iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-053523

Ensembl Protein ID

ENSLAFP00000005699.3

UniProt Accession

G3SYU6; G3SYU6_LOXAF

Protein Name

Uncharacterized protein

Gene Name

NXF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000006778.3	ENSLAFT00000006781.3	ENSLAFP00000005699.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	23.06	1.00e-10	62.80	IUUC-Sce-106429

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MADEGKSYSE HDDRVSLPRR RKGRGPFRWN YGEGNRRSGR GGSGTRSSRL GEDDGDVAMV 60
DAQDGPRVRY NPYAARPNRR GDNWHDRGRI HVTVRRDRAP PERGAAGTSQ DGTSKNWFKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGACG AGGGGAAGTC GTACAGCGGT GAGTGCTGGT CCTCGGGCGG CGGAGCGGGG 60
CGATCCGGGG CCGGGGTGGG CGGCGCCGGC CTAGGCCTCA GCGCCGGGGC GTGAGGCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR002075--NTF2
IPR032710--NTF2-like_dom
IPR018222--Nuclear_transport_factor_2_euk
IPR012677--Nucleotide-bd_a/b_plait
IPR030217--NXF_fam
IPR000504--RRM_dom
IPR005637--TAP_C_dom
IPR015245--Tap_RNA-bd
IPR009060--UBA-like

PROSITE

PS51450--LRR
PS50177--NTF2_DOMAIN
PS51281--TAP_C

Pfam

PF02136--NTF2
PF09162--Tap-RNA_bind
PF03943--TAP_C

SMART

SM00804--TAP_C

Gene Ontology

GO:0005737--C:cytoplasm
GO:0042405--C:nuclear inclusion body
GO:0005643--C:nuclear pore
GO:0016607--C:nuclear speck
GO:0000346--C:transcription export complex
GO:0003729--F:mRNA binding
GO:0005487--F:nucleocytoplasmic transporter activity
GO:0000166--F:nucleotide binding
GO:0003727--F:single-stranded RNA binding
GO:0016973--P:poly(A)+ mRNA export from nucleus

KEGG

lav:100675234

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001516	Ailuropoda melanoleuca	90.13	0.00e+00	1053.00
IUUC-Apl-003526	Anas platyrhynchos	34.09	1.00e-02	33.50
IUUC-Aca-005187	Anolis carolinensis	65.87	0.00e+00	759.00
IUUC-Ago-007780	Ashbya gossypii	22.98	7.00e-18	85.50
IUUC-Acl-008191	Aspergillus clavatus	25.32	1.00e-23	104.00
IUUC-Afl-008512	Aspergillus flavus	26.55	4.00e-27	116.00
IUUC-Afu-009048	Aspergillus fumigatus	25.81	5.00e-27	115.00
IUUC-Ani-009320	Aspergillus nidulans	24.16	3.00e-17	83.60
IUUC-Ang-009834	Aspergillus niger	25.05	2.00e-22	100.00
IUUC-Aor-010039	Aspergillus oryzae	26.10	2.00e-23	103.00
IUUC-Ate-010321	Aspergillus terreus	25.85	9.00e-22	98.60
IUUC-Ame-011034	Astyanax mexicanus	58.97	0.00e+00	657.00
IUUC-Bgr-012142	Blumeria graminis	27.37	2.00e-20	94.40
IUUC-Bta-013268	Bos taurus	90.81	0.00e+00	1035.00
IUUC-Bci-013951	Botrytis cinerea	27.61	2.00e-23	103.00
IUUC-Cel-018213	Caenorhabditis elegans	32.58	1.70e-02	32.70
IUUC-Cja-019064	Callithrix jacchus	92.25	0.00e+00	1063.00
IUUC-Cfa-020712	Canis familiaris	90.21	0.00e+00	1013.00
IUUC-Cpo-021814	Cavia porcellus	92.07	0.00e+00	1064.00
IUUC-Csa-023652	Chlorocebus sabaeus	93.21	0.00e+00	1075.00
IUUC-Cho-024546	Choloepus hoffmanni	48.48	1.00e-01	30.40
IUUC-Cin-025669	Ciona intestinalis	34.93	2.00e-96	346.00
IUUC-Csv-025957	Ciona savignyi	35.79	7.00e-88	317.00
IUUC-Cgl-026395	Colletotrichum gloeosporioides	27.88	1.00e-28	121.00
IUUC-Cne-026967	Cryptococcus neoformans	21.80	3.00e-05	43.10
IUUC-Dre-028476	Danio rerio	55.16	2.00e-153	535.00
IUUC-Dno-029301	Dasypus novemcinctus	92.72	0.00e+00	1053.00
IUUC-Dor-030764	Dipodomys ordii	91.44	0.00e+00	1064.00
IUUC-Dse-031489	Dothistroma septosporum	24.33	2.00e-17	84.00
IUUC-Dme-031623	Drosophila melanogaster	32.32	1.00e-79	290.00
IUUC-Ete-032992	Echinops telfairi	80.62	0.00e+00	833.00
IUUC-Eca-033208	Equus caballus	93.56	0.00e+00	1018.00
IUUC-Eeu-034759	Erinaceus europaeus	89.97	0.00e+00	1050.00
IUUC-Fca-035671	Felis catus	92.23	0.00e+00	1068.00
IUUC-Fal-036625	Ficedula albicollis	34.09	1.50e-02	33.10
IUUC-Fox-037892	Fusarium oxysporum	28.23	7.00e-22	99.00
IUUC-Fso-038402	Fusarium solani	26.18	4.00e-20	93.20
IUUC-Gmo-039325	Gadus morhua	55.75	3.00e-154	538.00
IUUC-Ggr-039736	Gaeumannomyces graminis	25.00	3.00e-13	70.50
IUUC-Gga-040508	Gallus gallus	73.01	0.00e+00	806.00
IUUC-Gac-041798	Gasterosteus aculeatus	58.54	0.00e+00	708.00
IUUC-Ggo-044655	Gorilla gorilla	92.76	0.00e+00	1040.00
IUUC-Hsa-047028	Homo sapiens	93.05	0.00e+00	1074.00
IUUC-Itr-048415	Ictidomys tridecemlineatus	89.66	0.00e+00	1056.00
IUUC-Kpa-049280	Komagataella pastoris	22.84	7.00e-21	95.50
IUUC-Lch-049501	Latimeria chalumnae	70.22	0.00e+00	842.00
IUUC-Loc-052299	Lepisosteus oculatus	64.34	5.00e-175	607.00
IUUC-Mcc-055389	Macaca mulatta	93.92	0.00e+00	1011.00
IUUC-Meu-056620	Macropus eugenii	57.67	1.00e-141	495.00
IUUC-Mor-057232	Magnaporthe oryzae	28.03	5.00e-27	115.00
IUUC-Mpo-057539	Magnaporthe poae	23.69	4.00e-11	63.20
IUUC-Mla-059053	Melampsora laricipopulina	26.18	1.00e-26	114.00
IUUC-Mga-059220	Meleagris gallopavo	34.09	1.00e-02	33.50
IUUC-Mvi-060283	Microbotryum violaceum	26.06	5.00e-21	95.90
IUUC-Mmr-061583	Microcebus murinus	94.01	0.00e+00	1086.00
IUUC-Mdo-062158	Monodelphis domestica	83.09	0.00e+00	967.00
IUUC-Mmu-064202	Mus musculus	88.67	0.00e+00	1003.00
IUUC-Mpu-065730	Mustela putorius furo	90.94	0.00e+00	1055.00
IUUC-Mlu-066975	Myotis lucifugus	89.68	0.00e+00	994.00
IUUC-Nfi-068368	Neosartorya fischeri	25.81	3.00e-25	110.00
IUUC-Ncr-068724	Neurospora crassa	25.49	8.00e-16	78.60
IUUC-Nle-069816	Nomascus leucogenys	92.73	0.00e+00	1066.00
IUUC-Opr-070244	Ochotona princeps	44.52	6.00e-131	461.00
IUUC-Ont-072608	Oreochromis niloticus	59.21	0.00e+00	723.00
IUUC-Oan-073580	Ornithorhynchus anatinus	33.63	5.00e-03	34.70
IUUC-Ocu-074226	Oryctolagus cuniculus	90.79	0.00e+00	1102.00
IUUC-Ola-087008	Oryzias latipes	65.41	0.00e+00	690.00
IUUC-Oga-088317	Otolemur garnettii	89.53	0.00e+00	986.00
IUUC-Oar-089720	Ovis aries	90.48	0.00e+00	1008.00
IUUC-Ptr-091148	Pan troglodytes	93.05	0.00e+00	1074.00
IUUC-Pan-091764	Papio anubis	92.89	0.00e+00	1072.00
IUUC-Psi-094071	Pelodiscus sinensis	68.57	0.00e+00	820.00
IUUC-Pno-095045	Phaeosphaeria nodorum	23.78	2.00e-04	40.00
IUUC-Pfo-096500	Poecilia formosa	60.99	0.00e+00	743.00
IUUC-Pab-098014	Pongo abelii	91.60	0.00e+00	1070.00
IUUC-Pca-100121	Procavia capensis	93.68	0.00e+00	1063.00
IUUC-Pva-102865	Pteropus vampyrus	91.59	0.00e+00	1013.00
IUUC-Pgr-103333	Puccinia graminis	24.24	2.00e-16	80.90
IUUC-Ptt-103702	Puccinia triticina	24.34	4.00e-20	92.80
IUUC-Pte-104388	Pyrenophora teres	22.70	7.00e-03	34.70
IUUC-Rno-106100	Rattus norvegicus	89.48	0.00e+00	1023.00
IUUC-Sce-106429	Saccharomyces cerevisiae	23.59	4.00e-14	73.20
IUUC-Sha-106834	Sarcophilus harrisii	82.69	0.00e+00	986.00
IUUC-Sja-107818	Schizosaccharomyces japonicus	26.18	8.00e-22	98.60
IUUC-Spo-108301	Schizosaccharomyces pombe	27.41	2.00e-34	140.00
IUUC-Ssl-108512	Sclerotinia sclerotiorum	25.88	1.00e-22	101.00
IUUC-Sar-112963	Sorex araneus	46.34	2.00e-127	449.00
IUUC-Sre-114950	Sporisorium reilianum	23.35	1.00e-20	95.10
IUUC-Ssc-116010	Sus scrofa	91.45	0.00e+00	1001.00
IUUC-Tgu-116603	Taeniopygia guttata	35.23	5.00e-03	34.70
IUUC-Tru-118148	Takifugu rubripes	59.90	0.00e+00	711.00
IUUC-Tsy-119506	Tarsius syrichta	35.05	7.00e-05	40.40
IUUC-Tni-120552	Tetraodon nigroviridis	41.51	2.00e-03	35.80
IUUC-Tre-121894	Trichoderma reesei	26.87	2.00e-27	117.00
IUUC-Tvi-122501	Trichoderma virens	28.35	3.00e-32	133.00
IUUC-Tme-127084	Tuber melanosporum	25.64	5.00e-28	119.00
IUUC-Tbe-127980	Tupaia belangeri	64.20	2.00e-90	325.00
IUUC-Ttr-128656	Tursiops truncatus	58.22	0.00e+00	681.00
IUUC-Uma-129530	Ustilago maydis	24.05	1.00e-26	115.00
IUUC-Vda-129709	Verticillium dahliae	27.23	3.00e-23	103.00
IUUC-Vpa-130739	Vicugna pacos	46.78	5.00e-105	374.00
IUUC-Xtr-132404	Xenopus tropicalis	60.83	0.00e+00	746.00
IUUC-Xma-133051	Xiphophorus maculatus	59.87	0.00e+00	720.00
IUUC-Yli-134681	Yarrowia lipolytica	23.48	5.00e-26	112.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence