUC-Ptt-103995	Puccinia triticina	39.36	2.00e-69	257.00
IUUC-Pte-104359	Pyrenophora teres	30.62	3.00e-82	299.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	29.95	3.00e-83	302.00
IUUC-Rno-105064	Rattus norvegicus	86.87	0.00e+00	1183.00
IUUC-Sce-106186	Saccharomyces cerevisiae	42.96	1.00e-91	330.00
IUUC-Sha-106582	Sarcophilus harrisii	94.31	0.00e+00	1162.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	37.92	5.00e-112	398.00
IUUC-Spo-108142	Schizosaccharomyces pombe	36.95	3.00e-110	392.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	27.34	4.00e-77	282.00
IUUC-Smo-109097	Selaginella moellendorffii	37.89	1.00e-109	390.00
IUUC-Sit-109804	Setaria italica	38.33	4.00e-108	385.00
IUUC-Sly-111693	Solanum lycopersicum	36.78	7.00e-109	387.00
IUUC-Sar-113412	Sorex araneus	93.16	0.00e+00	773.00
IUUC-Sbi-114849	Sorghum bicolor	37.44	6.00e-106	378.00
IUUC-Sre-114945	Sporisorium reilianum	35.79	3.00e-80	293.00
IUUC-Ssc-115582	Sus scrofa	74.51	0.00e+00	884.00
IUUC-Tgu-116899	Taeniopygia guttata	99.00	0.00e+00	1185.00
IUUC-Tru-118011	Takifugu rubripes	79.21	0.00e+00	1091.00
IUUC-Tni-120598	Tetraodon nigroviridis	78.88	0.00e+00	1077.00
IUUC-Tca-121247	Theobroma cacao	44.50	7.00e-94	338.00
IUUC-Tre-121949	Trichoderma reesei	35.64	5.00e-63	235.00
IUUC-Tvi-122626	Trichoderma virens	32.15	4.00e-64	239.00
IUUC-Tae-123335	Triticum aestivum	50.00	2.00e-89	323.00
IUUC-Tur-126005	Triticum urartu	45.93	2.00e-83	303.00
IUUC-Tme-126904	Tuber melanosporum	43.03	4.00e-93	335.00
IUUC-Tbe-127254	Tupaia belangeri	82.39	0.00e+00	1107.00
IUUC-Ttr-128544	Tursiops truncatus	86.87	0.00e+00	1181.00
IUUC-Uma-129379	Ustilago maydis	34.73	4.00e-79	289.00
IUUC-Vda-129761	Verticillium dahliae	38.57	1.00e-56	214.00
IUUC-Vpa-130485	Vicugna pacos	87.15	0.00e+00	1185.00
IUUC-Vvi-131171	Vitis vinifera	37.83	7.00e-116	410.00
IUUC-Xtr-132762	Xenopus tropicalis	73.78	0.00e+00	976.00
IUUC-Xma-133583	Xiphophorus maculatus	78.90	0.00e+00	1074.00
IUUC-Yli-134446	Yarrowia lipolytica	37.66	2.00e-117	416.00
IUUC-Zma-135722	Zea mays	35.82	1.00e-102	367.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence