iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028835

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing 23

Genbank Nucleotide ID

CR854943

Gene Name

trim23

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000069420.5	ENSDART00000127581.2	ENSDARP00000107078.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	87.83	0.00e+00	1045.00	IUUC-Hsa-045801

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Danio rerio

Protein Sequence
(Fasta)

MAAAVGVNKQ ASMESCVRHG RGTAANAVKV LECGVCEDVF SLQGDKVPRL LLCGHTVCHD 60
CLTRLPLHGR AVRCPFDRQV TELGDSGVWG LKKNFALLEL LERLQNGATN QSGMSEDALR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCATTAGAT GGTTCAGTCC GAGGATGGCC GCTGCTGTCG GTGTAAATAA ACAGGCGTCG 60
ATGGAATCGT GTGTGAGACA CGGCCGAGGA ACTGCCGCTA ATGCGGTGAA GGTATGATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0342--GTP-binding
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003649--Bbox_C
IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR024156--Small_GTPase_ARF
IPR006689--Small_GTPase_ARF/SAR
IPR000315--Znf_B-box
IPR013087--Znf_C2H2_type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51417--ARF
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF00025--Arf
PF00643--zf-B_box
PF14634--zf-RING_5

PRINTS

PR00328--SAR1GTPBP

SMART

SM00502--BBC
SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0008270--F:zinc ion binding
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001685	Ailuropoda melanoleuca	88.21	0.00e+00	1026.00
IUUC-Apl-003280	Anas platyrhynchos	90.91	0.00e+00	1036.00
IUUC-Aca-004587	Anolis carolinensis	88.39	0.00e+00	968.00
IUUC-Ame-010760	Astyanax mexicanus	96.37	0.00e+00	1147.00
IUUC-Bta-013139	Bos taurus	86.57	0.00e+00	1011.00
IUUC-Cel-018197	Caenorhabditis elegans	36.10	4.00e-94	338.00
IUUC-Cja-019407	Callithrix jacchus	87.65	0.00e+00	1025.00
IUUC-Cfa-020758	Canis familiaris	88.07	0.00e+00	1018.00
IUUC-Cpo-022050	Cavia porcellus	87.50	0.00e+00	1041.00
IUUC-Csa-023938	Chlorocebus sabaeus	87.83	0.00e+00	1025.00
IUUC-Cho-024793	Choloepus hoffmanni	70.33	0.00e+00	692.00
IUUC-Cin-025424	Ciona intestinalis	57.17	0.00e+00	645.00
IUUC-Csv-025949	Ciona savignyi	56.68	0.00e+00	639.00
IUUC-Dno-029080	Dasypus novemcinctus	80.14	0.00e+00	935.00
IUUC-Dor-031092	Dipodomys ordii	82.75	0.00e+00	969.00
IUUC-Ete-033169	Echinops telfairi	77.08	0.00e+00	863.00
IUUC-Eca-033509	Equus caballus	88.37	0.00e+00	1034.00
IUUC-Eeu-034669	Erinaceus europaeus	94.25	1.00e-126	447.00
IUUC-Fca-035813	Felis catus	88.02	0.00e+00	1028.00
IUUC-Fal-037222	Ficedula albicollis	90.71	0.00e+00	1039.00
IUUC-Gmo-038996	Gadus morhua	92.56	0.00e+00	1108.00
IUUC-Gga-040181	Gallus gallus	87.87	0.00e+00	1049.00
IUUC-Gac-041763	Gasterosteus aculeatus	93.78	0.00e+00	1115.00
IUUC-Ggo-044808	Gorilla gorilla	82.84	0.00e+00	966.00
IUUC-Hsa-045801	Homo sapiens	87.83	0.00e+00	1025.00
IUUC-Itr-048568	Ictidomys tridecemlineatus	88.35	0.00e+00	1027.00
IUUC-Lch-049531	Latimeria chalumnae	90.60	0.00e+00	1068.00
IUUC-Loc-052929	Lepisosteus oculatus	94.82	0.00e+00	1126.00
IUUC-Laf-053593	Loxodonta africana	88.02	0.00e+00	1030.00
IUUC-Mcc-055065	Macaca mulatta	87.83	0.00e+00	1025.00
IUUC-Meu-056372	Macropus eugenii	95.13	2.00e-126	446.00
IUUC-Mga-059665	Meleagris gallopavo	88.71	0.00e+00	900.00
IUUC-Mmr-061643	Microcebus murinus	88.17	0.00e+00	1025.00
IUUC-Mdo-062624	Monodelphis domestica	88.07	0.00e+00	1031.00
IUUC-Mmu-064210	Mus musculus	88.52	0.00e+00	1051.00
IUUC-Mpu-066292	Mustela putorius furo	88.07	0.00e+00	985.00
IUUC-Mlu-066952	Myotis lucifugus	88.70	0.00e+00	1031.00
IUUC-Nle-069002	Nomascus leucogenys	87.83	0.00e+00	1025.00
IUUC-Opr-070405	Ochotona princeps	81.04	0.00e+00	939.00
IUUC-Ont-071487	Oreochromis niloticus	95.12	0.00e+00	1128.00
IUUC-Oan-073274	Ornithorhynchus anatinus	89.88	0.00e+00	926.00
IUUC-Ocu-074788	Oryctolagus cuniculus	88.52	0.00e+00	1029.00
IUUC-Ola-086339	Oryzias latipes	93.29	0.00e+00	1113.00
IUUC-Oga-089037	Otolemur garnettii	87.85	0.00e+00	1029.00
IUUC-Oar-089458	Ovis aries	88.26	0.00e+00	1008.00
IUUC-Pan-092120	Papio anubis	87.22	0.00e+00	1012.00
IUUC-Psi-093157	Pelodiscus sinensis	87.37	0.00e+00	1044.00
IUUC-Pfo-096904	Poecilia formosa	94.77	0.00e+00	1125.00
IUUC-Pab-098358	Pongo abelii	87.83	0.00e+00	1025.00
IUUC-Pva-102674	Pteropus vampyrus	86.93	0.00e+00	1011.00
IUUC-Rno-105352	Rattus norvegicus	88.70	0.00e+00	1050.00
IUUC-Sha-106532	Sarcophilus harrisii	75.41	5.00e-49	186.00
IUUC-Sar-113483	Sorex araneus	82.67	7.00e-131	461.00
IUUC-Ssc-116170	Sus scrofa	88.54	0.00e+00	1031.00
IUUC-Tgu-116968	Taeniopygia guttata	87.28	0.00e+00	1032.00
IUUC-Tru-118246	Takifugu rubripes	94.52	0.00e+00	1107.00
IUUC-Tni-120692	Tetraodon nigroviridis	95.08	0.00e+00	1079.00
IUUC-Ttr-128956	Tursiops truncatus	88.19	0.00e+00	1031.00
IUUC-Vpa-130291	Vicugna pacos	83.33	0.00e+00	980.00
IUUC-Xtr-132331	Xenopus tropicalis	89.25	0.00e+00	898.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence