iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pma-094452

Ensembl Protein ID

ENSPMAP00000002459.1

UniProt Accession

S4RB78; S4RB78_PETMA

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPMAG00000002146.1	ENSPMAT00000002471.1	ENSPMAP00000002459.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-23	79.8	601	639

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHtd+ +c++  +d t l++G+ D+t++ WDlr+g++l+
   Q: 601  GHTDGASCIDIsHDgTKLWTGGLDNTVRSWDLREGRQLQ 639
           8**********9888*********************998 PP

Organism

Petromyzon marinus

Protein Sequence
(Fasta)

APHQAGQPFK FTVTETCDRI KEEFQFQAQY HSLKLECEKL ASEKTEMQRH YVMYYEMSYG 60
LNIEMHKQTE IVKRLNAICA QVIPFLSQEH QQQVIQAVER AKQVTMSELN AIIGHQQLQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCCCCATC AGGCGGGTCA GCCCTTTAAA TTCACGGTGA CAGAGACGTG CGACCGCATC 60
AAAGAAGAGT TCCAGTTTCT GGCAGGCGCA GTACCACAGG TACGGTCTGA GACCTTGCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR005617--Groucho/TLE_N
IPR009146--Groucho_enhance
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03920--TLE_N
PF00400--WD40

PRINTS

PR01850--GROUCHOFAMLY

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002200	Ailuropoda melanoleuca	78.45	0.00e+00	1062.00
IUUC-Apl-003594	Anas platyrhynchos	78.11	0.00e+00	1028.00
IUUC-Aca-005074	Anolis carolinensis	80.67	0.00e+00	884.00
IUUC-Ame-010724	Astyanax mexicanus	75.54	0.00e+00	1058.00
IUUC-Bta-012646	Bos taurus	79.40	0.00e+00	1105.00
IUUC-Cja-019135	Callithrix jacchus	82.06	0.00e+00	874.00
IUUC-Cfa-020611	Canis familiaris	81.88	0.00e+00	870.00
IUUC-Cpo-021606	Cavia porcellus	79.61	0.00e+00	1080.00
IUUC-Csa-024056	Chlorocebus sabaeus	81.88	0.00e+00	885.00
IUUC-Cho-024590	Choloepus hoffmanni	72.89	0.00e+00	975.00
IUUC-Cin-025767	Ciona intestinalis	59.22	2.00e-175	607.00
IUUC-Csv-026174	Ciona savignyi	57.14	1.00e-162	565.00
IUUC-Dre-028595	Danio rerio	77.43	0.00e+00	1053.00
IUUC-Dno-029011	Dasypus novemcinctus	82.06	0.00e+00	874.00
IUUC-Dor-030533	Dipodomys ordii	76.14	0.00e+00	949.00
IUUC-Ete-032685	Echinops telfairi	75.89	0.00e+00	975.00
IUUC-Eca-033351	Equus caballus	82.06	0.00e+00	873.00
IUUC-Eeu-034666	Erinaceus europaeus	81.35	0.00e+00	874.00
IUUC-Fca-036030	Felis catus	80.58	0.00e+00	1123.00
IUUC-Fal-036696	Ficedula albicollis	79.25	0.00e+00	1015.00
IUUC-Gmo-039000	Gadus morhua	70.29	0.00e+00	920.00
IUUC-Gga-041113	Gallus gallus	79.77	0.00e+00	1090.00
IUUC-Gac-041924	Gasterosteus aculeatus	76.44	0.00e+00	1016.00
IUUC-Ggo-045164	Gorilla gorilla	82.06	0.00e+00	887.00
IUUC-Hsa-047011	Homo sapiens	82.06	0.00e+00	887.00
IUUC-Itr-048974	Ictidomys tridecemlineatus	80.58	0.00e+00	1102.00
IUUC-Lch-050110	Latimeria chalumnae	77.37	0.00e+00	1046.00
IUUC-Loc-052165	Lepisosteus oculatus	78.45	0.00e+00	1066.00
IUUC-Laf-053817	Loxodonta africana	78.02	0.00e+00	1065.00
IUUC-Mcc-055735	Macaca mulatta	77.47	0.00e+00	874.00
IUUC-Meu-056601	Macropus eugenii	78.33	0.00e+00	1070.00
IUUC-Mga-059792	Meleagris gallopavo	71.51	0.00e+00	855.00
IUUC-Mmr-061207	Microcebus murinus	82.89	0.00e+00	875.00
IUUC-Mdo-062956	Monodelphis domestica	80.58	0.00e+00	1102.00
IUUC-Mmu-063576	Mus musculus	80.84	0.00e+00	1091.00
IUUC-Mpu-065819	Mustela putorius furo	82.09	0.00e+00	902.00
IUUC-Mlu-067047	Myotis lucifugus	81.24	0.00e+00	875.00
IUUC-Nle-069684	Nomascus leucogenys	81.88	0.00e+00	885.00
IUUC-Opr-071172	Ochotona princeps	81.88	0.00e+00	873.00
IUUC-Ont-071865	Oreochromis niloticus	76.70	0.00e+00	1048.00
IUUC-Oan-072842	Ornithorhynchus anatinus	78.42	0.00e+00	1079.00
IUUC-Ocu-074592	Oryctolagus cuniculus	79.62	0.00e+00	870.00
IUUC-Ola-086424	Oryzias latipes	78.24	0.00e+00	1055.00
IUUC-Oga-087939	Otolemur garnettii	80.71	0.00e+00	1104.00
IUUC-Oar-089551	Ovis aries	81.39	0.00e+00	864.00
IUUC-Ptr-091207	Pan troglodytes	82.06	0.00e+00	887.00
IUUC-Pan-092288	Papio anubis	78.71	0.00e+00	1068.00
IUUC-Psi-093427	Pelodiscus sinensis	78.96	0.00e+00	1074.00
IUUC-Pfo-096613	Poecilia formosa	78.36	0.00e+00	1060.00
IUUC-Pab-097687	Pongo abelii	82.06	0.00e+00	887.00
IUUC-Pca-100321	Procavia capensis	77.50	0.00e+00	1056.00
IUUC-Pva-102355	Pteropus vampyrus	84.38	0.00e+00	822.00
IUUC-Rno-104864	Rattus norvegicus	78.19	0.00e+00	1055.00
IUUC-Sha-107419	Sarcophilus harrisii	77.68	0.00e+00	1016.00
IUUC-Sar-113585	Sorex araneus	77.88	0.00e+00	642.00
IUUC-Ssc-116408	Sus scrofa	80.13	0.00e+00	1112.00
IUUC-Tgu-117387	Taeniopygia guttata	79.87	0.00e+00	1065.00
IUUC-Tru-118424	Takifugu rubripes	76.26	0.00e+00	1025.00
IUUC-Tsy-119342	Tarsius syrichta	77.53	0.00e+00	786.00
IUUC-Tni-120823	Tetraodon nigroviridis	78.48	0.00e+00	1067.00
IUUC-Tbe-127881	Tupaia belangeri	81.66	0.00e+00	874.00
IUUC-Ttr-128845	Tursiops truncatus	77.76	0.00e+00	1061.00
IUUC-Vpa-130577	Vicugna pacos	64.53	6.00e-129	453.00
IUUC-Xtr-132974	Xenopus tropicalis	79.39	0.00e+00	1056.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence