iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-090810

Ensembl Protein ID

ENSPTRP00000030823.4

UniProt Accession

H2QST7; H2QST7_PANTR

Genbank Protein ID

JAA01424.1; JAA19816.1; JAA31242.1; JAA35895.1

Protein Name

PHD finger protein 1

Genbank Nucleotide ID

AACZ03049385; GABF01002329; GABD01001858; GABE01008844

Gene Name

PHF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000018049.5	ENSPTRT00000033360.4	ENSPTRP00000030823.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.80e-10	39.5	89	140

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedek.slveCekCrewfHpaClklsveeelpnsek.wiCpkCr 52
            C vC++++      lv CekCr+++H++C+ + +  + +++ + w C++C 
   Q: 89   LCCVCRSETVVPGnRLVSCEKCRHAYHQDCHVPRAPAPGEGEGTsWVCRQCV 140
           588***999876459*******************66666655558******7 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MAQPPRLSRS GASSLWDPAS PAPTSGPRPR LWEGQDVLAR WTDGLLYLGT IKKVDSAREV 60
CLVQFEDDSQ FLVLWKDISP AALPGEELLC CVCRSETVVP GNRLVSCEKC RHAYHQDCHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCCTCCCC CCCGCCGCCT CCTCCTCCTG CCGCTGCCGC TGCTTTGGCT GCTGCGTCAT 60
ACGCCCCAGA GCCGCCGGGA CGGAGGGGCT GGGCCTGGGG ACCCCCCGGC CTCCGCCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR025894--Mtf2_C_dom
IPR031202--PHF1
IPR002999--Tudor
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF14061--Mtf2_C
PF00628--PHD

SMART

SM00249--PHD
SM00333--TUDOR

Gene Ontology

GO:0035098--C:ESC/E(Z) complex
GO:0035861--C:site of double-strand break
GO:0008270--F:zinc ion binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0061086--P:negative regulation of histone H3-K27 methylation
GO:0061087--P:positive regulation of histone H3-K27 methylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001720	Ailuropoda melanoleuca	97.71	0.00e+00	939.00
IUUC-Ame-011369	Astyanax mexicanus	47.88	2.00e-126	445.00
IUUC-Bta-012536	Bos taurus	96.83	0.00e+00	894.00
IUUC-Cja-019049	Callithrix jacchus	98.94	0.00e+00	932.00
IUUC-Cfa-021211	Canis familiaris	97.35	0.00e+00	931.00
IUUC-Cpo-021980	Cavia porcellus	94.38	0.00e+00	918.00
IUUC-Csa-023154	Chlorocebus sabaeus	98.94	0.00e+00	957.00
IUUC-Dre-028597	Danio rerio	47.61	9.00e-131	460.00
IUUC-Dor-030431	Dipodomys ordii	95.60	0.00e+00	881.00
IUUC-Ete-032589	Echinops telfairi	89.01	0.00e+00	905.00
IUUC-Eca-034315	Equus caballus	97.71	0.00e+00	963.00
IUUC-Gmo-039382	Gadus morhua	65.59	7.00e-119	419.00
IUUC-Gac-041748	Gasterosteus aculeatus	66.13	7.00e-121	426.00
IUUC-Ggo-044966	Gorilla gorilla	99.65	0.00e+00	956.00
IUUC-Hsa-046188	Homo sapiens	99.29	0.00e+00	922.00
IUUC-Itr-048249	Ictidomys tridecemlineatus	96.30	0.00e+00	924.00
IUUC-Lch-050336	Latimeria chalumnae	52.29	2.00e-149	522.00
IUUC-Laf-053729	Loxodonta africana	92.48	0.00e+00	872.00
IUUC-Mcc-055486	Macaca mulatta	98.94	0.00e+00	957.00
IUUC-Meu-055933	Macropus eugenii	93.73	0.00e+00	683.00
IUUC-Mmr-061114	Microcebus murinus	96.13	0.00e+00	942.00
IUUC-Mdo-062033	Monodelphis domestica	82.95	0.00e+00	794.00
IUUC-Mmu-063482	Mus musculus	91.53	0.00e+00	933.00
IUUC-Mpu-065725	Mustela putorius furo	97.35	0.00e+00	949.00
IUUC-Mlu-067243	Myotis lucifugus	94.53	0.00e+00	926.00
IUUC-Nle-069759	Nomascus leucogenys	99.12	0.00e+00	928.00
IUUC-Ont-071655	Oreochromis niloticus	53.67	2.00e-124	439.00
IUUC-Ocu-073930	Oryctolagus cuniculus	97.71	0.00e+00	924.00
IUUC-Oga-088161	Otolemur garnettii	95.24	0.00e+00	925.00
IUUC-Oar-089582	Ovis aries	96.48	0.00e+00	888.00
IUUC-Pan-091980	Papio anubis	98.94	0.00e+00	957.00
IUUC-Pfo-097260	Poecilia formosa	61.02	5.00e-122	430.00
IUUC-Pab-098556	Pongo abelii	99.29	0.00e+00	933.00
IUUC-Pca-100360	Procavia capensis	96.03	0.00e+00	832.00
IUUC-Pva-102900	Pteropus vampyrus	97.17	0.00e+00	916.00
IUUC-Rno-105536	Rattus norvegicus	92.95	0.00e+00	922.00
IUUC-Sha-107357	Sarcophilus harrisii	85.11	0.00e+00	841.00
IUUC-Ssc-116070	Sus scrofa	95.41	0.00e+00	875.00
IUUC-Tsy-119247	Tarsius syrichta	99.37	0.00e+00	640.00
IUUC-Tbe-127780	Tupaia belangeri	90.65	0.00e+00	848.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence