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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-006611
UUCD1 version UUC-ArT-00535
Ensembl Protein ID AT3G48030.1
UniProt Accession Q7X843; Q9SU66; ATL48_ARATH
Genbank Protein ID BAC75820.1; CAB41136.1; AEE78358.1; AAP40393.1; AAP40486.1
Protein Name RING-H2 finger protein ATL48; RING-type E3 ubiquitin transferase ATL48; YGHL1-C3HC4 RING fusion protein
Genbank Nucleotide ID AB099346; AL049658; CP002686; BT008566; BT008679
Gene Name ATL48; At3g48030; T17F15.100
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G48030 AT3G48030.1 AT3G48030.1
AT3G48030 AT3G48030.2 AT3G48030.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Post-translational Modifications (PTMs)
UniProt
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 1.60e-08 35.8 207 249
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   +  +++lp C H+fh++C+  w         + +CPlCr
   Q: 207  CAVCLNEFsdtD-KLRLLPvCSHAFHLHCIDTW------LLSNSTCPLCR 249
           ********7733.499999**************......888889****8 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MSSVEPDMED LFQEKKRVRN PLVPLGALMT AGVLTAGLIS FRRGNSQLGQ VLMRARVVVQ 60
GATVALMVGT GYYYGDNPWK KLLLSEIHET EALSPKSSSA ATLTLMNQKD PSSSSIVSVL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006611|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAGTTCGG TAGAACCAGA CATGGAAGAT CTGTTCCAGG AGAAGAAGCG TGTCAGGAAT 60
CCTCTCGTTC CTCTCGGTTT GTGTCTTCTT CATTTCCTCT TTCTTCTGAT CTCATTTCAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006611|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0007--Acetylation
KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR007667--Hypoxia_induced_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51503--HIG1
PS50089--ZF_RING_2
Pfam

PF04588--HIG_1_N
PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
KEGG ath:AT3G48030
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001193 Ailuropoda melanoleuca 44.57 1.00e-17 84.30
IUUC-Apl-003834 Anas platyrhynchos 42.42 6.00e-19 88.60
IUUC-Aca-004373 Anolis carolinensis 50.00 6.00e-16 78.60
IUUC-Aly-005870 Arabidopsis lyrata 93.39 3.00e-178 616.00
IUUC-Ame-011730 Astyanax mexicanus 43.96 4.00e-20 92.80
IUUC-Cpo-022086 Cavia porcellus 42.53 1.00e-15 77.80
IUUC-Csa-023246 Chlorocebus sabaeus 39.39 4.00e-16 79.30
IUUC-Cho-024749 Choloepus hoffmanni 40.91 6.00e-15 75.10
IUUC-Dre-028428 Danio rerio 44.21 4.00e-20 92.80
IUUC-Dno-029606 Dasypus novemcinctus 41.11 1.00e-15 77.80
IUUC-Dor-030800 Dipodomys ordii 39.80 4.00e-15 75.90
IUUC-Ete-033099 Echinops telfairi 41.94 4.00e-16 79.00
IUUC-Fca-035572 Felis catus 42.57 2.00e-17 83.60
IUUC-Fal-036981 Ficedula albicollis 43.43 1.00e-19 91.30
IUUC-Gmo-039344 Gadus morhua 43.96 7.00e-20 91.70
IUUC-Gga-041114 Gallus gallus 42.42 6.00e-19 89.00
IUUC-Gac-042220 Gasterosteus aculeatus 43.96 2.00e-19 89.70
IUUC-Ggo-044902 Gorilla gorilla 40.21 5.00e-16 79.00
IUUC-Hsa-046548 Homo sapiens 40.40 2.00e-16 80.50
IUUC-Lch-050541 Latimeria chalumnae 43.16 4.00e-20 92.40
IUUC-Loc-052124 Lepisosteus oculatus 42.86 8.00e-17 81.60
IUUC-Mcc-054858 Macaca mulatta 39.39 5.00e-16 79.00
IUUC-Mga-059307 Meleagris gallopavo 41.41 6.00e-18 85.50
IUUC-Mdo-062162 Monodelphis domestica 41.41 1.00e-17 84.30
IUUC-Mmu-064278 Mus musculus 42.11 1.00e-15 77.80
IUUC-Mpu-065838 Mustela putorius furo 46.24 5.00e-18 85.50
IUUC-Nle-069127 Nomascus leucogenys 39.39 5.00e-16 79.00
IUUC-Ont-072086 Oreochromis niloticus 43.96 7.00e-19 88.60
IUUC-Oan-073036 Ornithorhynchus anatinus 41.57 2.00e-15 77.00
IUUC-Ola-087452 Oryzias latipes 42.86 3.00e-18 86.30
IUUC-Oga-088022 Otolemur garnettii 40.40 2.00e-16 80.50
IUUC-Ptr-091533 Pan troglodytes 40.40 2.00e-16 80.50
IUUC-Pan-092675 Papio anubis 39.39 5.00e-16 79.00
IUUC-Psi-093735 Pelodiscus sinensis 42.00 2.00e-17 84.00
IUUC-Pno-095054 Phaeosphaeria nodorum 50.00 1.00e-10 60.50
IUUC-Pfo-096637 Poecilia formosa 43.96 2.00e-19 90.50
IUUC-Pab-098486 Pongo abelii 40.82 2.00e-16 80.10
IUUC-Pca-100263 Procavia capensis 41.57 6.00e-16 78.60
IUUC-Sha-106681 Sarcophilus harrisii 40.40 5.00e-17 82.40
IUUC-Tgu-117477 Taeniopygia guttata 43.43 5.00e-20 92.00
IUUC-Tru-118302 Takifugu rubripes 43.62 1.00e-19 90.90
IUUC-Tsy-119338 Tarsius syrichta 40.40 4.00e-16 79.30
IUUC-Tni-119675 Tetraodon nigroviridis 43.62 8.00e-20 91.30
IUUC-Xtr-132663 Xenopus tropicalis 41.11 1.00e-15 77.40
Created Date 25-Jun-2017

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