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Tag Content
UUCD2 ID IUUC-Gga-040953
UUCD1 version UUC-GaG-00889
Ensembl Protein ID ENSGALP00000042289.1
UniProt Accession R4GJH4; R4GJH4_CHICK
Genbank Protein ID ENSGALP00000042289
Protein Name Ubiquitin carboxyl-terminal hydrolase 47
Genbank Nucleotide ID AADN04000235
Gene Name USP47
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGALG00000005569.5 ENSGALT00000043792.1 ENSGALP00000042289.1
ENSGALG00000005569.5 ENSGALT00000008932.5 ENSGALP00000008918.5
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 2.60e-75 254.1 188 562
ULD/UDP/UBQ/UBQ_Other 4.90e-06 26.7 1242 1270
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP
   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeq 89
           +Gl N+  tCY+NS+LQ+L+++pe+r++l +    +++e++ ++p +++  +lq+lf  l++skk+a++++++++++++ ++e    +q
   Q: 188  VGLVNQAMTCYLNSLLQTLFMTPEFRNALYK---WEFEESE-EDPVTSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSE--AWQQ 270
           6******************************...5555443.5899*********************************9998..9*** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpg 178
           +D+qE++++++d+le++                           k++++ +li++l+qg+lk+ ++clec+ +  r ++ ld++l ++ 
   Q: 271  HDVQELCRVMFDALEQKW--------------------------KQTEQADLINQLYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRP 333
           ******************..........................678999*************************************95 PP
   S: 179  k.eetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfct 266
             ++++  s++++L++f ++e l+g n+y+ce+ckkk++a+k l++ ++P  L+l+LkRf f+ ++++r+k+n++++fp+eLd+s f  
   Q: 334  YgSNQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSIFID 422
           41334678*****************************************************************************9998 PP
   S: 267  speekqke.....................................................kkkYeLiavvvHsGslssGHYvayvkn. 301
            ++ek+ +                                                     +  YeL++v+vHsGs+ +GHY+a++k+ 
   Q: 423  VEDEKSPQtesctdsgaenegschsdqmsndfsnddgvdegiclesnsaaeriakvgseknSLLYELFSVMVHSGSAAGGHYYACIKSf 511
           86666655777778888888888888888888888888888888888888888888888889**************************5 PP
   S: 302  ekgkWllfdDskVtevkeeevleetg................staYvlfYk 336
           ++++W+ f+D++V+++++e+++++ g                ++aY+l+Y+
   Q: 512  SDDQWYSFNDQHVSKITQEDIKKTYGgssgsrgyyssafassTNAYMLIYR 562
           5666*******************888************************8 PP
   

   ULD/UDP/UBQ/UBQ_Other
   S: 12   eltlkvnpsdtVaeLKekiekklgippeq 40
           +++  v +s++V eLKek++++ gip e 
   Q: 1242 SFQEVVLESSSVEELKEKLSELSGIPLEN 1270
           6677799*******************665 PP
   
Organism Gallus gallus
Protein Sequence
(Fasta)
MVPSEENQLV PKEDMFWSCR QSTLAEMKKK FAQVESAAEE PRVLCIIQDT TNSKTVNERV 60
TLNVPASTPL KKLFEDVASK VGYVNGTFDL VWGNGDNVTD MTPIDQNSDK TILDAGFEPG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Gga-040953|DUB,USP;ULD,UBQ_Other|Gallus gallus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCTCTGCCTG CTGCGGGCCC AGCGCCGCGC CACCGGCCAT GGTGCCCAGC GAGGAGAACC 60
AGCTCGTCCC CAAGGAGGTG AGGCGAGGGG GGCACGGGCC GGGCGACGCA CGAAGGGACG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Gga-040953|DUB,USP;ULD,UBQ_Other|Gallus gallus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR001394--Peptidase_C19_UCH
IPR000626--Ubiquitin_dom
IPR018200--USP_CS
IPR028889--USP_dom
PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
Pfam

PF14560--Ubiquitin_2
PF00443--UCH
Gene Ontology

GO:0005737--C:cytoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0006284--P:base-excision repair
GO:0034644--P:cellular response to UV
GO:0035520--P:monoubiquitinated protein deubiquitination
GO:0043154--P:negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0010972--P:negative regulation of G2/M transition of mitotic cell cycle
GO:1902230--P:negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0030307--P:positive regulation of cell growth
GO:0042493--P:response to drug
GO:0006511--P:ubiquitin-dependent protein catabolic process
KEGG gga:423032
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002228 Ailuropoda melanoleuca 87.93 0.00e+00 2326.00
IUUC-Apl-003486 Anas platyrhynchos 96.99 0.00e+00 2533.00
IUUC-Aca-005061 Anolis carolinensis 90.62 0.00e+00 2453.00
IUUC-Ame-011206 Astyanax mexicanus 80.38 0.00e+00 2098.00
IUUC-Bta-012942 Bos taurus 88.49 0.00e+00 2380.00
IUUC-Cel-018600 Caenorhabditis elegans 37.74 5.00e-123 435.00
IUUC-Cja-018950 Callithrix jacchus 90.51 0.00e+00 2217.00
IUUC-Cfa-020299 Canis familiaris 90.30 0.00e+00 2362.00
IUUC-Cpo-021943 Cavia porcellus 89.14 0.00e+00 2359.00
IUUC-Csa-023285 Chlorocebus sabaeus 89.17 0.00e+00 2359.00
IUUC-Cho-025006 Choloepus hoffmanni 82.73 0.00e+00 2048.00
IUUC-Cin-025145 Ciona intestinalis 41.32 0.00e+00 703.00
IUUC-Csv-025839 Ciona savignyi 49.62 4.00e-163 568.00
IUUC-Dre-027959 Danio rerio 81.33 0.00e+00 2063.00
IUUC-Dno-030023 Dasypus novemcinctus 86.85 0.00e+00 2266.00
IUUC-Dor-030994 Dipodomys ordii 87.86 0.00e+00 868.00
IUUC-Dme-031604 Drosophila melanogaster 48.87 5.00e-146 512.00
IUUC-Ete-032596 Echinops telfairi 75.93 0.00e+00 765.00
IUUC-Eca-033913 Equus caballus 89.00 0.00e+00 2384.00
IUUC-Eeu-034518 Erinaceus europaeus 83.06 0.00e+00 1982.00
IUUC-Fca-035997 Felis catus 89.30 0.00e+00 2372.00
IUUC-Fal-037088 Ficedula albicollis 96.29 0.00e+00 2227.00
IUUC-Gmo-038920 Gadus morhua 77.99 0.00e+00 2028.00
IUUC-Gac-042400 Gasterosteus aculeatus 78.14 0.00e+00 2010.00
IUUC-Ggo-044820 Gorilla gorilla 88.34 0.00e+00 2302.00
IUUC-Hsa-046634 Homo sapiens 89.90 0.00e+00 2394.00
IUUC-Lch-050440 Latimeria chalumnae 85.54 0.00e+00 2301.00
IUUC-Loc-051904 Lepisosteus oculatus 84.52 0.00e+00 2252.00
IUUC-Laf-053760 Loxodonta africana 89.32 0.00e+00 2395.00
IUUC-Mcc-054637 Macaca mulatta 90.04 0.00e+00 2400.00
IUUC-Meu-056904 Macropus eugenii 89.90 0.00e+00 1589.00
IUUC-Mga-059556 Meleagris gallopavo 98.17 0.00e+00 2541.00
IUUC-Mmr-061192 Microcebus murinus 89.90 0.00e+00 2397.00
IUUC-Mdo-061929 Monodelphis domestica 90.62 0.00e+00 2418.00
IUUC-Mmu-063726 Mus musculus 88.15 0.00e+00 2374.00
IUUC-Mpu-066014 Mustela putorius furo 90.26 0.00e+00 2351.00
IUUC-Mlu-067232 Myotis lucifugus 89.32 0.00e+00 2359.00
IUUC-Nle-069619 Nomascus leucogenys 88.95 0.00e+00 2357.00
IUUC-Opr-070224 Ochotona princeps 85.50 0.00e+00 1051.00
IUUC-Ont-071384 Oreochromis niloticus 80.10 0.00e+00 2071.00
IUUC-Oan-073208 Ornithorhynchus anatinus 85.29 0.00e+00 2269.00
IUUC-Ocu-074285 Oryctolagus cuniculus 89.53 0.00e+00 2388.00
IUUC-Ola-087051 Oryzias latipes 79.46 0.00e+00 1999.00
IUUC-Oga-088928 Otolemur garnettii 89.51 0.00e+00 2363.00
IUUC-Oar-090215 Ovis aries 88.90 0.00e+00 2387.00
IUUC-Ptr-091035 Pan troglodytes 89.97 0.00e+00 2399.00
IUUC-Pan-092377 Papio anubis 89.51 0.00e+00 2353.00
IUUC-Pfo-096722 Poecilia formosa 79.39 0.00e+00 2048.00
IUUC-Pab-098723 Pongo abelii 89.90 0.00e+00 2396.00
IUUC-Pca-100105 Procavia capensis 85.33 0.00e+00 2175.00
IUUC-Pva-102514 Pteropus vampyrus 89.58 0.00e+00 887.00
IUUC-Rno-105384 Rattus norvegicus 87.94 0.00e+00 2343.00
IUUC-Sha-106982 Sarcophilus harrisii 87.21 0.00e+00 2352.00
IUUC-Sar-113723 Sorex araneus 82.65 0.00e+00 891.00
IUUC-Ssc-115671 Sus scrofa 90.14 0.00e+00 1909.00
IUUC-Tgu-116722 Taeniopygia guttata 94.50 0.00e+00 2461.00
IUUC-Tru-118380 Takifugu rubripes 77.60 0.00e+00 2053.00
IUUC-Tsy-119646 Tarsius syrichta 83.49 0.00e+00 2159.00
IUUC-Tni-120762 Tetraodon nigroviridis 77.74 0.00e+00 2057.00
IUUC-Tbe-127861 Tupaia belangeri 87.98 0.00e+00 2197.00
IUUC-Ttr-129254 Tursiops truncatus 82.48 0.00e+00 1326.00
IUUC-Vpa-130141 Vicugna pacos 89.68 0.00e+00 1100.00
IUUC-Xtr-132700 Xenopus tropicalis 81.17 0.00e+00 2165.00
Created Date 25-Jun-2017

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