iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074600

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02037990

Gene Name

AMBRA1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000016117.3	ENSOCUT00000016119.3	ENSOCUP00000013852.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.20e-08	32.5	93	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           gH    +c+ f ++  +l++sG+ Dg +++WDl+
   Q: 93   GHRRTPWCVTFhPTisGLIASGCLDGEVRIWDLH 126
           6777779*****76779***************97 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MKVVPEKNAV RILWGRERGT RAMGAQRLLQ ELVEDKTRWM KWEGKRVELP DSPRSTFLLA 60
FSPDRTLLAS THVNHNIYIT EVKTGKCVHS LIGHRRTPWC VTFHPTISGL IASGCLDGEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTCCATGA GGACAACTTG TAAGGACCTG AATGGCCTCA TTTTAGTTGC TTCAGCTTGT 60
GGAGCTGTTA CTTGCTCCTT CGTTTCCTGT GCCTGGGGTG ACAGTGGCTA CCAAGCGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005829--C:cytosol
GO:0005739--C:mitochondrion
GO:0045335--C:phagocytic vesicle
GO:0006914--P:autophagy
GO:0008285--P:negative regulation of cell proliferation
GO:0043524--P:negative regulation of neuron apoptotic process
GO:0021915--P:neural tube development
GO:0098779--P:positive regulation of macromitophagy in response to mitochondrial depolarization
GO:0043552--P:positive regulation of phosphatidylinositol 3-kinase activity
GO:2000785--P:regulation of autophagosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001917	Ailuropoda melanoleuca	96.83	0.00e+00	1150.00
IUUC-Atr-002557	Amborella trichopoda	37.74	4.00e-30	126.00
IUUC-Apl-004186	Anas platyrhynchos	86.22	0.00e+00	1277.00
IUUC-Aca-004419	Anolis carolinensis	83.46	0.00e+00	1211.00
IUUC-Aly-006308	Arabidopsis lyrata	37.85	8.00e-29	122.00
IUUC-Ath-007656	Arabidopsis thaliana	36.92	3.00e-28	120.00
IUUC-Ame-011354	Astyanax mexicanus	57.61	0.00e+00	803.00
IUUC-Bta-012455	Bos taurus	95.02	0.00e+00	1421.00
IUUC-Bdi-014580	Brachypodium distachyon	42.33	4.00e-30	126.00
IUUC-Bol-016094	Brassica oleracea	40.22	8.00e-29	122.00
IUUC-Bra-017308	Brassica rapa	40.76	8.00e-30	125.00
IUUC-Cja-019073	Callithrix jacchus	97.80	0.00e+00	1104.00
IUUC-Cfa-020994	Canis familiaris	95.76	0.00e+00	1938.00
IUUC-Cpo-022101	Cavia porcellus	96.11	0.00e+00	1390.00
IUUC-Csa-023273	Chlorocebus sabaeus	98.04	0.00e+00	1966.00
IUUC-Cin-025567	Ciona intestinalis	52.20	3.00e-56	213.00
IUUC-Csv-026005	Ciona savignyi	51.26	5.00e-56	210.00
IUUC-Dre-028282	Danio rerio	56.61	0.00e+00	780.00
IUUC-Dno-029948	Dasypus novemcinctus	93.94	0.00e+00	1386.00
IUUC-Dor-030568	Dipodomys ordii	93.28	6.00e-165	575.00
IUUC-Ete-032864	Echinops telfairi	84.83	3.00e-175	609.00
IUUC-Eca-034392	Equus caballus	97.86	0.00e+00	1966.00
IUUC-Eeu-034440	Erinaceus europaeus	80.68	0.00e+00	630.00
IUUC-Fca-035359	Felis catus	91.75	0.00e+00	1385.00
IUUC-Fal-037483	Ficedula albicollis	83.56	0.00e+00	1291.00
IUUC-Gmo-039343	Gadus morhua	74.09	0.00e+00	719.00
IUUC-Gga-040787	Gallus gallus	80.33	0.00e+00	641.00
IUUC-Gac-041321	Gasterosteus aculeatus	60.91	0.00e+00	1252.00
IUUC-Gma-044022	Glycine max	36.63	2.00e-29	124.00
IUUC-Ggo-044775	Gorilla gorilla	97.29	0.00e+00	1081.00
IUUC-Hsa-045708	Homo sapiens	97.57	0.00e+00	1413.00
IUUC-Hvu-047536	Hordeum vulgare	41.57	1.00e-29	124.00
IUUC-Itr-048376	Ictidomys tridecemlineatus	95.43	8.00e-172	597.00
IUUC-Lch-050255	Latimeria chalumnae	73.12	0.00e+00	999.00
IUUC-Lpe-050684	Leersia perrieri	41.76	2.00e-30	127.00
IUUC-Loc-052881	Lepisosteus oculatus	64.63	0.00e+00	941.00
IUUC-Laf-053342	Loxodonta africana	95.56	0.00e+00	1328.00
IUUC-Mcc-055848	Macaca mulatta	94.05	0.00e+00	1389.00
IUUC-Meu-056320	Macropus eugenii	75.78	2.00e-150	527.00
IUUC-Mtr-058484	Medicago truncatula	38.54	2.00e-29	124.00
IUUC-Mga-059401	Meleagris gallopavo	85.19	0.00e+00	1076.00
IUUC-Mmr-061037	Microcebus murinus	97.33	0.00e+00	1436.00
IUUC-Mdo-062484	Monodelphis domestica	75.24	0.00e+00	1021.00
IUUC-Mmu-064090	Mus musculus	95.99	0.00e+00	1383.00
IUUC-Mac-065675	Musa acuminata	36.20	2.00e-29	124.00
IUUC-Mpu-066165	Mustela putorius furo	95.85	0.00e+00	1937.00
IUUC-Mlu-068038	Myotis lucifugus	95.02	0.00e+00	1393.00
IUUC-Nle-069361	Nomascus leucogenys	97.30	0.00e+00	1294.00
IUUC-Opr-070360	Ochotona princeps	98.44	0.00e+00	716.00
IUUC-Ont-071277	Oreochromis niloticus	60.31	0.00e+00	1125.00
IUUC-Oan-073623	Ornithorhynchus anatinus	84.41	0.00e+00	1499.00
IUUC-Oba-075024	Oryza barthii	34.30	4.00e-32	133.00
IUUC-Obr-076172	Oryza brachyantha	34.30	2.00e-32	134.00
IUUC-Ogl-077411	Oryza glaberrima	34.30	4.00e-32	133.00
IUUC-Ogu-078025	Oryza glumaepatula	34.30	5.00e-32	133.00
IUUC-Oni-082463	Oryza nivara	34.30	3.00e-32	134.00
IUUC-Opu-084041	Oryza punctata	34.30	1.00e-31	132.00
IUUC-Oru-085075	Oryza rufipogon	38.19	1.00e-31	131.00
IUUC-Osa-085781	Oryza sativa	34.30	3.00e-32	133.00
IUUC-Ola-086729	Oryzias latipes	60.97	0.00e+00	871.00
IUUC-Olu-087735	Ostreococcus lucimarinus	40.32	7.00e-24	105.00
IUUC-Oga-089113	Otolemur garnettii	97.08	0.00e+00	1354.00
IUUC-Oar-090171	Ovis aries	94.53	0.00e+00	1380.00
IUUC-Ptr-090970	Pan troglodytes	97.57	0.00e+00	1412.00
IUUC-Pan-092778	Papio anubis	94.84	0.00e+00	1968.00
IUUC-Psi-093571	Pelodiscus sinensis	85.18	0.00e+00	1287.00
IUUC-Pma-094563	Petromyzon marinus	74.17	6.00e-106	376.00
IUUC-Ppa-095832	Physcomitrella patens	37.16	6.00e-31	129.00
IUUC-Pfo-097365	Poecilia formosa	60.54	0.00e+00	836.00
IUUC-Pab-098647	Pongo abelii	98.44	0.00e+00	730.00
IUUC-Pop-099742	Populus trichocarpa	40.32	1.00e-29	124.00
IUUC-Pca-101035	Procavia capensis	98.44	4.00e-153	535.00
IUUC-Ppe-101783	Prunus persica	42.22	2.00e-29	124.00
IUUC-Pva-103187	Pteropus vampyrus	98.54	0.00e+00	701.00
IUUC-Rno-105701	Rattus norvegicus	96.11	0.00e+00	1375.00
IUUC-Sha-107612	Sarcophilus harrisii	89.05	0.00e+00	1296.00
IUUC-Smo-109107	Selaginella moellendorffii	40.23	1.00e-27	117.00
IUUC-Sit-110786	Setaria italica	38.12	1.00e-32	134.00
IUUC-Sly-110859	Solanum lycopersicum	38.10	6.00e-32	132.00
IUUC-Stu-112031	Solanum tuberosum	38.57	5.00e-32	132.00
IUUC-Sar-113242	Sorex araneus	97.66	4.00e-148	519.00
IUUC-Ssc-116094	Sus scrofa	96.97	0.00e+00	1404.00
IUUC-Tru-118308	Takifugu rubripes	52.03	0.00e+00	942.00
IUUC-Tsy-119552	Tarsius syrichta	99.66	2.00e-174	606.00
IUUC-Tca-121616	Theobroma cacao	38.10	1.00e-30	128.00
IUUC-Tae-124768	Triticum aestivum	42.17	4.00e-30	126.00
IUUC-Tur-126480	Triticum urartu	42.17	2.00e-30	127.00
IUUC-Tbe-127902	Tupaia belangeri	92.58	5.00e-142	499.00
IUUC-Ttr-129278	Tursiops truncatus	98.31	0.00e+00	694.00
IUUC-Vpa-130741	Vicugna pacos	90.10	0.00e+00	654.00
IUUC-Vvi-131437	Vitis vinifera	45.45	4.00e-29	123.00
IUUC-Xtr-132247	Xenopus tropicalis	59.30	0.00e+00	772.00
IUUC-Xma-134277	Xiphophorus maculatus	58.96	0.00e+00	876.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence