iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121391

Ensembl Protein ID

EOY24859

UniProt Accession

A0A061GCS6; A0A061GCS6_THECC

Genbank Protein ID

EOY24859.1

Protein Name

Transducin/WD40 repeat-like superfamily protein isoform 1

Genbank Nucleotide ID

CM001881

Gene Name

TCM_047023

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_047023	EOY24859	EOY24859

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-07	31.2	504	548

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf............sdtllvsGsdDgtikvWDlrtgvl 35
           H + + cla             s   lvsGs D+ti++WDl++g+l
   Q: 504  HMGAILCLAAhrmvgaakgwsfS-QVLVSGSMDCTIRIWDLDSGNL 548
           66666666544556665554533.679**************99986 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MKCRSVACIW SGTPPVHRVT ATAALNHPPT LYTGGSDGSI LWWNLSNSDS HSEIKPIAML 60
CGHAAPIADL GICCPIVVSG EQNTDYSKVV ATAGVEESCL QSAEGGEISM DKESQNRKPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACTAGGTTC AGCCGGAGCA AAGGAATTTG AGAACTTCAT TTGCAGTCGG CTGTTGCATT 60
TTTTCACAAC CATTTTTCCC CAATCGGCTT CGGCCCACCA AGCCCTTCTA TCTCCTCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR016024--ARM-type_fold
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000634	Aegilops tauschii	38.95	9.00e-134	470.00
IUUC-Aml-001481	Ailuropoda melanoleuca	21.50	6.00e-15	76.60
IUUC-Atr-002981	Amborella trichopoda	50.00	0.00e+00	1129.00
IUUC-Apl-003943	Anas platyrhynchos	22.17	2.00e-15	77.40
IUUC-Aca-005145	Anolis carolinensis	22.21	2.00e-15	78.20
IUUC-Aly-005882	Arabidopsis lyrata	56.41	0.00e+00	1335.00
IUUC-Ath-006797	Arabidopsis thaliana	53.66	0.00e+00	1372.00
IUUC-Ame-011180	Astyanax mexicanus	22.70	1.00e-14	75.50
IUUC-Bta-012912	Bos taurus	21.79	3.00e-15	77.40
IUUC-Bol-016538	Brassica oleracea	55.95	0.00e+00	1309.00
IUUC-Bra-018098	Brassica rapa	49.94	0.00e+00	722.00
IUUC-Cel-018565	Caenorhabditis elegans	26.19	7.00e-10	59.70
IUUC-Cja-019970	Callithrix jacchus	21.26	3.00e-15	77.40
IUUC-Cfa-020677	Canis familiaris	21.50	4.00e-15	77.00
IUUC-Cpo-021408	Cavia porcellus	21.50	7.00e-15	76.30
IUUC-Csa-023786	Chlorocebus sabaeus	21.26	3.00e-15	77.40
IUUC-Cho-024612	Choloepus hoffmanni	22.43	4.00e-15	77.00
IUUC-Cin-025255	Ciona intestinalis	26.71	1.00e-12	68.90
IUUC-Csv-026361	Ciona savignyi	22.83	3.00e-14	73.90
IUUC-Cne-026981	Cryptococcus neoformans	19.92	8.00e-11	62.80
IUUC-Dre-027951	Danio rerio	27.21	2.00e-09	56.60
IUUC-Dno-029072	Dasypus novemcinctus	21.03	6.00e-15	76.60
IUUC-Dor-030771	Dipodomys ordii	26.71	2.00e-09	58.20
IUUC-Dme-031768	Drosophila melanogaster	25.78	6.00e-13	70.10
IUUC-Ete-032492	Echinops telfairi	23.13	6.00e-14	73.20
IUUC-Eca-033496	Equus caballus	21.50	6.00e-15	76.30
IUUC-Fca-035530	Felis catus	21.94	4.00e-15	77.00
IUUC-Fal-037238	Ficedula albicollis	23.55	2.00e-11	64.70
IUUC-Gmo-039528	Gadus morhua	20.88	1.00e-16	82.00
IUUC-Gga-041043	Gallus gallus	22.61	6.00e-16	79.30
IUUC-Gac-042524	Gasterosteus aculeatus	21.07	2.00e-12	68.20
IUUC-Gma-043201	Glycine max	57.29	0.00e+00	1550.00
IUUC-Ggo-045112	Gorilla gorilla	21.26	3.00e-15	77.40
IUUC-Hsa-046732	Homo sapiens	21.26	3.00e-15	77.40
IUUC-Itr-048340	Ictidomys tridecemlineatus	26.79	9.00e-13	67.40
IUUC-Lch-050643	Latimeria chalumnae	21.94	9.00e-15	75.50
IUUC-Lpe-051544	Leersia perrieri	47.34	0.00e+00	1102.00
IUUC-Loc-051774	Lepisosteus oculatus	22.01	7.00e-14	72.80
IUUC-Laf-054349	Loxodonta africana	21.73	2.00e-15	78.20
IUUC-Mcc-055800	Macaca mulatta	21.26	3.00e-15	77.40
IUUC-Meu-056091	Macropus eugenii	22.08	5.00e-12	66.60
IUUC-Mtr-058676	Medicago truncatula	55.50	0.00e+00	1523.00
IUUC-Mga-060096	Meleagris gallopavo	21.93	3.00e-10	60.10
IUUC-Mmr-061271	Microcebus murinus	21.50	5.00e-15	76.60
IUUC-Mdo-062622	Monodelphis domestica	22.25	7.00e-15	76.30
IUUC-Mmu-063262	Mus musculus	21.46	2.00e-14	74.70
IUUC-Mac-065659	Musa acuminata	50.53	0.00e+00	1166.00
IUUC-Mpu-066523	Mustela putorius furo	21.82	9.00e-15	75.90
IUUC-Mlu-067288	Myotis lucifugus	22.66	3.00e-15	77.40
IUUC-Nle-069610	Nomascus leucogenys	21.96	5.00e-15	76.60
IUUC-Opr-070413	Ochotona princeps	26.71	2.00e-09	58.50
IUUC-Ont-072199	Oreochromis niloticus	21.55	2.00e-12	68.20
IUUC-Oan-073095	Ornithorhynchus anatinus	23.13	1.00e-15	78.60
IUUC-Ocu-074257	Oryctolagus cuniculus	21.35	3.00e-15	77.40
IUUC-Oba-075713	Oryza barthii	48.61	0.00e+00	1102.00
IUUC-Obr-076894	Oryza brachyantha	46.59	0.00e+00	1093.00
IUUC-Ogl-077521	Oryza glaberrima	48.66	0.00e+00	1108.00
IUUC-Ogu-078103	Oryza glumaepatula	47.45	0.00e+00	1118.00
IUUC-Oin-080169	Oryza indica	48.66	0.00e+00	1110.00
IUUC-Olo-080818	Oryza longistaminata	44.94	0.00e+00	1005.00
IUUC-Ome-081902	Oryza meridionalis	47.52	0.00e+00	1123.00
IUUC-Oni-082333	Oryza nivara	48.66	0.00e+00	1107.00
IUUC-Opu-083952	Oryza punctata	48.55	0.00e+00	1104.00
IUUC-Oru-085112	Oryza rufipogon	48.96	0.00e+00	1106.00
IUUC-Osa-085615	Oryza sativa	42.61	2.00e-142	498.00
IUUC-Ola-087177	Oryzias latipes	21.55	4.00e-13	70.50
IUUC-Olu-087828	Ostreococcus lucimarinus	30.26	3.00e-22	100.00
IUUC-Oga-088290	Otolemur garnettii	21.79	9.00e-14	72.40
IUUC-Oar-089575	Ovis aries	21.84	5.00e-16	80.10
IUUC-Ptr-091041	Pan troglodytes	21.26	3.00e-15	77.40
IUUC-Pan-092048	Papio anubis	21.26	3.00e-15	77.40
IUUC-Psi-093637	Pelodiscus sinensis	21.14	3.00e-16	80.90
IUUC-Pma-094117	Petromyzon marinus	32.41	3.00e-10	59.70
IUUC-Pfo-096529	Poecilia formosa	22.06	5.00e-15	76.60
IUUC-Pab-098194	Pongo abelii	21.50	3.00e-15	77.40
IUUC-Pop-099546	Populus trichocarpa	65.21	0.00e+00	1709.00
IUUC-Ppe-101653	Prunus persica	65.80	0.00e+00	1704.00
IUUC-Pva-102803	Pteropus vampyrus	21.96	4.00e-15	77.00
IUUC-Rno-105904	Rattus norvegicus	21.09	4.00e-14	73.60
IUUC-Sha-106926	Sarcophilus harrisii	22.25	3.00e-15	77.00
IUUC-Smo-109304	Selaginella moellendorffii	37.28	8.00e-91	328.00
IUUC-Sit-110049	Setaria italica	39.19	3.00e-143	501.00
IUUC-Sly-111516	Solanum lycopersicum	54.23	0.00e+00	1418.00
IUUC-Stu-111982	Solanum tuberosum	54.78	0.00e+00	1338.00
IUUC-Sar-113730	Sorex araneus	22.48	2.00e-14	74.70
IUUC-Sbi-114887	Sorghum bicolor	47.10	4.00e-109	388.00
IUUC-Ssc-116213	Sus scrofa	21.11	9.00e-15	75.10
IUUC-Tgu-117297	Taeniopygia guttata	22.61	9.00e-15	75.90
IUUC-Tru-117887	Takifugu rubripes	21.31	2.00e-12	68.20
IUUC-Tsy-118970	Tarsius syrichta	22.27	8.00e-15	75.90
IUUC-Tni-119791	Tetraodon nigroviridis	28.47	7.00e-12	65.10
IUUC-Tae-123628	Triticum aestivum	47.42	0.00e+00	1114.00
IUUC-Tur-125959	Triticum urartu	40.38	1.00e-144	506.00
IUUC-Tbe-127847	Tupaia belangeri	26.71	3.00e-09	57.80
IUUC-Ttr-128200	Tursiops truncatus	23.79	5.00e-13	70.10
IUUC-Vpa-130178	Vicugna pacos	21.31	4.00e-15	77.00
IUUC-Xtr-132699	Xenopus tropicalis	21.25	1.00e-13	71.60
IUUC-Xma-133180	Xiphophorus maculatus	21.79	4.00e-13	69.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence