iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000015480.1	ENSONIT00000019497.1	ENSONIP00000019480.1
ENSONIG00000015480.1	ENSONIT00000019498.1	ENSONIP00000019481.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-22	77.9	612	650

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHtd+ +c++  +d t l++G+ D+t++ WDlr+g++l+
   Q: 612  GHTDGASCIDIsHDgTKLWTGGLDNTVRSWDLREGRQLQ 650
           8**********9888*********************998 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MYPQGRHPAP HQPGQPGFKF TVAESCDRIK DEFQFLQAQY HSLKVEYDKL ANEKTEMQRH 60
YVMYYEMSYG LNIEMHKQTE IAKRLNAILA QIMPFLSQEH QQQVAQAVER AKQVTMTELN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCAGAAGG CGCACATTCC TCGGAGGTTC GCGGTTGAAG AATAAAGTAT AGTTTAATCG 60
AGCCCGACCG CACTAAAAAA TTTTCTCCCA GCCTGGCTGG GTGCGTTCTG GAGAGAGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005617--Groucho/TLE_N
IPR009146--Groucho_enhance
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03920--TLE_N
PF00400--WD40

PRINTS

PR01850--GROUCHOFAMLY

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011935	Astyanax mexicanus	94.26	0.00e+00	1352.00
IUUC-Dre-028326	Danio rerio	93.35	0.00e+00	1312.00
IUUC-Gmo-039253	Gadus morhua	86.22	0.00e+00	1214.00
IUUC-Gac-042392	Gasterosteus aculeatus	97.14	0.00e+00	1405.00
IUUC-Mcc-055673	Macaca mulatta	90.38	0.00e+00	1279.00
IUUC-Mmr-060904	Microcebus murinus	90.29	0.00e+00	1275.00
IUUC-Mmu-063702	Mus musculus	90.05	0.00e+00	1248.00
IUUC-Ola-086424	Oryzias latipes	96.25	0.00e+00	1358.00
IUUC-Pfo-096613	Poecilia formosa	96.01	0.00e+00	1365.00
IUUC-Sha-106568	Sarcophilus harrisii	92.13	0.00e+00	1271.00
IUUC-Tru-118424	Takifugu rubripes	94.24	0.00e+00	1319.00
IUUC-Tni-120823	Tetraodon nigroviridis	97.41	0.00e+00	1381.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence