iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028614

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RAB40B, member RAS oncogene family

Genbank Nucleotide ID

CR385040

Gene Name

rab40b

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000042410.5	ENSDART00000062185.5	ENSDARP00000062184.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	7.10e-15	55.5	182	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 3    klwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
            lw +++++ SLq+LC+++I++c++ + +   dkLPLP +Lk++L+++++
   Q: 182  RLW-RPNKVLSLQDLCCRSIVSCTPVHLV---DKLPLPVALKSHLKSFSM 227
           677.99********************888...***************976 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MNHRSSPAKA YDFLLKFLLV GDSDVGKGEI LASLQDGSSE SPYGYNMGID YKTTTILLDG 60
RRVKLQLWDT SGQGRFCTIF RSYSRGAQGV ILVYDITNRW SFDGIDRWIK EIDEHAPGVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTCTGTT TAGGGAGGCT GATAGACGAG AGGGATCGTG GCTGAGAGCT CAATGGACCA 60
GGTTTGCTCA AACTGTAAAG ATGAGATAAA CATTAGGTGT TCTGTATTAT AATTACCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005768--C:endosome
GO:0005886--C:plasma membrane
GO:0008021--C:synaptic vesicle
GO:0005525--F:GTP binding
GO:0072659--P:protein localization to plasma membrane
GO:0009306--P:protein secretion
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction
GO:0006904--P:vesicle docking involved in exocytosis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003206	Anas platyrhynchos	88.36	4.00e-123	433.00
IUUC-Aca-005004	Anolis carolinensis	91.50	1.00e-136	479.00
IUUC-Ame-011456	Astyanax mexicanus	97.49	3.00e-162	563.00
IUUC-Bta-012683	Bos taurus	79.21	5.00e-133	466.00
IUUC-Cfa-020527	Canis familiaris	82.94	9.00e-105	373.00
IUUC-Cpo-021644	Cavia porcellus	82.84	1.00e-131	462.00
IUUC-Csa-023150	Chlorocebus sabaeus	84.23	6.00e-142	496.00
IUUC-Eca-033492	Equus caballus	84.48	8.00e-119	419.00
IUUC-Fca-035705	Felis catus	83.62	2.00e-116	411.00
IUUC-Gga-040925	Gallus gallus	86.02	2.00e-145	508.00
IUUC-Ggo-045012	Gorilla gorilla	78.85	1.00e-128	452.00
IUUC-Hsa-046747	Homo sapiens	83.87	5.00e-141	493.00
IUUC-Loc-052325	Lepisosteus oculatus	89.64	7.00e-150	523.00
IUUC-Laf-053340	Loxodonta africana	82.80	2.00e-136	478.00
IUUC-Mga-059204	Meleagris gallopavo	86.02	3.00e-145	507.00
IUUC-Mmu-064144	Mus musculus	83.15	7.00e-140	489.00
IUUC-Mpu-066352	Mustela putorius furo	84.48	1.00e-117	415.00
IUUC-Nle-070096	Nomascus leucogenys	83.51	7.00e-140	489.00
IUUC-Opr-070662	Ochotona princeps	79.57	8.00e-133	466.00
IUUC-Ont-072397	Oreochromis niloticus	87.76	4.00e-146	510.00
IUUC-Ocu-074559	Oryctolagus cuniculus	81.72	7.00e-131	459.00
IUUC-Olo-080270	Oryza longistaminata	33.68	2.00e-12	67.40
IUUC-Oga-088133	Otolemur garnettii	82.08	2.00e-138	484.00
IUUC-Oar-089702	Ovis aries	80.09	9.00e-111	392.00
IUUC-Ptr-090544	Pan troglodytes	85.44	4.00e-134	471.00
IUUC-Pan-092812	Papio anubis	84.23	6.00e-142	496.00
IUUC-Psi-093120	Pelodiscus sinensis	88.17	3.00e-149	520.00
IUUC-Pfo-096238	Poecilia formosa	84.88	5.00e-137	480.00
IUUC-Pab-098735	Pongo abelii	84.23	6.00e-142	496.00
IUUC-Rno-105063	Rattus norvegicus	84.59	5.00e-142	496.00
IUUC-Sar-113518	Sorex araneus	78.26	5.00e-116	410.00
IUUC-Ssc-115719	Sus scrofa	79.93	4.00e-129	454.00
IUUC-Tsy-119011	Tarsius syrichta	81.68	9.00e-93	332.00
IUUC-Xtr-132079	Xenopus tropicalis	88.17	4.00e-149	520.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence