iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ncr-068896

Ensembl Protein ID

EAA29212

UniProt Accession

Q7S1H9; CMR1_NEUCR

Genbank Protein ID

EAA29212.1

Protein Name

DNA damage-binding protein cmr1

Genbank Nucleotide ID

CM002242

Gene Name

NCU09302; NCU11420

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NCU09302	EAA29212	EAA29212

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-14	52.8	349	367

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 14   tllvsGsdDgtikvWDlrt 32
            l++++s D t+k+WDlr+
   Q: 349  YLVATASLDRTLKIWDLRK 367
           56799***********985 PP

Organism

Neurospora crassa

Functional Description
(View)

DNA-binding protein that binds to both single- and double-stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.

Protein Sequence
(Fasta)

MPPRKKETVM SEFERKRLEN IAYNNAILSG ISTTADKIIP KPAPPKPKRA STPRVKREPV 60
KKEAARPTRQ SSRLAGLEAD SAVLKRKLDV EAEEEAAKAK AKRMRVSGDL NLGDITVEGR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTCTCGTG CATCGACGCG ACCCGTCGGG TGGCGCGCCT TTGAGATTTT AGTTCCATTG 60
ATTTTCCATA TCGATTGCGA CCATCTGCTG CATTAACCAC ACTCGCGTTG CTTCCTGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0227--DNA damage
KW-0238--DNA-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR033052--Cmr1/WDR76
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000790--C:nuclear chromatin
GO:0034399--C:nuclear periphery
GO:0003677--F:DNA binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:2000001--P:regulation of DNA damage checkpoint

KEGG

ncr:NCU09302

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	23.31	2.00e-18	85.50
IUUC-Aml-002203	Ailuropoda melanoleuca	23.47	6.00e-12	63.50
IUUC-Atr-003079	Amborella trichopoda	26.61	4.00e-22	97.40
IUUC-Apl-003441	Anas platyrhynchos	26.78	8.00e-27	112.00
IUUC-Aca-004241	Anolis carolinensis	28.45	2.00e-34	138.00
IUUC-Aly-005444	Arabidopsis lyrata	27.67	2.00e-27	115.00
IUUC-Ath-007550	Arabidopsis thaliana	27.17	1.00e-25	108.00
IUUC-Ago-007715	Ashbya gossypii	35.60	4.00e-64	237.00
IUUC-Acl-008370	Aspergillus clavatus	50.19	9.00e-132	461.00
IUUC-Afl-008586	Aspergillus flavus	50.28	8.00e-130	455.00
IUUC-Afu-008907	Aspergillus fumigatus	50.47	2.00e-128	450.00
IUUC-Ani-009415	Aspergillus nidulans	50.19	3.00e-129	453.00
IUUC-Ang-009597	Aspergillus niger	39.47	1.00e-63	235.00
IUUC-Aor-010197	Aspergillus oryzae	50.47	2.00e-130	457.00
IUUC-Ate-010280	Aspergillus terreus	50.09	4.00e-130	456.00
IUUC-Ame-010817	Astyanax mexicanus	22.46	2.00e-09	55.10
IUUC-Bgr-012236	Blumeria graminis	57.86	1.00e-156	544.00
IUUC-Bta-013059	Bos taurus	25.67	4.00e-29	121.00
IUUC-Bci-013796	Botrytis cinerea	64.14	3.00e-176	609.00
IUUC-Bdi-015040	Brachypodium distachyon	27.89	8.00e-22	96.30
IUUC-Bol-015202	Brassica oleracea	26.87	3.00e-21	94.70
IUUC-Bra-018032	Brassica rapa	28.53	5.00e-24	103.00
IUUC-Cja-019043	Callithrix jacchus	27.15	6.00e-31	127.00
IUUC-Cfa-021103	Canis familiaris	26.39	2.00e-28	118.00
IUUC-Cpo-021508	Cavia porcellus	27.17	4.00e-29	121.00
IUUC-Cre-022967	Chlamydomonas reinhardtii	21.69	2.00e-11	62.00
IUUC-Csa-023555	Chlorocebus sabaeus	28.23	4.00e-30	124.00
IUUC-Cin-025651	Ciona intestinalis	26.59	1.00e-28	119.00
IUUC-Cgl-026604	Colletotrichum gloeosporioides	60.53	3.00e-160	556.00
IUUC-Cne-027093	Cryptococcus neoformans	27.74	4.00e-24	104.00
IUUC-Cme-027238	Cyanidioschyzon merolae	26.60	5.00e-26	110.00
IUUC-Dre-027441	Danio rerio	30.64	6.00e-32	130.00
IUUC-Dno-029575	Dasypus novemcinctus	27.01	4.00e-30	124.00
IUUC-Dor-030554	Dipodomys ordii	27.03	3.00e-31	127.00
IUUC-Dse-031299	Dothistroma septosporum	52.04	8.00e-144	501.00
IUUC-Ete-032716	Echinops telfairi	24.47	1.00e-13	70.10
IUUC-Eca-034027	Equus caballus	29.50	3.00e-18	84.70
IUUC-Eeu-035234	Erinaceus europaeus	24.70	1.00e-09	56.20
IUUC-Fca-035892	Felis catus	25.19	4.00e-27	114.00
IUUC-Fal-036986	Ficedula albicollis	26.17	4.00e-23	100.00
IUUC-Fox-037750	Fusarium oxysporum	66.41	0.00e+00	642.00
IUUC-Fso-038198	Fusarium solani	66.92	1.00e-169	587.00
IUUC-Gmo-039683	Gadus morhua	23.78	1.00e-11	62.40
IUUC-Gga-040479	Gallus gallus	26.65	3.00e-20	91.30
IUUC-Gac-042043	Gasterosteus aculeatus	25.44	9.00e-19	86.30
IUUC-Gma-042915	Glycine max	25.62	1.00e-29	122.00
IUUC-Ggo-045290	Gorilla gorilla	26.61	2.00e-30	125.00
IUUC-Hsa-047021	Homo sapiens	27.15	1.00e-30	125.00
IUUC-Hvu-047193	Hordeum vulgare	27.67	6.00e-24	103.00
IUUC-Itr-047914	Ictidomys tridecemlineatus	26.61	1.00e-30	125.00
IUUC-Kpa-049275	Komagataella pastoris	33.88	9.00e-66	242.00
IUUC-Lch-049718	Latimeria chalumnae	28.61	4.00e-34	137.00
IUUC-Lpe-051708	Leersia perrieri	29.31	2.00e-20	91.70
IUUC-Loc-052565	Lepisosteus oculatus	24.48	7.00e-30	123.00
IUUC-Lma-053276	Leptosphaeria maculans	54.11	1.00e-149	521.00
IUUC-Laf-053970	Loxodonta africana	28.42	9.00e-34	136.00
IUUC-Mcc-054740	Macaca mulatta	27.96	4.00e-30	124.00
IUUC-Meu-056151	Macropus eugenii	26.96	1.00e-10	58.20
IUUC-Mtr-058451	Medicago truncatula	25.61	4.00e-32	130.00
IUUC-Mla-059117	Melampsora laricipopulina	27.76	1.00e-44	172.00
IUUC-Mga-059328	Meleagris gallopavo	26.09	8.00e-23	99.80
IUUC-Mvi-060555	Microbotryum violaceum	31.81	9.00e-37	146.00
IUUC-Mmr-061520	Microcebus murinus	25.62	3.00e-33	134.00
IUUC-Mdo-062812	Monodelphis domestica	25.67	1.00e-30	126.00
IUUC-Mmu-064011	Mus musculus	26.23	3.00e-27	115.00
IUUC-Mac-065598	Musa acuminata	21.55	9.00e-13	66.60
IUUC-Mpu-066486	Mustela putorius furo	26.38	3.00e-27	114.00
IUUC-Mlu-067721	Myotis lucifugus	26.60	1.00e-19	89.70
IUUC-Nfi-068314	Neosartorya fischeri	51.42	5.00e-129	452.00
IUUC-Nle-069369	Nomascus leucogenys	27.35	3.00e-30	125.00
IUUC-Opr-070975	Ochotona princeps	25.96	1.00e-28	119.00
IUUC-Ont-072528	Oreochromis niloticus	24.86	2.00e-21	95.10
IUUC-Oan-072955	Ornithorhynchus anatinus	23.62	4.00e-19	87.40
IUUC-Ocu-074561	Oryctolagus cuniculus	26.52	4.00e-29	121.00
IUUC-Oba-074982	Oryza barthii	27.37	1.00e-22	99.80
IUUC-Obr-076551	Oryza brachyantha	29.74	3.00e-19	86.70
IUUC-Ogl-077685	Oryza glaberrima	28.74	2.00e-24	105.00
IUUC-Ogu-078331	Oryza glumaepatula	28.74	2.00e-24	104.00
IUUC-Oin-079507	Oryza indica	27.75	6.00e-23	100.00
IUUC-Olo-080604	Oryza longistaminata	30.07	2.00e-20	92.00
IUUC-Ome-081816	Oryza meridionalis	28.65	7.00e-22	96.70
IUUC-Oni-082051	Oryza nivara	27.95	2.00e-24	104.00
IUUC-Opu-083372	Oryza punctata	28.45	3.00e-23	101.00
IUUC-Oru-084578	Oryza rufipogon	28.74	2.00e-24	104.00
IUUC-Osa-086177	Oryza sativa	28.74	2.00e-24	104.00
IUUC-Ola-087208	Oryzias latipes	25.85	2.00e-21	95.50
IUUC-Olu-087680	Ostreococcus lucimarinus	26.88	8.00e-22	96.70
IUUC-Oga-088104	Otolemur garnettii	27.87	4.00e-34	137.00
IUUC-Oar-090157	Ovis aries	27.13	6.00e-29	120.00
IUUC-Ptr-091615	Pan troglodytes	26.88	2.00e-30	125.00
IUUC-Pan-092212	Papio anubis	27.96	5.00e-30	124.00
IUUC-Psi-092950	Pelodiscus sinensis	26.38	2.00e-30	125.00
IUUC-Pma-094625	Petromyzon marinus	26.76	4.00e-11	60.10
IUUC-Pno-094824	Phaeosphaeria nodorum	55.83	6.00e-159	551.00
IUUC-Ppa-095414	Physcomitrella patens	23.29	2.00e-17	82.40
IUUC-Pfo-096922	Poecilia formosa	27.49	7.00e-35	140.00
IUUC-Pab-097591	Pongo abelii	27.15	6.00e-31	127.00
IUUC-Pop-099337	Populus trichocarpa	27.87	1.00e-27	115.00
IUUC-Pca-101025	Procavia capensis	27.01	2.00e-30	125.00
IUUC-Ppe-101256	Prunus persica	27.22	4.00e-18	84.30
IUUC-Pva-102453	Pteropus vampyrus	28.72	1.00e-32	132.00
IUUC-Pgr-103436	Puccinia graminis	30.31	2.00e-45	175.00
IUUC-Ptt-103899	Puccinia triticina	34.12	2.00e-36	145.00
IUUC-Pte-104258	Pyrenophora teres	53.86	3.00e-148	516.00
IUUC-Pyt-104625	Pyrenophora triticirepentis	53.99	1.00e-149	521.00
IUUC-Rno-104843	Rattus norvegicus	26.09	5.00e-25	107.00
IUUC-Sce-106189	Saccharomyces cerevisiae	35.93	4.00e-51	193.00
IUUC-Sha-106672	Sarcophilus harrisii	25.88	1.00e-28	119.00
IUUC-Smo-109176	Selaginella moellendorffii	27.48	8.00e-26	108.00
IUUC-Sit-109704	Setaria italica	29.06	8.00e-29	119.00
IUUC-Sly-111853	Solanum lycopersicum	27.46	2.00e-24	104.00
IUUC-Stu-112482	Solanum tuberosum	27.75	3.00e-24	104.00
IUUC-Sar-113272	Sorex araneus	23.55	2.00e-12	64.70
IUUC-Sbi-114517	Sorghum bicolor	29.63	5.00e-22	97.40
IUUC-Sre-114960	Sporisorium reilianum	30.84	2.00e-29	122.00
IUUC-Ssc-115568	Sus scrofa	27.32	1.00e-29	122.00
IUUC-Tgu-117276	Taeniopygia guttata	26.07	3.00e-19	87.80
IUUC-Tru-118698	Takifugu rubripes	23.11	4.00e-07	47.40
IUUC-Tsy-119027	Tarsius syrichta	24.77	2.00e-11	62.00
IUUC-Tni-120358	Tetraodon nigroviridis	26.10	3.00e-30	124.00
IUUC-Tca-121273	Theobroma cacao	26.59	3.00e-23	101.00
IUUC-Tre-121932	Trichoderma reesei	67.12	0.00e+00	629.00
IUUC-Tvi-122567	Trichoderma virens	68.08	0.00e+00	671.00
IUUC-Tae-123506	Triticum aestivum	27.09	8.00e-22	96.30
IUUC-Tur-126724	Triticum urartu	23.60	6.00e-19	87.00
IUUC-Tme-126958	Tuber melanosporum	42.62	4.00e-88	316.00
IUUC-Tbe-127425	Tupaia belangeri	29.14	2.00e-31	129.00
IUUC-Ttr-129123	Tursiops truncatus	27.03	2.00e-26	112.00
IUUC-Uma-129495	Ustilago maydis	31.20	2.00e-28	119.00
IUUC-Vda-129981	Verticillium dahliae	66.09	4.00e-170	589.00
IUUC-Vpa-130437	Vicugna pacos	27.05	2.00e-30	125.00
IUUC-Vvi-131430	Vitis vinifera	25.79	6.00e-23	100.00
IUUC-Xtr-132670	Xenopus tropicalis	25.00	9.00e-31	126.00
IUUC-Xma-133375	Xiphophorus maculatus	25.58	4.00e-30	124.00
IUUC-Yli-134341	Yarrowia lipolytica	33.98	6.00e-72	263.00
IUUC-Zma-135413	Zea mays	27.38	3.00e-27	114.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence