iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000015798.1	ENSAMET00000017362.1	ENSAMEP00000016673.1
ENSAMEG00000015798.1	ENSAMET00000017373.1	ENSAMEP00000016684.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-18	66.1	1568	1608
UBD/Beta-Prp	2.90e-42	145.0	1668	1802

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtl...lvsGsdDgtikvWDlrtgvll 36
           gH+++v+cl     s+     l +Gs D+ti++++++t  ++
   Q: 1568 GHASKVNCLLVtqtSG-KnaaLYTGSSDHTIRCYNVKTRECV 1608
           8*******95587533.24579**************998886 PP

UBD/Beta-Prp

   S: 21   dksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgd 107
            ++ll++gs+d ti v d+++g llr+l+gh++++ ++k  +d  +  +gs+D+ ++  ++ tg+ v+++kgh++ v+ +++    +
   Q: 1668 ARKLLVVGSYDCTISVRDARNGLLLRTLEGHSKTILCMKVVND--LVFSGSSDQSVHAHNIHTGELVRIYKGHNHAVTVVNILG--K 1750
           5689***************************************..9*************************************9..* PP
   S: 108  klvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvr 162
           ++v++  d+ +rv++l++   l+ +  gh+++++c+++h+  +++ +G++D+ ++
   Q: 1751 VMVTACLDKFVRVYELQSHDRLQ-VYGGHKDMIMCMTIHK--SMIYTGCYDGSIQ 1802
           ***********************.****************..**********997 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MPVARIECPS SPSFPRDSSH ECRVCGVTEV GLSAYAKHIS SQLHKDNVDA QEREDDGKGE 60
EEEEDYFDKE LVQLIKQRKE QSRQDEPSNS SQEINSDDRR PQWRREDRIP YQDRENYSQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTACGAG AACGAAAATG CATATTGTGC CACATTGTAT ACAGCTCAAA AAAGGTAATA 60
AATACATAGA AGAGGGAGAA TCTGAGGCTT TATGACTGAT CTTTTTTTTT TTTTTCAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR018391--PQQ_beta_propeller_repeat
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF00400--WD40

SMART

SM00564--PQQ
SM00320--WD40
SM00355--ZnF_C2H2

Gene Ontology

GO:0046872--F:metal ion binding
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003674	Anas platyrhynchos	57.58	0.00e+00	1712.00
IUUC-Aca-005018	Anolis carolinensis	53.45	0.00e+00	1632.00
IUUC-Ame-011431	Astyanax mexicanus	68.80	0.00e+00	683.00
IUUC-Bta-013436	Bos taurus	87.85	0.00e+00	3105.00
IUUC-Cfa-020278	Canis familiaris	92.99	0.00e+00	2839.00
IUUC-Cpo-022278	Cavia porcellus	78.77	0.00e+00	2776.00
IUUC-Csa-023115	Chlorocebus sabaeus	83.98	0.00e+00	1802.00
IUUC-Cho-024829	Choloepus hoffmanni	80.43	0.00e+00	2182.00
IUUC-Dre-028112	Danio rerio	65.39	0.00e+00	668.00
IUUC-Dno-029127	Dasypus novemcinctus	84.49	0.00e+00	2945.00
IUUC-Dor-030367	Dipodomys ordii	81.07	0.00e+00	1213.00
IUUC-Ete-032500	Echinops telfairi	72.60	0.00e+00	1288.00
IUUC-Eca-034319	Equus caballus	90.17	0.00e+00	3155.00
IUUC-Eeu-034754	Erinaceus europaeus	77.11	0.00e+00	2426.00
IUUC-Fca-036181	Felis catus	92.45	0.00e+00	3281.00
IUUC-Fal-036865	Ficedula albicollis	55.18	0.00e+00	1578.00
IUUC-Gmo-039227	Gadus morhua	64.47	9.00e-176	610.00
IUUC-Gga-041178	Gallus gallus	56.63	0.00e+00	1727.00
IUUC-Gac-042209	Gasterosteus aculeatus	64.81	3.00e-168	585.00
IUUC-Ggo-044636	Gorilla gorilla	86.69	0.00e+00	3091.00
IUUC-Hsa-045949	Homo sapiens	87.94	0.00e+00	3138.00
IUUC-Itr-048628	Ictidomys tridecemlineatus	85.89	0.00e+00	3058.00
IUUC-Lch-049753	Latimeria chalumnae	49.72	0.00e+00	1457.00
IUUC-Loc-052333	Lepisosteus oculatus	69.00	0.00e+00	723.00
IUUC-Laf-053530	Loxodonta africana	82.70	0.00e+00	2987.00
IUUC-Mcc-054664	Macaca mulatta	87.52	0.00e+00	3082.00
IUUC-Meu-056609	Macropus eugenii	66.30	0.00e+00	1204.00
IUUC-Mga-059632	Meleagris gallopavo	56.96	0.00e+00	1694.00
IUUC-Mmr-060742	Microcebus murinus	87.10	0.00e+00	3090.00
IUUC-Mdo-061831	Monodelphis domestica	80.77	0.00e+00	1315.00
IUUC-Mmu-064055	Mus musculus	75.64	0.00e+00	2513.00
IUUC-Mpu-066458	Mustela putorius furo	95.27	0.00e+00	1638.00
IUUC-Mlu-067767	Myotis lucifugus	85.61	0.00e+00	3010.00
IUUC-Nle-069728	Nomascus leucogenys	87.52	0.00e+00	3112.00
IUUC-Opr-070914	Ochotona princeps	78.42	0.00e+00	2727.00
IUUC-Ont-072353	Oreochromis niloticus	68.20	0.00e+00	645.00
IUUC-Ocu-073827	Oryctolagus cuniculus	85.24	0.00e+00	2920.00
IUUC-Ola-087573	Oryzias latipes	67.68	7.00e-162	564.00
IUUC-Oga-088664	Otolemur garnettii	87.22	0.00e+00	1808.00
IUUC-Oar-090256	Ovis aries	84.37	0.00e+00	2390.00
IUUC-Ptr-090884	Pan troglodytes	85.91	0.00e+00	2608.00
IUUC-Pan-091779	Papio anubis	83.81	0.00e+00	1797.00
IUUC-Psi-093267	Pelodiscus sinensis	93.45	8.00e-166	575.00
IUUC-Pma-094414	Petromyzon marinus	43.84	6.00e-60	226.00
IUUC-Pfo-097009	Poecilia formosa	64.23	3.00e-159	556.00
IUUC-Pca-100820	Procavia capensis	78.35	0.00e+00	2208.00
IUUC-Pva-103044	Pteropus vampyrus	81.98	0.00e+00	1268.00
IUUC-Rno-105960	Rattus norvegicus	69.55	0.00e+00	2298.00
IUUC-Sar-113018	Sorex araneus	74.78	0.00e+00	1343.00
IUUC-Ssc-115278	Sus scrofa	87.90	0.00e+00	3127.00
IUUC-Tgu-117231	Taeniopygia guttata	54.89	0.00e+00	1615.00
IUUC-Tru-118472	Takifugu rubripes	55.15	3.00e-165	576.00
IUUC-Tsy-118877	Tarsius syrichta	82.87	0.00e+00	2017.00
IUUC-Tni-119881	Tetraodon nigroviridis	57.06	2.00e-177	616.00
IUUC-Tbe-127499	Tupaia belangeri	78.73	0.00e+00	1579.00
IUUC-Ttr-128962	Tursiops truncatus	88.31	0.00e+00	3095.00
IUUC-Vpa-130089	Vicugna pacos	83.19	0.00e+00	1377.00
IUUC-Xtr-132940	Xenopus tropicalis	46.77	0.00e+00	1333.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence