iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015916

Ensembl Protein ID

Bo9g059400.1

UniProt Accession

A0A0D3E6B6; A0A0D3E6B6_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo9g059400	Bo9g059400.1	Bo9g059400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-30	105.0	482	513
UBD/Beta-Prp	9.20e-44	151.3	354	512

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWD 29
           gH+  v+c+++   +  +l+s+sdD ti++W 
   Q: 482  GHSMTVNCVSWnpRNpLMLASASDDQTIRIWG 513
           79999*******955588*************7 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfs 103
           +++  + +++++pd++ ++t + d+ i++ ++++  l++++   e+++t+++ s dgk+++   + + i++wdl    k+  +++gh +s + ++++
   Q: 354  TRIPKVVDLAVTPDGESMITVFSDKEIRILNLES--LVERVVTEEQAITSLSVSGDGKFFIVNLSSQEIHLWDLAgEWKQPLKFTGHRQSKYVIRSC 448
           55556667899***********************..**************************************9778999******9998888877 PP
   S: 104  p...sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlW 164
               ++++++sGs+d+ + +w++++++ le +lsgh+ +vncv+++p +  +l+s+s+D+t+r+W
   Q: 449  FgglDSSFIASGSEDSQVYIWNVKNKKPLE-VLSGHSMTVNCVSWNPRNpLMLASASDDQTIRIW 512
           777788************************.********************************** PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MENNEVLGSK GLLKKHEFVR ILIQCLYSLG YKNSASCLEQ ESNISCKSSD FEFLEKQVLT 60
GDWDSSLAVL DRVFDDSRDD SRRNTALYLV LKQCLSEYLR RGETSLALSV LQKQAQVFRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAATA ATGAGGTTTT AGGGTCAAAA GGTTTGCTCA AGAAACACGA ATTCGTCAGG 60
ATTCTCATCC AGTGCCTGTA CTCCTTGGGT TACAAGAACT CCGCTTCTTG TCTTGAACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003020	Amborella trichopoda	55.19	7.00e-155	540.00
IUUC-Aly-005958	Arabidopsis lyrata	85.55	0.00e+00	895.00
IUUC-Ath-006873	Arabidopsis thaliana	85.74	0.00e+00	894.00
IUUC-Bdi-014476	Brachypodium distachyon	49.80	1.00e-136	479.00
IUUC-Cfa-020788	Canis familiaris	40.74	3.00e-78	285.00
IUUC-Cho-024572	Choloepus hoffmanni	38.71	5.00e-57	215.00
IUUC-Cin-025474	Ciona intestinalis	41.96	4.00e-54	204.00
IUUC-Dor-030714	Dipodomys ordii	35.03	1.00e-57	216.00
IUUC-Eeu-034468	Erinaceus europaeus	50.41	1.00e-32	134.00
IUUC-Gmo-039395	Gadus morhua	40.51	4.00e-77	281.00
IUUC-Gma-043704	Glycine max	64.80	0.00e+00	659.00
IUUC-Lch-049848	Latimeria chalumnae	37.64	7.00e-70	257.00
IUUC-Mtr-058724	Medicago truncatula	62.79	0.00e+00	682.00
IUUC-Nle-069654	Nomascus leucogenys	40.74	3.00e-78	285.00
IUUC-Ola-086670	Oryzias latipes	36.28	2.00e-82	300.00
IUUC-Ptr-090787	Pan troglodytes	40.74	3.00e-78	285.00
IUUC-Psi-093579	Pelodiscus sinensis	40.97	4.00e-79	288.00
IUUC-Pma-094254	Petromyzon marinus	42.78	9.00e-81	293.00
IUUC-Pop-098968	Populus trichocarpa	73.31	3.00e-155	540.00
IUUC-Pca-100574	Procavia capensis	43.14	2.00e-43	170.00
IUUC-Ppe-101881	Prunus persica	66.08	0.00e+00	707.00
IUUC-Rno-105335	Rattus norvegicus	40.51	2.00e-78	286.00
IUUC-Stu-112587	Solanum tuberosum	59.82	2.00e-153	535.00
IUUC-Sar-113539	Sorex araneus	44.57	7.00e-40	158.00
IUUC-Sre-115051	Sporisorium reilianum	26.76	5.00e-48	186.00
IUUC-Tsy-119284	Tarsius syrichta	36.64	4.00e-61	228.00
IUUC-Tni-119720	Tetraodon nigroviridis	36.33	1.00e-79	290.00
IUUC-Tvi-122376	Trichoderma virens	35.82	8.00e-52	197.00
IUUC-Ttr-129184	Tursiops truncatus	43.77	1.00e-74	273.00
IUUC-Vpa-130400	Vicugna pacos	40.74	3.00e-77	281.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence