iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017874

Ensembl Protein ID

Bra010844.1-P

UniProt Accession

M4D2Z1; M4D2Z1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra010844	Bra010844.1	Bra010844.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-28	98.2	190	224
UBD/Beta-Prp	1.70e-40	140.1	161	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           gH  ++ ++++   +d+ l+++s D+tikvWD+r+
   Q: 190  GHDFEILSCDWnkyDDCVLATSSVDKTIKVWDVRS 224
           5666899******77799**************986 PP

UBD/Beta-Prp

   S: 63   dgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGs 156
           +g++++++s D t+++wd++ +  ++++ gh++++ls+++++++  +l++ s d+ti+vwd++++    ++l+gh  +v+ v+++p   +l++s+s
   Q: 161  HGDVFASASGDCTLRIWDVREPGSTMIIPGHDFEILSCDWNKYDdCVLATSSVDKTIKVWDVRSYRAPLAVLNGHGYAVRKVKFSPHRrSLIASCS 256
           5789**************************************77478888899***********998888************************** PP
   S: 157  lDrtvrlWdlk 167
           +D  v lWd  
   Q: 257  YDMSVCLWDYM 267
           *********83 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MPVFKAPFNG YSVKFSPFYE SRLAVATAQN FGILGNGKIH VLELSPGPPG VTESVSFDTA 60
DAVYDVSWSE SHDSVLVAAL GDGSVKIYDT SLPPPSNPIR SFQEHAREVH SVDYNPTRRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGTGT TCAAGGCGCC GTTCAACGGC TACTCAGTGA AATTCAGCCC CTTCTACGAG 60
TCCCGCCTCG CCGTCGCCAC CGCTCAGAAC TTCGGAATCC TCGGAAACGG CAAGATCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001966	Ailuropoda melanoleuca	43.52	2.00e-72	265.00
IUUC-Aca-004489	Anolis carolinensis	45.60	1.00e-75	276.00
IUUC-Bta-013366	Bos taurus	41.86	4.00e-71	261.00
IUUC-Bol-015677	Brassica oleracea	99.05	0.00e+00	650.00
IUUC-Cja-019975	Callithrix jacchus	43.85	7.00e-73	266.00
IUUC-Csa-024220	Chlorocebus sabaeus	43.12	1.00e-63	236.00
IUUC-Cin-025606	Ciona intestinalis	35.60	4.00e-28	117.00
IUUC-Ete-032339	Echinops telfairi	42.19	9.00e-72	263.00
IUUC-Fca-036310	Felis catus	43.70	3.00e-63	234.00
IUUC-Gmo-038852	Gadus morhua	37.54	2.00e-48	185.00
IUUC-Hsa-046391	Homo sapiens	43.85	7.00e-74	270.00
IUUC-Lch-050018	Latimeria chalumnae	41.84	3.00e-24	103.00
IUUC-Laf-053781	Loxodonta africana	42.52	9.00e-72	263.00
IUUC-Mcc-054938	Macaca mulatta	43.52	1.00e-72	266.00
IUUC-Mpu-066229	Mustela putorius furo	42.86	2.00e-72	265.00
IUUC-Nle-070047	Nomascus leucogenys	42.52	1.00e-70	259.00
IUUC-Opr-070256	Ochotona princeps	43.78	2.00e-46	179.00
IUUC-Ont-071850	Oreochromis niloticus	42.58	1.00e-67	249.00
IUUC-Ola-086475	Oryzias latipes	40.65	4.00e-68	251.00
IUUC-Ptr-090607	Pan troglodytes	44.19	2.00e-74	272.00
IUUC-Psi-093958	Pelodiscus sinensis	47.46	3.00e-70	258.00
IUUC-Pma-094611	Petromyzon marinus	43.73	4.00e-70	257.00
IUUC-Ppa-095970	Physcomitrella patens	65.09	1.00e-130	458.00
IUUC-Pop-100046	Populus trichocarpa	82.97	1.00e-161	561.00
IUUC-Pva-102614	Pteropus vampyrus	42.19	2.00e-71	262.00
IUUC-Sja-107795	Schizosaccharomyces japonicus	35.29	5.00e-53	201.00
IUUC-Sit-110327	Setaria italica	60.31	8.00e-116	409.00
IUUC-Sar-113164	Sorex araneus	41.53	7.00e-68	250.00
IUUC-Sre-114949	Sporisorium reilianum	41.18	5.00e-70	257.00
IUUC-Tru-118094	Takifugu rubripes	34.19	5.00e-49	187.00
IUUC-Tre-122029	Trichoderma reesei	40.06	2.00e-65	242.00
IUUC-Tbe-127809	Tupaia belangeri	32.71	4.00e-36	144.00
IUUC-Xma-133170	Xiphophorus maculatus	41.46	2.00e-43	168.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence