iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-052175

Ensembl Protein ID

ENSLOCP00000020344.1

UniProt Accession

W5NI85; W5NI85_LEPOC

Genbank Protein ID

ENSLOCP00000020344

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01001697

Gene Name

TRIM35 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000016465.1	ENSLOCT00000020378.1	ENSLOCP00000020344.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.10e-07	30.5	16	87
E3 activity/RING/RING	1.90e-06	28.4	20	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIek.wlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +e+ C++  e++ +Pvvl++ +++ ++++ek w  ++ ++cP++r++ + ++   nl+lr+++++++++ns 
   Q: 16   DELTCSVCCEIFMNPVVLKCSHSFCKACLEKtWKLNSSRECPFCRRRSSTDNPPLNLALRNIVESYLKKNSK 87
           7999*************************98466666668************9***************9975 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C++C+e f++ p+vl C H f++ Cl + w     + + +  CP Cr
   Q: 20   CSVCCEIFMN-PVVLKCSHSFCKACLeKTW-----KLNSSRECPFCR 60
           **********.999************9999.....5888999****8 PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

LSLCDKMAER NSELEDELTC SVCCEIFMNP VVLKCSHSFC KACLEKTWKL NSSRECPFCR 60
RRSSTDNPPL NLALRNIVES YLKKNSKSPT EQSEELCMLH GEKPKLFCLN DQVPICVVCQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTATCCCTCT GTGATAAAAT GGCAGAAAGA AATTCTGAGC TGGAGGATGA GCTCACCTGT 60
TCTGTGTGCT GTGAAATCTT CATGAATCCT GTTGTCCTGA AGTGCAGCCA CAGCTTCTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ont-071392	Oreochromis niloticus	48.63	7.00e-116	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence