iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121624

Ensembl Protein ID

EOX96661

UniProt Accession

A0A061DXA3; A0A061DXA3_THECC

Genbank Protein ID

EOX96661.1

Protein Name

PHD finger family protein isoform 1

Genbank Nucleotide ID

CM001879

Gene Name

TCM_005865

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_005865	EOX96661	EOX96661
TCM_005865	EOX96662	EOX96662

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.50e-16	60.5	280	337

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedek..slveCekCrewfHpaClkls....veeelpnsekwiCpkCrs 53
           ++C+vC + ++d++   +v+C+ C++w+H +C ++s     + ++ ++ ++ C  Cr 
   Q: 280  NYCPVCLKVYRDSEstPMVCCDVCQRWVHCQCDGISdekyLQFQVDGNLQYKCATCRG 337
           79*********998888999999*************66655555666666******85 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAFHVACPIT CRRICFCSLG FPRNLQSPNS KNGFLQEVIR VEEFLKDPWG VRVSREGTVQ 60
VPVPKVAPVP AGDGGGGGGG SGDAAEEVAS VSAQAKRLAL QRKAAAAMVA AEDYARRVES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCAGAATGT GTATTACTAA TATACATGAA TTTTTGTCTT AAAATATAAT AAAAATGAAA 60
AAAAAAGGTG AGCAAGAGTT TTTTTTTTAC CAAGAAAAGA AAGAGAAATT AAAACCATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR026850--FANCL_C
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF11793--FANCL_C

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001054	Aegilops tauschii	34.16	7.00e-91	327.00
IUUC-Aml-002367	Ailuropoda melanoleuca	32.34	6.00e-27	117.00
IUUC-Atr-003006	Amborella trichopoda	46.68	3.00e-177	614.00
IUUC-Apl-003311	Anas platyrhynchos	32.46	1.00e-26	116.00
IUUC-Aca-004718	Anolis carolinensis	33.17	3.00e-25	111.00
IUUC-Aly-006363	Arabidopsis lyrata	55.19	0.00e+00	850.00
IUUC-Ath-007307	Arabidopsis thaliana	55.30	0.00e+00	858.00
IUUC-Ame-010705	Astyanax mexicanus	31.28	5.00e-24	108.00
IUUC-Bta-013578	Bos taurus	33.84	1.00e-27	119.00
IUUC-Bdi-014882	Brachypodium distachyon	43.87	2.00e-148	518.00
IUUC-Bol-015791	Brassica oleracea	63.19	0.00e+00	681.00
IUUC-Bra-017422	Brassica rapa	62.74	0.00e+00	682.00
IUUC-Cel-018354	Caenorhabditis elegans	28.38	1.00e-17	85.90
IUUC-Cja-019138	Callithrix jacchus	32.57	2.00e-27	119.00
IUUC-Cfa-020020	Canis familiaris	32.34	7.00e-27	117.00
IUUC-Cpo-021459	Cavia porcellus	33.50	1.00e-28	122.00
IUUC-Csa-024216	Chlorocebus sabaeus	33.33	2.00e-27	118.00
IUUC-Cho-024652	Choloepus hoffmanni	35.88	2.00e-23	105.00
IUUC-Cin-025528	Ciona intestinalis	31.82	3.00e-13	68.90
IUUC-Csv-026268	Ciona savignyi	32.23	6.00e-24	106.00
IUUC-Dre-028110	Danio rerio	33.64	2.00e-27	119.00
IUUC-Dno-029583	Dasypus novemcinctus	32.68	6.00e-28	120.00
IUUC-Dor-030903	Dipodomys ordii	33.17	6.00e-27	117.00
IUUC-Dme-031590	Drosophila melanogaster	29.52	5.00e-19	89.70
IUUC-Ete-032834	Echinops telfairi	32.99	9.00e-29	124.00
IUUC-Eca-034026	Equus caballus	33.84	7.00e-27	116.00
IUUC-Eeu-034687	Erinaceus europaeus	32.84	1.00e-27	119.00
IUUC-Fca-036311	Felis catus	32.34	5.00e-27	117.00
IUUC-Fal-037256	Ficedula albicollis	32.14	6.00e-29	124.00
IUUC-Gmo-038641	Gadus morhua	31.48	1.00e-25	113.00
IUUC-Gga-040828	Gallus gallus	32.99	1.00e-28	123.00
IUUC-Gac-041896	Gasterosteus aculeatus	32.55	1.00e-26	117.00
IUUC-Gma-044032	Glycine max	60.98	0.00e+00	958.00
IUUC-Ggo-044791	Gorilla gorilla	33.33	5.00e-27	117.00
IUUC-Hsa-046988	Homo sapiens	33.33	3.00e-27	118.00
IUUC-Hvu-047762	Hordeum vulgare	53.11	1.00e-115	409.00
IUUC-Itr-048907	Ictidomys tridecemlineatus	33.84	1.00e-27	119.00
IUUC-Lch-050086	Latimeria chalumnae	31.10	6.00e-26	114.00
IUUC-Lpe-051476	Leersia perrieri	42.52	7.00e-138	484.00
IUUC-Loc-052181	Lepisosteus oculatus	33.49	2.00e-29	125.00
IUUC-Laf-053703	Loxodonta africana	33.66	1.00e-27	119.00
IUUC-Mcc-054782	Macaca mulatta	33.33	2.00e-27	118.00
IUUC-Meu-056046	Macropus eugenii	32.32	2.00e-25	112.00
IUUC-Mtr-058482	Medicago truncatula	58.65	0.00e+00	836.00
IUUC-Mga-059541	Meleagris gallopavo	32.46	9.00e-27	117.00
IUUC-Mvi-060531	Microbotryum violaceum	33.96	2.00e-12	68.20
IUUC-Mmr-061316	Microcebus murinus	33.84	1.00e-27	119.00
IUUC-Mdo-062648	Monodelphis domestica	31.68	9.00e-26	113.00
IUUC-Mmu-063579	Mus musculus	33.66	1.00e-27	119.00
IUUC-Mac-064935	Musa acuminata	49.15	0.00e+00	733.00
IUUC-Mpu-066710	Mustela putorius furo	33.33	2.00e-27	118.00
IUUC-Mlu-067559	Myotis lucifugus	32.84	2.00e-27	119.00
IUUC-Nle-070085	Nomascus leucogenys	33.17	5.00e-27	117.00
IUUC-Opr-071148	Ochotona princeps	34.34	5.00e-29	124.00
IUUC-Ont-071626	Oreochromis niloticus	32.82	1.00e-25	112.00
IUUC-Oan-072945	Ornithorhynchus anatinus	32.46	2.00e-25	113.00
IUUC-Ocu-074475	Oryctolagus cuniculus	33.84	8.00e-28	119.00
IUUC-Oba-075328	Oryza barthii	41.19	1.00e-121	430.00
IUUC-Obr-076458	Oryza brachyantha	44.38	3.00e-146	511.00
IUUC-Ogl-077851	Oryza glaberrima	43.61	2.00e-153	535.00
IUUC-Ogu-078706	Oryza glumaepatula	43.79	9.00e-147	513.00
IUUC-Oin-079802	Oryza indica	65.12	2.00e-110	392.00
IUUC-Olo-080932	Oryza longistaminata	43.93	2.00e-146	512.00
IUUC-Ome-081954	Oryza meridionalis	35.71	2.00e-98	352.00
IUUC-Oni-082043	Oryza nivara	43.93	2.00e-146	512.00
IUUC-Opu-083679	Oryza punctata	43.90	2.00e-145	508.00
IUUC-Oru-084257	Oryza rufipogon	42.91	4.00e-147	514.00
IUUC-Osa-085421	Oryza sativa	43.75	2.00e-146	512.00
IUUC-Ola-086609	Oryzias latipes	32.82	2.00e-26	115.00
IUUC-Oga-088140	Otolemur garnettii	33.33	3.00e-27	118.00
IUUC-Oar-089447	Ovis aries	33.84	1.00e-27	119.00
IUUC-Ptr-090902	Pan troglodytes	33.33	2.00e-27	118.00
IUUC-Pan-091930	Papio anubis	33.33	2.00e-27	118.00
IUUC-Psi-094059	Pelodiscus sinensis	32.99	9.00e-29	123.00
IUUC-Pma-094252	Petromyzon marinus	31.28	2.00e-20	95.10
IUUC-Ppa-095221	Physcomitrella patens	58.89	7.00e-99	353.00
IUUC-Pfo-096884	Poecilia formosa	32.31	1.00e-24	110.00
IUUC-Pab-098262	Pongo abelii	32.99	1.00e-28	123.00
IUUC-Pop-099585	Populus trichocarpa	62.23	0.00e+00	950.00
IUUC-Pca-100358	Procavia capensis	32.99	1.00e-28	123.00
IUUC-Ppe-101920	Prunus persica	61.00	0.00e+00	930.00
IUUC-Pva-102634	Pteropus vampyrus	31.71	2.00e-27	118.00
IUUC-Pgr-103522	Puccinia graminis	30.30	1.00e-08	55.10
IUUC-Rno-105870	Rattus norvegicus	33.66	6.00e-28	120.00
IUUC-Sha-107174	Sarcophilus harrisii	32.99	7.00e-29	124.00
IUUC-Smo-109624	Selaginella moellendorffii	54.51	1.00e-89	323.00
IUUC-Sit-110552	Setaria italica	44.40	7.00e-159	553.00
IUUC-Sly-111109	Solanum lycopersicum	56.38	0.00e+00	820.00
IUUC-Stu-112041	Solanum tuberosum	33.96	6.00e-09	55.10
IUUC-Sar-113183	Sorex araneus	28.37	5.00e-17	85.10
IUUC-Sre-115066	Sporisorium reilianum	28.91	3.00e-13	70.50
IUUC-Ssc-115509	Sus scrofa	33.33	2.00e-27	119.00
IUUC-Tgu-116677	Taeniopygia guttata	32.46	1.00e-26	117.00
IUUC-Tru-118413	Takifugu rubripes	34.36	3.00e-27	118.00
IUUC-Tsy-118932	Tarsius syrichta	28.80	3.00e-17	85.90
IUUC-Tni-119794	Tetraodon nigroviridis	31.06	2.00e-27	118.00
IUUC-Tae-124647	Triticum aestivum	47.38	2.00e-118	418.00
IUUC-Tbe-127825	Tupaia belangeri	33.33	4.00e-27	117.00
IUUC-Ttr-128754	Tursiops truncatus	32.18	9.00e-27	116.00
IUUC-Uma-129445	Ustilago maydis	40.48	1.00e-13	72.00
IUUC-Vpa-130660	Vicugna pacos	33.52	3.00e-28	121.00
IUUC-Vvi-131236	Vitis vinifera	67.60	0.00e+00	854.00
IUUC-Xtr-132869	Xenopus tropicalis	32.14	5.00e-29	124.00
IUUC-Xma-133751	Xiphophorus maculatus	32.09	2.00e-23	106.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence